BLASTX nr result

ID: Lithospermum22_contig00046322 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00046322
         (273 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAH68023.1| OSIGBa0136O08-OSIGBa0153H12.1 [Oryza sativa Indi...    61   8e-08
emb|CAD39568.2| OSJNBa0019G23.12 [Oryza sativa Japonica Group]         61   8e-08
gb|AAY23271.1| retrotransposon protein, putative, unclassified [...    56   3e-06
gb|EEE51773.1| hypothetical protein OsJ_33218 [Oryza sativa Japo...    56   3e-06
gb|ABA96523.1| retrotransposon protein, putative, unclassified, ...    55   6e-06

>emb|CAH68023.1| OSIGBa0136O08-OSIGBa0153H12.1 [Oryza sativa Indica Group]
          Length = 1171

 Score = 61.2 bits (147), Expect = 8e-08
 Identities = 29/66 (43%), Positives = 41/66 (62%)
 Frame = -2

Query: 236  GFKASNMPFKYL*IAIHRVKKRNFMFDELIAKTRKQISDWSSCCSSYGGKLVLLQSVLSS 57
            G +  N PF+YL I IH  K RN  + E++ +  K++S W     S GG+L L+ SVLSS
Sbjct: 861  GCQVGNFPFRYLGIPIHCRKLRNAEWKEVVERFEKKLSSWKGKLLSLGGRLTLINSVLSS 920

Query: 56   FPLYLM 39
             P+Y+M
Sbjct: 921  LPMYMM 926


>emb|CAD39568.2| OSJNBa0019G23.12 [Oryza sativa Japonica Group]
          Length = 1140

 Score = 61.2 bits (147), Expect = 8e-08
 Identities = 29/66 (43%), Positives = 41/66 (62%)
 Frame = -2

Query: 236  GFKASNMPFKYL*IAIHRVKKRNFMFDELIAKTRKQISDWSSCCSSYGGKLVLLQSVLSS 57
            G +  N PF+YL I IH  K RN  + E++ +  K++S W     S GG+L L+ SVLSS
Sbjct: 972  GCQVGNFPFRYLGIPIHCRKLRNAEWKEVVERFEKKLSSWKGKLLSLGGRLTLINSVLSS 1031

Query: 56   FPLYLM 39
             P+Y+M
Sbjct: 1032 LPMYMM 1037


>gb|AAY23271.1| retrotransposon protein, putative, unclassified [Oryza sativa
           Japonica Group] gi|77548971|gb|ABA91768.1|
           retrotransposon protein, putative, unclassified [Oryza
           sativa Japonica Group]
          Length = 885

 Score = 55.8 bits (133), Expect = 3e-06
 Identities = 28/66 (42%), Positives = 38/66 (57%)
 Frame = -2

Query: 236 GFKASNMPFKYL*IAIHRVKKRNFMFDELIAKTRKQISDWSSCCSSYGGKLVLLQSVLSS 57
           G      PF+YL I IH  + RN  + E++    K++S W     S GG+L L+ SVLSS
Sbjct: 737 GCSTGQFPFRYLGIPIHYRRLRNADWKEVVECFEKRLSSWKGKLLSTGGRLTLINSVLSS 796

Query: 56  FPLYLM 39
            PLY+M
Sbjct: 797 LPLYMM 802


>gb|EEE51773.1| hypothetical protein OsJ_33218 [Oryza sativa Japonica Group]
          Length = 378

 Score = 55.8 bits (133), Expect = 3e-06
 Identities = 28/66 (42%), Positives = 38/66 (57%)
 Frame = -2

Query: 236 GFKASNMPFKYL*IAIHRVKKRNFMFDELIAKTRKQISDWSSCCSSYGGKLVLLQSVLSS 57
           G      PF+YL I IH  + RN  + E++    K++S W     S GG+L L+ SVLSS
Sbjct: 5   GCSTGQFPFRYLGIPIHYRRLRNADWKEVVECFEKRLSSWKGKLLSTGGRLTLINSVLSS 64

Query: 56  FPLYLM 39
            PLY+M
Sbjct: 65  LPLYMM 70


>gb|ABA96523.1| retrotransposon protein, putative, unclassified, expressed [Oryza
            sativa Japonica Group]
          Length = 1244

 Score = 55.1 bits (131), Expect = 6e-06
 Identities = 27/66 (40%), Positives = 43/66 (65%)
 Frame = -2

Query: 236  GFKASNMPFKYL*IAIHRVKKRNFMFDELIAKTRKQISDWSSCCSSYGGKLVLLQSVLSS 57
            G  + + PF+YL I IH  K RN  +  +  + ++++S W    +SYGG+LVLL SVLSS
Sbjct: 1037 GCNSGSFPFRYLGIPIHYRKLRNSDWKCVEDRFQRKLSTWKGKNNSYGGRLVLLNSVLSS 1096

Query: 56   FPLYLM 39
             P++++
Sbjct: 1097 LPMFML 1102


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