BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00046362
         (288 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|BAM28750.1| reverse transcriptase-like protein, partial [Cam...   101   6e-20
dbj|BAM28751.1| reverse transcriptase-like protein, partial [Cam...    99   3e-19
gb|AFP55557.1| non-ltr retroelement reverse transcriptase [Rosa ...    94   2e-17
gb|AAF18538.1|AC006551_24 Very similar to retrotransposon revers...    94   2e-17
ref|XP_003635424.1| PREDICTED: LOW QUALITY PROTEIN: putative rib...    93   3e-17

>dbj|BAM28750.1| reverse transcriptase-like protein, partial [Camellia sinensis var.
           sinensis]
          Length = 255

 Score =  101 bits (252), Expect = 6e-20
 Identities = 43/93 (46%), Positives = 66/93 (70%)
 Frame = -3

Query: 280 KTIYWAAWQKLCNTKANGGLGFKDLRLYNLALLSKQV*RIITNPQCQLARIYKEKYFPQG 101
           + I+W +W++LC +K  GG+GF+ L+ +N ALL+KQ  R++  PQ  +AR++K +YFPQ 
Sbjct: 83  RKIHWTSWKQLCKSKLQGGMGFRCLQXFNSALLAKQCWRLVQRPQSLVARVFKARYFPQT 142

Query: 100 SF*NAQLGPNPSFTWRSLLQVRYFLNKTVNWDI 2
           SF +A +G NPSFTWRS++  R  LN  + W +
Sbjct: 143 SFLDALVGSNPSFTWRSIVGSRSLLNAGLRWRV 175


>dbj|BAM28751.1| reverse transcriptase-like protein, partial [Camellia sinensis var.
           sinensis]
          Length = 255

 Score = 99.4 bits (246), Expect = 3e-19
 Identities = 43/93 (46%), Positives = 65/93 (69%)
 Frame = -3

Query: 280 KTIYWAAWQKLCNTKANGGLGFKDLRLYNLALLSKQV*RIITNPQCQLARIYKEKYFPQG 101
           + I+W +W++LC +K  GG+GF+ L+ +N ALL+KQ  R+   PQ  +AR++K +YFPQ 
Sbjct: 83  RKIHWTSWKQLCKSKLRGGMGFRCLQHFNSALLAKQCWRLXQRPQSLVARVFKARYFPQT 142

Query: 100 SF*NAQLGPNPSFTWRSLLQVRYFLNKTVNWDI 2
           SF +A +G NPSFTWRS++  R  LN  + W +
Sbjct: 143 SFLDALVGSNPSFTWRSIVGSRRLLNAGLRWRV 175


>gb|AFP55557.1| non-ltr retroelement reverse transcriptase [Rosa rugosa]
          Length = 1747

 Score = 93.6 bits (231), Expect = 2e-17
 Identities = 46/93 (49%), Positives = 58/93 (62%)
 Frame = -3

Query: 280  KTIYWAAWQKLCNTKANGGLGFKDLRLYNLALLSKQV*RIITNPQCQLARIYKEKYFPQG 101
            K I+W  W  LC +K +GGLGF+DL L+N ALL KQ  R++  P   +AR+ K KYFP  
Sbjct: 1121 KGIHWRRWSDLCFSKKDGGLGFRDLSLFNQALLGKQGWRLMMYPDSLVARMLKAKYFPWD 1180

Query: 100  SF*NAQLGPNPSFTWRSLLQVRYFLNKTVNWDI 2
             F  A+LG +PS+ WRS L  R  L K V W I
Sbjct: 1181 DFMEAELGSSPSYLWRSFLWGRELLRKGVRWRI 1213


>gb|AAF18538.1|AC006551_24 Very similar to retrotransposon reverse transcriptase [Arabidopsis
           thaliana]
          Length = 1231

 Score = 93.6 bits (231), Expect = 2e-17
 Identities = 41/86 (47%), Positives = 59/86 (68%)
 Frame = -3

Query: 283 KKTIYWAAWQKLCNTKANGGLGFKDLRLYNLALLSKQV*RIITNPQCQLARIYKEKYFPQ 104
           ++ I+W +W+KLC  K +GGLGF+D+ L+N ALL+KQ  R++  P C  AR+ K +YFP 
Sbjct: 681 QRKIHWLSWEKLCLPKEHGGLGFRDIGLFNQALLAKQAWRLLQFPDCLFARLIKSRYFPV 740

Query: 103 GSF*NAQLGPNPSFTWRSLLQVRYFL 26
           G F ++ +G  PSF WRS+L  R  L
Sbjct: 741 GEFLDSDVGSRPSFGWRSILHGRDLL 766


>ref|XP_003635424.1| PREDICTED: LOW QUALITY PROTEIN: putative ribonuclease H protein
           At1g65750-like [Vitis vinifera]
          Length = 820

 Score = 92.8 bits (229), Expect = 3e-17
 Identities = 42/93 (45%), Positives = 60/93 (64%)
 Frame = -3

Query: 280 KTIYWAAWQKLCNTKANGGLGFKDLRLYNLALLSKQV*RIITNPQCQLARIYKEKYFPQG 101
           ++I W +W K+C  K +GGLGF+ L  +NLALL+KQ  R + NP   + RI++ +YF   
Sbjct: 302 RSIRWMSWGKMCKQKKDGGLGFRKLXDFNLALLAKQGWRFLRNPDSLVTRIFQARYFRNS 361

Query: 100 SF*NAQLGPNPSFTWRSLLQVRYFLNKTVNWDI 2
           SF NA+LG NPS+ WRS+L  +  L +   W I
Sbjct: 362 SFLNAELGSNPSYMWRSILAAQGLLKRGCYWSI 394