BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00046253
         (292 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN77602.1| hypothetical protein VITISV_024474 [Vitis vinifera]    66   4e-20
sp|P10978.1|POLX_TOBAC RecName: Full=Retrovirus-related Pol poly...    75   7e-20
emb|CAN65406.1| hypothetical protein VITISV_030853 [Vitis vinifera]    65   2e-19
emb|CAN66323.1| hypothetical protein VITISV_007384 [Vitis vinifera]    64   4e-19
gb|AER13172.1| putative gag/pol polyprotein [Phaseolus vulgaris]       63   2e-18

>emb|CAN77602.1| hypothetical protein VITISV_024474 [Vitis vinifera]
          Length = 1207

 Score = 65.9 bits (159), Expect(2) = 4e-20
 Identities = 33/51 (64%), Positives = 38/51 (74%), Gaps = 1/51 (1%)
 Frame = +2

Query: 143 GKQHRVSFNK-SIQRKTKILELVYSDVCGPMKVKTIGGCSYFVIFIDDYSR 292
           GKQ RV+F      RK  +L+LVYSDVCGPMK KT+GG  YFV FIDD+SR
Sbjct: 343 GKQTRVAFKTLRYTRKPGMLDLVYSDVCGPMKTKTLGGSLYFVTFIDDHSR 393



 Score = 57.0 bits (136), Expect(2) = 4e-20
 Identities = 24/45 (53%), Positives = 31/45 (68%)
 Frame = +3

Query: 12  EPTMKLWQNRLGHMSEKGLNILSRKNVLPKFTDAHVENCTHCLMG 146
           + T +LW NRLGHMSEKGL IL++KN+L       ++ C HCL G
Sbjct: 299 DSTFELWHNRLGHMSEKGLMILAKKNLLSGMKKGSLKRCAHCLAG 343


>sp|P10978.1|POLX_TOBAC RecName: Full=Retrovirus-related Pol polyprotein from transposon
           TNT 1-94; Includes: RecName: Full=Protease; Includes:
           RecName: Full=Reverse transcriptase; Includes: RecName:
           Full=Endonuclease gi|20045|emb|CAA32025.1| unnamed
           protein product [Nicotiana tabacum]
          Length = 1328

 Score = 74.7 bits (182), Expect(2) = 7e-20
 Identities = 34/50 (68%), Positives = 41/50 (82%)
 Frame = +2

Query: 143 GKQHRVSFNKSIQRKTKILELVYSDVCGPMKVKTIGGCSYFVIFIDDYSR 292
           GKQHRVSF  S +RK  IL+LVYSDVCGPM+++++GG  YFV FIDD SR
Sbjct: 463 GKQHRVSFQTSSERKLNILDLVYSDVCGPMEIESMGGNKYFVTFIDDASR 512



 Score = 47.4 bits (111), Expect(2) = 7e-20
 Identities = 20/45 (44%), Positives = 30/45 (66%)
 Frame = +3

Query: 12  EPTMKLWQNRLGHMSEKGLNILSRKNVLPKFTDAHVENCTHCLMG 146
           E ++ LW  R+GHMSEKGL IL++K+++       V+ C +CL G
Sbjct: 419 EISVDLWHKRMGHMSEKGLQILAKKSLISYAKGTTVKPCDYCLFG 463


>emb|CAN65406.1| hypothetical protein VITISV_030853 [Vitis vinifera]
          Length = 1017

 Score = 65.5 bits (158), Expect(2) = 2e-19
 Identities = 34/52 (65%), Positives = 41/52 (78%), Gaps = 2/52 (3%)
 Frame = +2

Query: 143 GKQHRVSFNKSIQ--RKTKILELVYSDVCGPMKVKTIGGCSYFVIFIDDYSR 292
           GKQ RV+F K++   RK  +L+LVYSDVCGPMK KT+GG  YFV FIDD+SR
Sbjct: 214 GKQTRVAF-KTLHHTRKPGMLDLVYSDVCGPMKTKTLGGSLYFVTFIDDHSR 264



 Score = 54.7 bits (130), Expect(2) = 2e-19
 Identities = 23/45 (51%), Positives = 30/45 (66%)
 Frame = +3

Query: 12  EPTMKLWQNRLGHMSEKGLNILSRKNVLPKFTDAHVENCTHCLMG 146
           + T KLW NRL HMSEKGL I+++KN+L       ++ C HCL G
Sbjct: 170 DSTFKLWHNRLSHMSEKGLMIMAKKNLLSGMKKGSLKRCAHCLGG 214


>emb|CAN66323.1| hypothetical protein VITISV_007384 [Vitis vinifera]
          Length = 1317

 Score = 64.3 bits (155), Expect(2) = 4e-19
 Identities = 33/52 (63%), Positives = 41/52 (78%), Gaps = 2/52 (3%)
 Frame = +2

Query: 143 GKQHRVSFNKSIQ--RKTKILELVYSDVCGPMKVKTIGGCSYFVIFIDDYSR 292
           GKQ RV+F K+++  RK  + +LVYSDVCGPMK KT+GG  YFV FIDD+SR
Sbjct: 411 GKQTRVAF-KTLRHTRKPGMFDLVYSDVCGPMKTKTLGGSLYFVTFIDDHSR 461



 Score = 55.1 bits (131), Expect(2) = 4e-19
 Identities = 23/45 (51%), Positives = 30/45 (66%)
 Frame = +3

Query: 12  EPTMKLWQNRLGHMSEKGLNILSRKNVLPKFTDAHVENCTHCLMG 146
           + T +LW NRLGHMSEKGL IL++ N+L       ++ C HCL G
Sbjct: 367 DSTFELWHNRLGHMSEKGLMILAKNNLLSGMKKGSLKRCAHCLAG 411


>gb|AER13172.1| putative gag/pol polyprotein [Phaseolus vulgaris]
          Length = 1556

 Score = 62.8 bits (151), Expect(2) = 2e-18
 Identities = 32/51 (62%), Positives = 39/51 (76%), Gaps = 1/51 (1%)
 Frame = +2

Query: 143 GKQHRVSFNKSI-QRKTKILELVYSDVCGPMKVKTIGGCSYFVIFIDDYSR 292
           GKQ RVSF K    +K+++LELV+SDVCGP+KVK+  G  YFV FIDD SR
Sbjct: 455 GKQTRVSFKKHPPSKKSELLELVHSDVCGPLKVKSFTGTIYFVTFIDDCSR 505



 Score = 54.3 bits (129), Expect(2) = 2e-18
 Identities = 22/48 (45%), Positives = 32/48 (66%)
 Frame = +3

Query: 3   NTIEPTMKLWQNRLGHMSEKGLNILSRKNVLPKFTDAHVENCTHCLMG 146
           N ++    LW  RL H+SEKGLN L++K+VL    +A +E C+HC+ G
Sbjct: 408 NAMDMDASLWHRRLSHISEKGLNCLAKKDVLSGLKNAELEKCSHCMAG 455