BLASTX nr result

ID: Lithospermum22_contig00046126 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00046126
         (414 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004158345.1| PREDICTED: methyl-CpG-binding domain-contain...   126   2e-27
ref|XP_004141185.1| PREDICTED: methyl-CpG-binding domain-contain...   126   2e-27
ref|XP_002525350.1| DNA binding protein, putative [Ricinus commu...   121   7e-26
ref|XP_002517349.1| DNA binding protein, putative [Ricinus commu...   118   6e-25
ref|XP_002274643.2| PREDICTED: methyl-CpG-binding domain-contain...   115   4e-24

>ref|XP_004158345.1| PREDICTED: methyl-CpG-binding domain-containing protein 9-like
           [Cucumis sativus]
          Length = 1028

 Score =  126 bits (316), Expect = 2e-27
 Identities = 60/135 (44%), Positives = 88/135 (65%), Gaps = 1/135 (0%)
 Frame = +2

Query: 8   PLQYADFFVLSAGKIDVRSTYHCADQIWPVGFKSCWHDNITGSLFVSEILDGGDPGPLFR 187
           PLQ+ DFFVLS G+ID R +YH   +++PVGF+SCWHD +TGS+F++E+LDGGD GPLF+
Sbjct: 520 PLQFEDFFVLSLGEIDARPSYHEVTRVYPVGFRSCWHDKVTGSIFINEVLDGGDSGPLFK 579

Query: 188 VRRFPCCQSSIPIATTVLS-DTAHHLSDDHKETDGCVXXXXXXXXXXXXSVVPMLTDPCL 364
           VRR PC    IP+ +TVLS   + + S + ++ DG +            ++  + +D C 
Sbjct: 580 VRRCPCSAFPIPVGSTVLSKGKSENFSIEQQKEDGLI------NNSNDDNLQTIFSDVCP 633

Query: 365 PIVDDVLAPIGSAFD 409
           P  DD+L+ +G   D
Sbjct: 634 PNEDDILSCLGVCSD 648


>ref|XP_004141185.1| PREDICTED: methyl-CpG-binding domain-containing protein 9-like
           [Cucumis sativus]
          Length = 2131

 Score =  126 bits (316), Expect = 2e-27
 Identities = 60/135 (44%), Positives = 88/135 (65%), Gaps = 1/135 (0%)
 Frame = +2

Query: 8   PLQYADFFVLSAGKIDVRSTYHCADQIWPVGFKSCWHDNITGSLFVSEILDGGDPGPLFR 187
           PLQ+ DFFVLS G+ID R +YH   +++PVGF+SCWHD +TGS+F++E+LDGGD GPLF+
Sbjct: 409 PLQFEDFFVLSLGEIDARPSYHEVTRVYPVGFRSCWHDKVTGSIFINEVLDGGDSGPLFK 468

Query: 188 VRRFPCCQSSIPIATTVLS-DTAHHLSDDHKETDGCVXXXXXXXXXXXXSVVPMLTDPCL 364
           VRR PC    IP+ +TVLS   + + S + ++ DG +            ++  + +D C 
Sbjct: 469 VRRCPCSAFPIPVGSTVLSKGKSENFSIEQQKEDGLI------NNSNDDNLQTIFSDVCP 522

Query: 365 PIVDDVLAPIGSAFD 409
           P  DD+L+ +G   D
Sbjct: 523 PNEDDILSCLGVCSD 537


>ref|XP_002525350.1| DNA binding protein, putative [Ricinus communis]
           gi|223535313|gb|EEF36988.1| DNA binding protein,
           putative [Ricinus communis]
          Length = 1794

 Score =  121 bits (303), Expect = 7e-26
 Identities = 64/140 (45%), Positives = 86/140 (61%), Gaps = 5/140 (3%)
 Frame = +2

Query: 8   PLQYADFFVLSAGKIDVRSTYHCADQIWPVGFKSCWHDNITGSLFVSEILDGGDPGPLFR 187
           P+Q+ DF+VLSAG+ID R +YHC  QIWPVG+KS WHD ITGSLFV +I DGGD GP+F+
Sbjct: 65  PVQFEDFYVLSAGEIDPRPSYHCTSQIWPVGYKSSWHDKITGSLFVCDISDGGDCGPIFK 124

Query: 188 VRRFPCCQSSIPIATTVL----SDTAHHLSDDHKETDGCVXXXXXXXXXXXXSVVPMLTD 355
           V+R+PC  +  PI +T+L      T +  SD    TD                V  +L+D
Sbjct: 125 VQRYPCSTTPFPIGSTILFRPGFGTDNKKSDSTSHTDN----------NEDIDVQMILSD 174

Query: 356 PCLPIVDDVLA-PIGSAFDE 412
              P +D  L+  +G++FDE
Sbjct: 175 HSPPHLDFKLSTDVGTSFDE 194


>ref|XP_002517349.1| DNA binding protein, putative [Ricinus communis]
           gi|223543360|gb|EEF44891.1| DNA binding protein,
           putative [Ricinus communis]
          Length = 2145

 Score =  118 bits (295), Expect = 6e-25
 Identities = 49/79 (62%), Positives = 62/79 (78%)
 Frame = +2

Query: 5   LPLQYADFFVLSAGKIDVRSTYHCADQIWPVGFKSCWHDNITGSLFVSEILDGGDPGPLF 184
           LPLQ+ DFFV+S GKID R +YH    IWPVG++SCWHD +TGSLF+ E+LDGGD GP+F
Sbjct: 411 LPLQFEDFFVISLGKIDGRPSYHGPQLIWPVGYRSCWHDRVTGSLFICEVLDGGDSGPIF 470

Query: 185 RVRRFPCCQSSIPIATTVL 241
           +VRRF C    IP+ +T+L
Sbjct: 471 KVRRFSCSSIPIPVGSTIL 489


>ref|XP_002274643.2| PREDICTED: methyl-CpG-binding domain-containing protein 9-like
           [Vitis vinifera]
          Length = 2164

 Score =  115 bits (288), Expect = 4e-24
 Identities = 55/133 (41%), Positives = 81/133 (60%)
 Frame = +2

Query: 5   LPLQYADFFVLSAGKIDVRSTYHCADQIWPVGFKSCWHDNITGSLFVSEILDGGDPGPLF 184
           LP+Q+ DFFVLS G++DVR +YH  +Q+WPVG+KSCWHD +TGSLF+ ++ DGGD GP+F
Sbjct: 396 LPVQFEDFFVLSLGEVDVRPSYHDVNQLWPVGYKSCWHDKLTGSLFMCDVSDGGDSGPIF 455

Query: 185 RVRRFPCCQSSIPIATTVLSDTAHHLSDDHKETDGCVXXXXXXXXXXXXSVVPMLTDPCL 364
           +V+R  C    +P  +TVL       S+   +                 S+  +L DP  
Sbjct: 456 KVKRCACSAIPLPNGSTVLCRPNLGQSNGQDKEKSNDMISLSMDYDEDGSLQTLLADPSP 515

Query: 365 PIVDDVLAPIGSA 403
           P+ +D+L+ I S+
Sbjct: 516 PMENDILSCIRSS 528


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