BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00046174
         (539 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002264078.2| PREDICTED: pentatricopeptide repeat-containi...   202   3e-50
ref|XP_002529628.1| pentatricopeptide repeat-containing protein,...   202   3e-50
ref|XP_004141609.1| PREDICTED: pentatricopeptide repeat-containi...   198   5e-49
ref|NP_174603.1| pentatricopeptide repeat-containing protein [Ar...   172   3e-41
ref|XP_002891041.1| pentatricopeptide repeat-containing protein ...   170   1e-40

>ref|XP_002264078.2| PREDICTED: pentatricopeptide repeat-containing protein
           At1g33350-like [Vitis vinifera]
          Length = 573

 Score =  202 bits (514), Expect = 3e-50
 Identities = 100/179 (55%), Positives = 129/179 (72%)
 Frame = +2

Query: 2   NNLSYACSIFNYITTPNTHIYTAMITAYTXXXXXXXXVLLYREMVRKCCSKPNQFTFPIV 181
           +NLSYA  IF+++ +PN ++YTAMITAY         +LLYR MVR+    PN F +P V
Sbjct: 102 SNLSYARFIFDHVESPNVYLYTAMITAYASHSDHTSALLLYRNMVRRRRPWPNHFIYPHV 161

Query: 182 LKSCPEIVKPFGIEMVHTQVEKCGFGQYPVVQTALLDAYSRFSSDIVIARRVFDEMHEKN 361
           LKSC ++V P    MVH QV + GF QYPVVQTALLDAY RF SD+  AR +FDEM E+N
Sbjct: 162 LKSCTQVVGPGSARMVHCQVLRSGFEQYPVVQTALLDAYLRFWSDVESARLLFDEMTERN 221

Query: 362 VVSWTAMITGCTRVGDVGNAIALFDRVPREARDTPCWNSIIAGCAQNGMYNDAISFFKR 538
           VVSWTAMI+G TR+G +GNA+ LF+ +P   RD P WN++IAG  QNG++ +A+S F+R
Sbjct: 222 VVSWTAMISGYTRLGQIGNAVLLFEEMPE--RDVPSWNALIAGYTQNGLFMEALSLFRR 278


>ref|XP_002529628.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223530913|gb|EEF32773.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 400

 Score =  202 bits (513), Expect = 3e-50
 Identities = 101/180 (56%), Positives = 131/180 (72%), Gaps = 1/180 (0%)
 Frame = +2

Query: 2   NNLSYACSIFNYITTPNTHIYTAMITAYTXXXXXXXXVL-LYREMVRKCCSKPNQFTFPI 178
           +N +YA  IFN++ +PN +++TA++TAY            LYR+MVR+   KPN F FP 
Sbjct: 56  SNFNYARYIFNHLHSPNIYLFTALVTAYASNPDHHLSAFELYRDMVRRAHPKPNHFIFPH 115

Query: 179 VLKSCPEIVKPFGIEMVHTQVEKCGFGQYPVVQTALLDAYSRFSSDIVIARRVFDEMHEK 358
           VLKSC         ++VH+Q+ K GF QYPVVQTAL+D+YSRF SDI  AR+VFDEM E+
Sbjct: 116 VLKSCQNT------KVVHSQIAKLGFSQYPVVQTALVDSYSRFMSDIGCARQVFDEMSER 169

Query: 359 NVVSWTAMITGCTRVGDVGNAIALFDRVPREARDTPCWNSIIAGCAQNGMYNDAISFFKR 538
           NVVSWTAMITG TRVG+VGNAI++FD++P   RD P WNSIIAGC QNG++ +AI  F++
Sbjct: 170 NVVSWTAMITGYTRVGEVGNAISIFDKMPE--RDVPSWNSIIAGCTQNGLFIEAICLFRK 227


>ref|XP_004141609.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g33350-like [Cucumis sativus]
           gi|449510706|ref|XP_004163739.1| PREDICTED:
           pentatricopeptide repeat-containing protein
           At1g33350-like [Cucumis sativus]
          Length = 563

 Score =  198 bits (503), Expect = 5e-49
 Identities = 99/178 (55%), Positives = 128/178 (71%)
 Frame = +2

Query: 5   NLSYACSIFNYITTPNTHIYTAMITAYTXXXXXXXXVLLYREMVRKCCSKPNQFTFPIVL 184
           +L YA  IF+ +T+PN  +YTAMITAY          LLYR MVR+   +PN F +P VL
Sbjct: 91  DLCYARYIFDNLTSPNVFLYTAMITAYASYPDPKAAFLLYRNMVRRGAIRPNNFIYPHVL 150

Query: 185 KSCPEIVKPFGIEMVHTQVEKCGFGQYPVVQTALLDAYSRFSSDIVIARRVFDEMHEKNV 364
           +SCP+++     +MVHTQV K GFG YPVVQTA++D+YSRFSSDI  AR++FDEM E+ V
Sbjct: 151 RSCPDVLGSNATKMVHTQVLKSGFGGYPVVQTAIVDSYSRFSSDIGSARQMFDEMLERTV 210

Query: 365 VSWTAMITGCTRVGDVGNAIALFDRVPREARDTPCWNSIIAGCAQNGMYNDAISFFKR 538
           VSWTAMI+G  R+G+  +AI LF+ +P   RD P WN++IAGCAQNG + +AI  FKR
Sbjct: 211 VSWTAMISGYARLGNFDSAIELFESMPE--RDVPAWNALIAGCAQNGFFCEAIWLFKR 266



