BLASTX nr result
ID: Lithospermum22_contig00046374
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lithospermum22_contig00046374
(224 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002278218.1| PREDICTED: pentatricopeptide repeat-containi... 111 5e-23
ref|XP_002526160.1| pentatricopeptide repeat-containing protein,... 100 1e-19
ref|XP_003540559.1| PREDICTED: pentatricopeptide repeat-containi... 100 2e-19
ref|XP_002307479.1| predicted protein [Populus trichocarpa] gi|2... 100 2e-19
gb|ADN34182.1| pentatricopeptide repeat-containing protein [Cucu... 94 9e-18
>ref|XP_002278218.1| PREDICTED: pentatricopeptide repeat-containing protein At3g09040,
mitochondrial [Vitis vinifera]
gi|302142763|emb|CBI19966.3| unnamed protein product
[Vitis vinifera]
Length = 1048
Score = 111 bits (278), Expect = 5e-23
Identities = 51/74 (68%), Positives = 64/74 (86%)
Frame = -2
Query: 223 AKCGSLDDANQQFELLTTRDHISWNAIIVGYVQEAEEDEAFSLFQRMMLDGIAPDEVSLA 44
AKCG+L++A QQFE + RD++SWNAIIVGYVQE +EDEAF++F+RM+LDGIAPDEVSLA
Sbjct: 496 AKCGALEEARQQFEFIRNRDNVSWNAIIVGYVQEEDEDEAFNMFRRMILDGIAPDEVSLA 555
Query: 43 SILSACAGTKAFAE 2
SILS CA +A +
Sbjct: 556 SILSGCANLQALEQ 569
Score = 65.1 bits (157), Expect = 6e-09
Identities = 28/68 (41%), Positives = 44/68 (64%)
Frame = -2
Query: 223 AKCGSLDDANQQFELLTTRDHISWNAIIVGYVQEAEEDEAFSLFQRMMLDGIAPDEVSLA 44
+KCGSL DA + F+ + D +SW A+I GYVQ +EA +F+ M G+ PD+V+
Sbjct: 228 SKCGSLVDARKIFDAVVDPDTVSWTAMIAGYVQVGLPEEALKVFEDMQKLGLVPDQVAFV 287
Query: 43 SILSACAG 20
++++AC G
Sbjct: 288 TVITACVG 295
Score = 59.3 bits (142), Expect = 3e-07
Identities = 29/67 (43%), Positives = 41/67 (61%)
Frame = -2
Query: 220 KCGSLDDANQQFELLTTRDHISWNAIIVGYVQEAEEDEAFSLFQRMMLDGIAPDEVSLAS 41
KCG+++ A F + +R +S NAII GY Q + EA LFQ M +G+ P E++ AS
Sbjct: 598 KCGAIEAARYVFSCMPSRSVVSMNAIIAGYAQN-DLVEAIDLFQEMQNEGLNPSEITFAS 656
Query: 40 ILSACAG 20
+L AC G
Sbjct: 657 LLDACTG 663
Score = 55.1 bits (131), Expect = 6e-06
Identities = 27/67 (40%), Positives = 37/67 (55%)
Frame = -2
Query: 223 AKCGSLDDANQQFELLTTRDHISWNAIIVGYVQEAEEDEAFSLFQRMMLDGIAPDEVSLA 44
AKC ++ A + F+ L R+ + WNA++ GY Q + LF M G PDE +
Sbjct: 395 AKCEKMEAAKKVFDALDERNLVLWNAMLGGYAQNGYASKVMKLFSEMRGCGFWPDEFTYT 454
Query: 43 SILSACA 23
SILSACA
Sbjct: 455 SILSACA 461
>ref|XP_002526160.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis] gi|223534537|gb|EEF36236.1| pentatricopeptide
repeat-containing protein, putative [Ricinus communis]
Length = 762
Score = 100 bits (249), Expect = 1e-19
Identities = 49/74 (66%), Positives = 60/74 (81%)
Frame = -2
Query: 223 AKCGSLDDANQQFELLTTRDHISWNAIIVGYVQEAEEDEAFSLFQRMMLDGIAPDEVSLA 44
AK G L+DA +QFEL+ +RD++SWNAIIVGYVQE +E EAF +FQ+M L GI PDEVSLA
Sbjct: 332 AKSGFLEDARKQFELMKSRDNVSWNAIIVGYVQEEDEVEAFLMFQKMHLVGILPDEVSLA 391
Query: 43 SILSACAGTKAFAE 2
SILSACA + F +
Sbjct: 392 SILSACANVEGFEQ 405
Score = 54.7 bits (130), Expect = 8e-06
Identities = 27/67 (40%), Positives = 36/67 (53%)
