BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00046149
         (280 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001031892.1| RNA-directed DNA polymerase (reverse transcr...    68   7e-10
ref|NP_567266.1| RNA-directed DNA polymerase (reverse transcript...    68   7e-10
gb|ABK28243.1| unknown [Arabidopsis thaliana]                          68   7e-10
gb|ABE65512.1| hypothetical protein At4g04650 [Arabidopsis thali...    68   7e-10
ref|NP_178356.1| RNA-directed DNA polymerase (reverse transcript...    68   9e-10

>ref|NP_001031892.1| RNA-directed DNA polymerase (reverse transcriptase)-related family
           protein [Arabidopsis thaliana]
           gi|98962153|gb|ABF59406.1| unknown protein [Arabidopsis
           thaliana] gi|332004916|gb|AED92299.1| RNA-directed DNA
           polymerase (reverse transcriptase)-related family
           protein [Arabidopsis thaliana]
          Length = 209

 Score = 68.2 bits (165), Expect = 7e-10
 Identities = 29/67 (43%), Positives = 39/67 (58%), Gaps = 1/67 (1%)
 Frame = +3

Query: 9   KPPWAKLLWFKGHIPRYGFVGWVLCHNKLPTKDRFIRWGLVEERNCMFCEG-DEIISRLF 185
           K  W K +WFKG IP++ F+ WV   ++LPT+D+ + WGL     C+ C   DE    LF
Sbjct: 141 KVDWHKAIWFKGRIPKHAFISWVNIRHRLPTRDKLLSWGLHVPSLCLLCNAFDETRQHLF 200

Query: 186 FDSRFLG 206
           FD  F G
Sbjct: 201 FDCVFAG 207


>ref|NP_567266.1| RNA-directed DNA polymerase (reverse transcriptase)-related family
           protein [Arabidopsis thaliana]
           gi|5732057|gb|AAD48956.1|AF149414_5 contains similarity
           to a family of Arabidopsis thaliana predicted proteins,
           which have similarity to reverse transcriptases; see
           T14P8.10 (GB:AF069298) [Arabidopsis thaliana]
           gi|7267223|emb|CAB80830.1| AT4g04650 [Arabidopsis
           thaliana] gi|332657009|gb|AEE82409.1| RNA-directed DNA
           polymerase (reverse transcriptase)-related family
           protein [Arabidopsis thaliana]
          Length = 332

 Score = 68.2 bits (165), Expect = 7e-10
 Identities = 29/69 (42%), Positives = 42/69 (60%), Gaps = 2/69 (2%)
 Frame = +3

Query: 15  PWAKLLWFKGHIPRYGFVGWVLCHNKLPTKDRFIRWGLVEERNCMFCEG-DEIISRLFFD 191
           PW K +WFK H+P++ F+ WV+  N+L T+DR   WGL     C+ C   D+  + LFF+
Sbjct: 128 PWHKAVWFKNHVPKHAFICWVVAWNRLHTRDRLQNWGLSIPAECLLCNAHDDSRAHLFFE 187

Query: 192 SRFLG-NWR 215
            +F G  WR
Sbjct: 188 CQFSGVVWR 196


>gb|ABK28243.1| unknown [Arabidopsis thaliana]
          Length = 297

 Score = 68.2 bits (165), Expect = 7e-10
 Identities = 29/69 (42%), Positives = 42/69 (60%), Gaps = 2/69 (2%)
 Frame = +3

Query: 15  PWAKLLWFKGHIPRYGFVGWVLCHNKLPTKDRFIRWGLVEERNCMFCEG-DEIISRLFFD 191
           PW K +WFK H+P++ F+ WV+  N+L T+DR   WGL     C+ C   D+  + LFF+
Sbjct: 128 PWHKAVWFKNHVPKHAFICWVVAWNRLHTRDRLQNWGLSIPAECLLCNAHDDSRAHLFFE 187

Query: 192 SRFLG-NWR 215
            +F G  WR
Sbjct: 188 CQFSGVVWR 196


>gb|ABE65512.1| hypothetical protein At4g04650 [Arabidopsis thaliana]
          Length = 296

 Score = 68.2 bits (165), Expect = 7e-10
 Identities = 29/69 (42%), Positives = 42/69 (60%), Gaps = 2/69 (2%)
 Frame = +3

Query: 15  PWAKLLWFKGHIPRYGFVGWVLCHNKLPTKDRFIRWGLVEERNCMFCEG-DEIISRLFFD 191
           PW K +WFK H+P++ F+ WV+  N+L T+DR   WGL     C+ C   D+  + LFF+
Sbjct: 128 PWHKAVWFKNHVPKHAFICWVVAWNRLHTRDRLQNWGLSIPAECLLCNAHDDSRAHLFFE 187

Query: 192 SRFLG-NWR 215
            +F G  WR
Sbjct: 188 CQFSGVVWR 196


>ref|NP_178356.1| RNA-directed DNA polymerase (reverse transcriptase)-related family
           protein [Arabidopsis thaliana] gi|3184287|gb|AAC18934.1|
           putative non-LTR retroelement reverse transcriptase
           [Arabidopsis thaliana] gi|330250497|gb|AEC05591.1|
           RNA-directed DNA polymerase (reverse
           transcriptase)-related family protein [Arabidopsis
           thaliana]
          Length = 211

 Score = 67.8 bits (164), Expect = 9e-10
 Identities = 32/72 (44%), Positives = 42/72 (58%), Gaps = 1/72 (1%)
 Frame = +3

Query: 18  WAKLLWFKGHIPRYGFVGWVLCHNKLPTKDRFIRWGLVEERNCMFCE-GDEIISRLFFDS 194
           W K +WFKG IP++ F+ WV   ++L TKDR I WG +    C+FC   DE    LFFD 
Sbjct: 43  WFKAIWFKGKIPKHAFIAWVNMRHRLHTKDRMISWGFIFPPLCLFCNTHDETRQHLFFDC 102

Query: 195 RFLGNWRKVLMY 230
            F    R+V +Y
Sbjct: 103 EFA---REVWIY 111