 Score = 55.1 bits (131), Expect = 7e-06
 Identities = 47/193 (24%), Positives = 77/193 (39%), Gaps = 16/193 (8%)
 Frame = +2

Query: 5   NLSYACSIFNYITTPNTHIYTAMITAYTXXXXXXXXVLLYREMVRKCC--------SKPN 160
           N   A  +F  +   +   + A+I            + L++ MV            +KPN
Sbjct: 225 NFDSAIELFESMPERDVPAWNALIAGCAQNGFFCEAIWLFKRMVLLALEGNNNDRENKPN 284

Query: 161 QFTFPIVLKSCPEIVKPFGIEMVHTQVEKCGFGQYPVVQTALLDAYSRFSSDIVIARRVF 340
           + T    L +C         + +H  V K   GQ   +  ALLD Y +   ++ +ARRVF
Sbjct: 285 KTTLGSALSACGHTGMLHLGKWIHGYVFKTYPGQDSFISNALLDMYGK-CGNLKVARRVF 343

Query: 341 DEMHEKNVVSWTAMITGCTRVGDVGNAIALFDRV--------PREARDTPCWNSIIAGCA 496
           D +  KN+ SW ++I      G  G+AI LF  +        P E      +  ++  C 
Sbjct: 344 DMITLKNLTSWNSLINCLALHGHSGSAIDLFAELIHCGDGVKPNEV----TFVGVLNACT 399

Query: 497 QNGMYNDAISFFK 535
             G+     S+F+
Sbjct: 400 HGGLVEKGYSYFE 412


>ref|NP_174603.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
           gi|75168867|sp|Q9C501.1|PPR70_ARATH RecName:
           Full=Pentatricopeptide repeat-containing protein
           At1g33350 gi|12322383|gb|AAG51215.1|AC051630_12 unknown
           protein; 15445-13829 [Arabidopsis thaliana]
           gi|12322567|gb|AAG51281.1|AC027035_4 PPR-repeat protein,
           putative [Arabidopsis thaliana]
           gi|332193465|gb|AEE31586.1| pentatricopeptide
           repeat-containing protein [Arabidopsis thaliana]
          Length = 538

 Score =  172 bits (436), Expect = 3e-41
 Identities = 86/180 (47%), Positives = 119/180 (66%), Gaps = 2/180 (1%)
 Frame = +2

Query: 5   NLSYACSIFNYITTPNTHIYTAMITAYTXXXXXXXXVLL--YREMVRKCCSKPNQFTFPI 178
           NLSYA  IF+  + PNTH+Y A++TAY+             +R MV +   +PN F +P+
Sbjct: 72  NLSYARFIFDRFSFPNTHLYAAVLTAYSSSLPLHASSAFSFFRLMVNRSVPRPNHFIYPL 131

Query: 179 VLKSCPEIVKPFGIEMVHTQVEKCGFGQYPVVQTALLDAYSRFSSDIVIARRVFDEMHEK 358
           VLKS P +   F   +VHT + K GF  Y VVQTALL +Y+   S I +AR++FDEM E+
Sbjct: 132 VLKSTPYLSSAFSTPLVHTHLFKSGFHLYVVVQTALLHSYASSVSHITLARQLFDEMSER 191

Query: 359 NVVSWTAMITGCTRVGDVGNAIALFDRVPREARDTPCWNSIIAGCAQNGMYNDAISFFKR 538
           NVVSWTAM++G  R GD+ NA+ALF+ +P   RD P WN+I+A C QNG++ +A+S F+R
Sbjct: 192 NVVSWTAMLSGYARSGDISNAVALFEDMPE--RDVPSWNAILAACTQNGLFLEAVSLFRR 249


>ref|XP_002891041.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata] gi|297336883|gb|EFH67300.1|
           pentatricopeptide repeat-containing protein [Arabidopsis
           lyrata subsp. lyrata]
          Length = 586

 Score =  170 bits (430), Expect = 1e-40
 Identities = 85/180 (47%), Positives = 118/180 (65%), Gaps = 2/180 (1%)
 Frame = +2

Query: 5   NLSYACSIFNYITTPNTHIYTAMITAYTXXXXXXXXVLL--YREMVRKCCSKPNQFTFPI 178
           NLSYA  IF+  + PNTH+Y A++T Y+             +R MV +   +PN F +P+
Sbjct: 72  NLSYARFIFDRFSFPNTHLYAAVLTGYSSSLPLHASSAFSFFRLMVNRSFPRPNHFIYPL 131

Query: 179 VLKSCPEIVKPFGIEMVHTQVEKCGFGQYPVVQTALLDAYSRFSSDIVIARRVFDEMHEK 358
           VLKS P +   F   +VHT + K GF  Y VVQTALL +Y+   S I +AR++FDEM E+
Sbjct: 132 VLKSTPYLSSAFSTPLVHTHLFKSGFHLYVVVQTALLHSYASSVSHITLARQLFDEMSER 191

Query: 359 NVVSWTAMITGCTRVGDVGNAIALFDRVPREARDTPCWNSIIAGCAQNGMYNDAISFFKR 538
           NVVSWTAM++G  R GD+ NA+ALF+ +P   RD P WN+I+A C QNG++ +A+S F+R
Sbjct: 192 NVVSWTAMLSGYARSGDIFNAVALFEEMPE--RDVPSWNAILAACTQNGLFVEAVSLFRR 249