Frame = -2
Query: 223 AKCGSLDDANQQFELLTTRDHISWNAIIVGYVQEAEEDEAFSLFQRMMLDGIAPDEVSLA 44
AKC L+ A + F+ + R+ + WNA++ GY Q E L M G PDE +
Sbjct: 231 AKCKELEAAKKVFDPIDERNVVLWNAMVGGYAQNGYAHEVIELLSNMKSCGFHPDEFTYT 290
Query: 43 SILSACA 23
SILSACA
Sbjct: 291 SILSACA 297
>ref|XP_003540559.1| PREDICTED: pentatricopeptide repeat-containing protein At3g09040,
mitochondrial-like [Glycine max]
Length = 916
Score = 99.8 bits (247), Expect = 2e-19
Identities = 50/70 (71%), Positives = 56/70 (80%)
Frame = -2
Query: 223 AKCGSLDDANQQFELLTTRDHISWNAIIVGYVQEAEEDEAFSLFQRMMLDGIAPDEVSLA 44
AK G+L +A + FE +T RDHISWNAIIVGYVQE E AFSLF+RM+LDGI PDEVSLA
Sbjct: 364 AKAGALKEAGKHFEHMTYRDHISWNAIIVGYVQEEVEAGAFSLFRRMILDGIVPDEVSLA 423
Query: 43 SILSACAGTK 14
SILSAC K
Sbjct: 424 SILSACGNIK 433
>ref|XP_002307479.1| predicted protein [Populus trichocarpa] gi|222856928|gb|EEE94475.1|
predicted protein [Populus trichocarpa]
Length = 1026
Score = 99.8 bits (247), Expect = 2e-19
Identities = 49/74 (66%), Positives = 58/74 (78%)
Frame = -2
Query: 223 AKCGSLDDANQQFELLTTRDHISWNAIIVGYVQEAEEDEAFSLFQRMMLDGIAPDEVSLA 44
AK G+L+DA QQFEL+ RD++SWN IIVGYVQE +E EAF LF+RM L GI PDEVSLA
Sbjct: 474 AKSGALEDARQQFELIRNRDNVSWNVIIVGYVQEEDEVEAFHLFRRMNLLGILPDEVSLA 533
Query: 43 SILSACAGTKAFAE 2
SILSACA + +
Sbjct: 534 SILSACASVRGLEQ 547
Score = 60.1 bits (144), Expect = 2e-07
Identities = 29/70 (41%), Positives = 42/70 (60%)
Frame = -2
Query: 223 AKCGSLDDANQQFELLTTRDHISWNAIIVGYVQEAEEDEAFSLFQRMMLDGIAPDEVSLA 44
AKCG ++ A + F+ L ++ + WNA++ GYVQ +E LF M G PD+ + +
Sbjct: 373 AKCGKMEAAKKVFDTLNEQNVVLWNAMLGGYVQNGYANEVMELFFNMKSCGFYPDDFTYS 432
Query: 43 SILSACAGTK 14
SILSACA K
Sbjct: 433 SILSACACLK 442
>gb|ADN34182.1| pentatricopeptide repeat-containing protein [Cucumis melo subsp.
melo]
Length = 1131
Score = 94.4 bits (233), Expect = 9e-18
Identities = 44/74 (59%), Positives = 57/74 (77%)
Frame = -2
Query: 223 AKCGSLDDANQQFELLTTRDHISWNAIIVGYVQEAEEDEAFSLFQRMMLDGIAPDEVSLA 44
AK G+L +A +QFE + D++SWNAIIVGYVQE DEAF +F+RM+ +G+ PDEVSLA
Sbjct: 456 AKSGALKEARKQFEFMKIHDNVSWNAIIVGYVQEEYNDEAFFMFRRMVSNGVLPDEVSLA 515
Query: 43 SILSACAGTKAFAE 2
SI+SACA K F +
Sbjct: 516 SIVSACANVKEFKQ 529
Score = 54.7 bits (130), Expect = 8e-06
Identities = 27/67 (40%), Positives = 34/67 (50%)
Frame = -2
Query: 223 AKCGSLDDANQQFELLTTRDHISWNAIIVGYVQEAEEDEAFSLFQRMMLDGIAPDEVSLA 44
AKC +D A Q F L R+ + WNA++ G+ Q E F M G PDE +
Sbjct: 355 AKCSKMDAAKQVFNSLGERNIVLWNAMLGGFAQNGLAQEVMEFFSYMKRHGPQPDEFTFT 414
Query: 43 SILSACA 23
SI SACA
Sbjct: 415 SIFSACA 421
Score = 54.7 bits (130), Expect = 8e-06
Identities = 27/68 (39%), Positives = 41/68 (60%), Gaps = 1/68 (1%)
Frame = -2
Query: 223 AKCGSLDDANQQFELLTTRDH-ISWNAIIVGYVQEAEEDEAFSLFQRMMLDGIAPDEVSL 47
AKCG + + Q F + R+ ISWN++IVG + +EA +F++M I PDEV+
Sbjct: 760 AKCGDVKGSLQVFHEMPRRNSVISWNSMIVGLAKNGYAEEALEIFKQMEQQSIIPDEVTF 819
Query: 46 ASILSACA 23
+LSAC+
Sbjct: 820 LGVLSACS 827