BLASTX nr result

ID: Lithospermum22_contig00046343 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00046343
         (269 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI22162.3| unnamed protein product [Vitis vinifera]              120   2e-25
emb|CAN79923.1| hypothetical protein VITISV_042443 [Vitis vinifera]   120   2e-25
ref|XP_002324039.1| f-box family protein [Populus trichocarpa] g...   119   3e-25
ref|XP_002277161.2| PREDICTED: ribosome assembly protein C18.05c...   114   6e-24
ref|XP_003543846.1| PREDICTED: pleiotropic regulator 1-like [Gly...    89   3e-16

>emb|CBI22162.3| unnamed protein product [Vitis vinifera]
          Length = 491

 Score =  120 bits (300), Expect = 2e-25
 Identities = 56/86 (65%), Positives = 68/86 (79%)
 Frame = +2

Query: 11  IIFSQGSKLNMISTENYLNGNVSLLTLGDHNARITCMRLFSLSETSLSRHATQRSNSLLL 190
           IIFSQGS + ++   +  +G   ++TL DHNARITCMRLF LSETSL R  TQR  ++L+
Sbjct: 111 IIFSQGSVIQIMKMGSIFSGRDFVVTLNDHNARITCMRLFPLSETSLFRSETQREENVLV 170

Query: 191 TSSCDHSIRLWFQGSCIRCFRGHNGP 268
           TSSCDHSIRLW++GSC RCFRGHNGP
Sbjct: 171 TSSCDHSIRLWWKGSCQRCFRGHNGP 196


>emb|CAN79923.1| hypothetical protein VITISV_042443 [Vitis vinifera]
          Length = 491

 Score =  120 bits (300), Expect = 2e-25
 Identities = 56/86 (65%), Positives = 68/86 (79%)
 Frame = +2

Query: 11  IIFSQGSKLNMISTENYLNGNVSLLTLGDHNARITCMRLFSLSETSLSRHATQRSNSLLL 190
           IIFSQGS + ++   +  +G   ++TL DHNARITCMRLF LSETSL R  TQR  ++L+
Sbjct: 111 IIFSQGSVIQIMKMGSIFSGRDFVVTLNDHNARITCMRLFPLSETSLFRSETQREENVLV 170

Query: 191 TSSCDHSIRLWFQGSCIRCFRGHNGP 268
           TSSCDHSIRLW++GSC RCFRGHNGP
Sbjct: 171 TSSCDHSIRLWWKGSCQRCFRGHNGP 196


>ref|XP_002324039.1| f-box family protein [Populus trichocarpa]
           gi|222867041|gb|EEF04172.1| f-box family protein
           [Populus trichocarpa]
          Length = 498

 Score =  119 bits (297), Expect = 3e-25
 Identities = 58/93 (62%), Positives = 70/93 (75%), Gaps = 4/93 (4%)
 Frame = +2

Query: 2   KDAIIFSQGSK----LNMISTENYLNGNVSLLTLGDHNARITCMRLFSLSETSLSRHATQ 169
           K+ I FSQGS     + M + +++LNG   +  L DHNARITCMRLF LSETSL R  TQ
Sbjct: 111 KNDISFSQGSYPGSLVQMTNIDSFLNGRDGVTALSDHNARITCMRLFPLSETSLFRSETQ 170

Query: 170 RSNSLLLTSSCDHSIRLWFQGSCIRCFRGHNGP 268
           R  ++L+TSSCDHSIRLW++GSC RCFRGHNGP
Sbjct: 171 RKENVLVTSSCDHSIRLWWKGSCQRCFRGHNGP 203


>ref|XP_002277161.2| PREDICTED: ribosome assembly protein C18.05c [Vitis vinifera]
          Length = 494

 Score =  114 bits (286), Expect = 6e-24
 Identities = 56/89 (62%), Positives = 68/89 (76%), Gaps = 3/89 (3%)
 Frame = +2

Query: 11  IIFSQ---GSKLNMISTENYLNGNVSLLTLGDHNARITCMRLFSLSETSLSRHATQRSNS 181
           IIFSQ   GS + ++   +  +G   ++TL DHNARITCMRLF LSETSL R  TQR  +
Sbjct: 111 IIFSQVYRGSVIQIMKMGSIFSGRDFVVTLNDHNARITCMRLFPLSETSLFRSETQREEN 170

Query: 182 LLLTSSCDHSIRLWFQGSCIRCFRGHNGP 268
           +L+TSSCDHSIRLW++GSC RCFRGHNGP
Sbjct: 171 VLVTSSCDHSIRLWWKGSCQRCFRGHNGP 199


>ref|XP_003543846.1| PREDICTED: pleiotropic regulator 1-like [Glycine max]
          Length = 501

 Score = 89.4 bits (220), Expect = 3e-16
 Identities = 48/93 (51%), Positives = 65/93 (69%), Gaps = 4/93 (4%)
 Frame = +2

Query: 2   KDAIIFSQ-GSKLNMISTENYLNGNVS--LLTLGDHNARITCMRLFSLSE-TSLSRHATQ 169
           K+ + +SQ GS++ +I  +  L    +    +L  H ARITCMRLF L+E TS+ R  TQ
Sbjct: 118 KNHLFYSQQGSRVEVIDLDGCLKRTTTDFFHSLCYHKARITCMRLFPLNEMTSVFRGDTQ 177

Query: 170 RSNSLLLTSSCDHSIRLWFQGSCIRCFRGHNGP 268
              ++L+TSSCDHSIRLW++GS +RCFRGHNGP
Sbjct: 178 GEQNVLVTSSCDHSIRLWWKGSSLRCFRGHNGP 210


Top