BLASTX nr result

ID: Lithospermum22_contig00046314 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00046314
         (249 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003528453.1| PREDICTED: pentatricopeptide repeat-containi...   128   4e-28
ref|XP_003541534.1| PREDICTED: pentatricopeptide repeat-containi...   126   2e-27
ref|XP_004155648.1| PREDICTED: pentatricopeptide repeat-containi...   125   4e-27
ref|XP_004134955.1| PREDICTED: pentatricopeptide repeat-containi...   125   4e-27
ref|XP_003635166.1| PREDICTED: LOW QUALITY PROTEIN: pentatricope...   124   1e-26

>ref|XP_003528453.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g33760-like [Glycine max]
          Length = 582

 Score =  128 bits (322), Expect = 4e-28
 Identities = 60/79 (75%), Positives = 71/79 (89%), Gaps = 1/79 (1%)
 Frame = -3

Query: 247 SAMHELEEEEKQYALRYHSEKLAVAYGLLKTSQG-TIRVVKNLNICEDCHMALKLISQVL 71
           SAMHELEEEE++YALRYHSEKLAVA+GL+KT  G T+R+VKNL ICEDCH A+K IS V+
Sbjct: 497 SAMHELEEEEREYALRYHSEKLAVAFGLMKTCHGVTLRIVKNLRICEDCHSAIKFISVVM 556

Query: 70  NKEIIVRDKFRFHHFRDGA 14
           N+EIIVRDK RFHHFR+G+
Sbjct: 557 NREIIVRDKLRFHHFREGS 575


>ref|XP_003541534.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g33760-like [Glycine max]
          Length = 582

 Score =  126 bits (317), Expect = 2e-27
 Identities = 59/79 (74%), Positives = 70/79 (88%), Gaps = 1/79 (1%)
 Frame = -3

Query: 247 SAMHELEEEEKQYALRYHSEKLAVAYGLLKTSQG-TIRVVKNLNICEDCHMALKLISQVL 71
           SAMHELE EE++YALRYHSEKLAVA+GL+KT  G T+R+VKNL ICEDCH A+K IS V+
Sbjct: 497 SAMHELEGEEREYALRYHSEKLAVAFGLMKTGDGVTLRIVKNLRICEDCHSAIKFISAVM 556

Query: 70  NKEIIVRDKFRFHHFRDGA 14
           N+EIIVRDK RFHHFR+G+
Sbjct: 557 NREIIVRDKLRFHHFREGS 575


>ref|XP_004155648.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g33760-like [Cucumis sativus]
          Length = 663

 Score =  125 bits (314), Expect = 4e-27
 Identities = 59/79 (74%), Positives = 71/79 (89%), Gaps = 1/79 (1%)
 Frame = -3

Query: 247 SAMHELEEEEKQYALRYHSEKLAVAYGLLKTSQG-TIRVVKNLNICEDCHMALKLISQVL 71
           S MH+LEEEE+ YALRYHSEKLA+A+GLLKT+QG TIR+VKNL ICEDCH A+K IS + 
Sbjct: 578 SLMHDLEEEERDYALRYHSEKLALAFGLLKTNQGETIRIVKNLRICEDCHSAIKHISIIA 637

Query: 70  NKEIIVRDKFRFHHFRDGA 14
           ++EIIVRDKFRFHHF+DG+
Sbjct: 638 DREIIVRDKFRFHHFKDGS 656


>ref|XP_004134955.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g33760-like [Cucumis sativus]
          Length = 599

 Score =  125 bits (314), Expect = 4e-27
 Identities = 59/79 (74%), Positives = 71/79 (89%), Gaps = 1/79 (1%)
 Frame = -3

Query: 247 SAMHELEEEEKQYALRYHSEKLAVAYGLLKTSQG-TIRVVKNLNICEDCHMALKLISQVL 71
           S MH+LEEEE+ YALRYHSEKLA+A+GLLKT+QG TIR+VKNL ICEDCH A+K IS + 
Sbjct: 514 SLMHDLEEEERDYALRYHSEKLALAFGLLKTNQGETIRIVKNLRICEDCHSAIKHISIIA 573

Query: 70  NKEIIVRDKFRFHHFRDGA 14
           ++EIIVRDKFRFHHF+DG+
Sbjct: 574 DREIIVRDKFRFHHFKDGS 592


>ref|XP_003635166.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At2g33760-like [Vitis vinifera]
          Length = 561

 Score =  124 bits (310), Expect = 1e-26
 Identities = 56/76 (73%), Positives = 68/76 (89%), Gaps = 1/76 (1%)
 Frame = -3

Query: 241 MHELEEEEKQYALRYHSEKLAVAYGLLKTSQG-TIRVVKNLNICEDCHMALKLISQVLNK 65
           MHELEEEE++YALRYHSEKLA+A+GL+KTS G TIR+VKNL +CEDCH A+K IS + N+
Sbjct: 478 MHELEEEEREYALRYHSEKLAIAFGLMKTSHGMTIRIVKNLRMCEDCHSAIKFISNIANR 537

Query: 64  EIIVRDKFRFHHFRDG 17
           EIIVRDK RFHHF++G
Sbjct: 538 EIIVRDKLRFHHFKNG 553


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