BLASTX nr result

ID: Lithospermum22_contig00046256 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00046256
         (404 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004152964.1| PREDICTED: LOW QUALITY PROTEIN: condensin-2 ...   107   1e-21
ref|XP_002275652.1| PREDICTED: condensin-2 complex subunit D3-li...   103   1e-20
emb|CBI26044.3| unnamed protein product [Vitis vinifera]              100   9e-20
ref|XP_002315519.1| predicted protein [Populus trichocarpa] gi|2...    98   8e-19
ref|XP_003533347.1| PREDICTED: condensin-2 complex subunit D3-li...    92   3e-17

>ref|XP_004152964.1| PREDICTED: LOW QUALITY PROTEIN: condensin-2 complex subunit D3-like,
            partial [Cucumis sativus]
          Length = 929

 Score =  107 bits (266), Expect = 1e-21
 Identities = 63/139 (45%), Positives = 83/139 (59%), Gaps = 5/139 (3%)
 Frame = -2

Query: 403  KNEIDDMLIADKQLQKELIYDMQRFETMKAKSTAAEAVATMRSPVD----QKIPSSVLLK 236
            KNEIDD+L+ADKQLQKE +YD+QR+E+ KAKS  AEAV  M+   +    +  P +V + 
Sbjct: 787  KNEIDDLLVADKQLQKESLYDIQRYESTKAKSAVAEAVNEMQKSTNYLSPEAPPQAVSVL 846

Query: 235  STITGKLQHTKGXXXXXXXXXXXXXXXXVLRDVNKG-KTPPLGEMSVPKLKSRSGDATNK 59
            + +T KLQ+                   VLR+VN+G  TPPLG  S+PKLKSR G     
Sbjct: 847  NNLTSKLQNDSKVASAIADAAAAATAKSVLREVNRGTSTPPLGSRSLPKLKSRIGGNNGT 906

Query: 58   GERAAHVIESLRRRQFFDS 2
                 +VIESLR+ Q F+S
Sbjct: 907  NTSGLNVIESLRKHQSFES 925


>ref|XP_002275652.1| PREDICTED: condensin-2 complex subunit D3-like [Vitis vinifera]
          Length = 1345

 Score =  103 bits (258), Expect = 1e-20
 Identities = 66/140 (47%), Positives = 84/140 (60%), Gaps = 6/140 (4%)
 Frame = -2

Query: 403  KNEIDDMLIADKQLQKELIYDMQRFETMKAKSTAAEAVATM----RSPVDQKIPSSVLLK 236
            KNEIDDML+ADKQLQKELIYDM++++  KAKSTAA AVATM    RSP   K    + ++
Sbjct: 1211 KNEIDDMLVADKQLQKELIYDMEKYDAAKAKSTAAAAVATMQPCYRSPHVSKFTERLPVQ 1270

Query: 235  STITGKLQHTKGXXXXXXXXXXXXXXXXVLRDVNKGK-TPPLGEMSVPKLKSRSGDAT-N 62
            S +   +                     VL++VN+G  TPP   +  PKLKS  G  T +
Sbjct: 1271 SRVASAMSDA----------VAAATVRSVLKEVNRGSPTPPFSSIGRPKLKSSMGGTTSS 1320

Query: 61   KGERAAHVIESLRRRQFFDS 2
            +G+R   VIESLRRRQ F+S
Sbjct: 1321 RGDRPLDVIESLRRRQSFNS 1340


>emb|CBI26044.3| unnamed protein product [Vitis vinifera]
          Length = 1294

 Score =  100 bits (250), Expect = 9e-20
 Identities = 67/143 (46%), Positives = 86/143 (60%), Gaps = 9/143 (6%)
 Frame = -2

Query: 403  KNEIDDMLIADKQLQKELIYDMQRFETMKAKSTAAEAVATM----RSPVDQKIPSSV--- 245
            KNEIDDML+ADKQLQKELIYDM++++  KAKSTAA AVATM    RSP   K+ S++   
Sbjct: 1170 KNEIDDMLVADKQLQKELIYDMEKYDAAKAKSTAAAAVATMQPCYRSPHVSKVASAMSDA 1229

Query: 244  LLKSTITGKLQHTKGXXXXXXXXXXXXXXXXVLRDVNKGK-TPPLGEMSVPKLKSRSGDA 68
            +  +T+                         VL++VN+G  TPP   +  PKLKS  G  
Sbjct: 1230 VAAATVRS-----------------------VLKEVNRGSPTPPFSSIGRPKLKSSMGGT 1266

Query: 67   T-NKGERAAHVIESLRRRQFFDS 2
            T ++G+R   VIESLRRRQ F+S
Sbjct: 1267 TSSRGDRPLDVIESLRRRQSFNS 1289


>ref|XP_002315519.1| predicted protein [Populus trichocarpa] gi|222864559|gb|EEF01690.1|
            predicted protein [Populus trichocarpa]
          Length = 1272

 Score = 97.8 bits (242), Expect = 8e-19
 Identities = 62/141 (43%), Positives = 77/141 (54%), Gaps = 7/141 (4%)
 Frame = -2

Query: 403  KNEIDDMLIADKQLQKELIYDMQRFETMKAKSTAAEAVATMR------SPVDQKIPSSVL 242
            KNEID++L+ADKQLQKELIYDMQ++ET KAKS AA  VA+M+      SP   K      
Sbjct: 1128 KNEIDEILVADKQLQKELIYDMQKYETSKAKSAAAVVVASMQNHSSFLSPGASKTAGGTK 1187

Query: 241  LKSTITGKLQHTKGXXXXXXXXXXXXXXXXVLRDVNKG-KTPPLGEMSVPKLKSRSGDAT 65
             +  +    Q                    VLR+VN+G  TPPL  +S PKLK       
Sbjct: 1188 AQDNLNENPQSDSRVASAMANAVAEARVRSVLREVNRGIATPPLSSISRPKLKPNQDGTG 1247

Query: 64   NKGERAAHVIESLRRRQFFDS 2
             + +R  HV+ESLRRRQ F S
Sbjct: 1248 ARTDRPPHVLESLRRRQSFYS 1268


>ref|XP_003533347.1| PREDICTED: condensin-2 complex subunit D3-like [Glycine max]
          Length = 1334

 Score = 92.4 bits (228), Expect = 3e-17
 Identities = 62/143 (43%), Positives = 83/143 (58%), Gaps = 9/143 (6%)
 Frame = -2

Query: 403  KNEIDDMLIADKQLQKELIYDMQRFETMKAKSTAAEAVATMRSPVDQKIP--SSVLLKST 230
            KNEIDD+L+ADKQLQKELIYD++++E  KAK+T AEAV T    V  + P  S  L K+ 
Sbjct: 1189 KNEIDDILVADKQLQKELIYDIKKYEAAKAKATVAEAVGTKPKSVSNQSPDASKNLTKTQ 1248

Query: 229  ------ITGKLQHTKGXXXXXXXXXXXXXXXXVLRDVNKGK-TPPLGEMSVPKLKSRSGD 71
                   + +L                     VLR++NKG  TP L  +SVPK+KS +G 
Sbjct: 1249 GQTVGQSSNELPSDSRVASAMANAAAAATARSVLREINKGTATPSLSSLSVPKVKSCTGM 1308

Query: 70   ATNKGERAAHVIESLRRRQFFDS 2
              +K +R   VI+S+R+RQ FDS
Sbjct: 1309 CHSKDKRM-DVIQSIRKRQSFDS 1330


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