BLASTX nr result

ID: Lithospermum22_contig00046100 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00046100
         (364 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002318221.1| predicted protein [Populus trichocarpa] gi|2...    73   2e-11
ref|XP_002510793.1| conserved hypothetical protein [Ricinus comm...    65   4e-09
ref|NP_200042.4| shortage in chiasmata 1 [Arabidopsis thaliana] ...    63   2e-08
gb|ACI22656.1| shortage in chiasmata [Arabidopsis thaliana]            63   2e-08
dbj|BAB10526.1| unnamed protein product [Arabidopsis thaliana]         63   2e-08

>ref|XP_002318221.1| predicted protein [Populus trichocarpa] gi|222858894|gb|EEE96441.1|
           predicted protein [Populus trichocarpa]
          Length = 1337

 Score = 73.2 bits (178), Expect = 2e-11
 Identities = 45/123 (36%), Positives = 68/123 (55%), Gaps = 2/123 (1%)
 Frame = +1

Query: 1   LGLAQFDLLDYLSEHVV--LCARVEVPHLNFFEEMELIVSIEYSNTMDHSQEIANDDLAS 174
           LG   FD+L++LS+H     C   E+  L+    M++I  +E     + S      D  S
Sbjct: 264 LGSMHFDILEFLSKHCPEKQCLEPELASLDTSLGMDIISMVEIPQGREDSA-----DCLS 318

Query: 175 SKRSYTFEEPQYLESRAAYCFEVFSGAALISEMETCETMFSEAMNFKSFNELVVSRELTL 354
                 F+E ++LE+ ++  +EVF       E +TC++MF E MNFK+F+EL+VS ELTL
Sbjct: 319 PMNPVIFQEFKFLETDSSQFYEVFFEMQSTDEPQTCDSMFREDMNFKNFDELIVSCELTL 378

Query: 355 MDD 363
            DD
Sbjct: 379 EDD 381


>ref|XP_002510793.1| conserved hypothetical protein [Ricinus communis]
           gi|223549908|gb|EEF51395.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 1318

 Score = 65.5 bits (158), Expect = 4e-09
 Identities = 42/117 (35%), Positives = 67/117 (57%)
 Frame = +1

Query: 13  QFDLLDYLSEHVVLCARVEVPHLNFFEEMELIVSIEYSNTMDHSQEIANDDLASSKRSYT 192
           Q+D+L++LS H   C     P L     M++++ ++  + +D  +E A   L  S  S  
Sbjct: 241 QYDVLEFLSNH---CLPESEPAL-----MDIVLRMDIISMVD-KEESACFSLPVS--SLV 289

Query: 193 FEEPQYLESRAAYCFEVFSGAALISEMETCETMFSEAMNFKSFNELVVSRELTLMDD 363
           F+E ++LE  ++  +EVF       + ETC+ MF E  NFK+FNEL+VS EL L+D+
Sbjct: 290 FQEYEFLEVDSSQIYEVFFEMQTAGQPETCDWMFREDKNFKNFNELIVSSELVLVDE 346


>ref|NP_200042.4| shortage in chiasmata 1 [Arabidopsis thaliana]
           gi|332008813|gb|AED96196.1| shortage in chiasmata 1
           [Arabidopsis thaliana]
          Length = 1594

 Score = 63.2 bits (152), Expect = 2e-08
 Identities = 43/123 (34%), Positives = 62/123 (50%), Gaps = 2/123 (1%)
 Frame = +1

Query: 1   LGLAQFDLLDYLSEHVVL--CARVEVPHLNFFEEMELIVSIEYSNTMDHSQEIANDDLAS 174
           +G   +DLLD LS    L    + +V   + F EM+++  +E SN  +   ++A      
Sbjct: 256 IGSKDYDLLDVLSTDCYLNKSGQSDVVPEDEFSEMDIVTILEISNAEEFQGKVAVP---- 311

Query: 175 SKRSYTFEEPQYLESRAAYCFEVFSGAALISEMETCETMFSEAMNFKSFNELVVSRELTL 354
                T+EE Q L+   +  F++F       E E C  MFS+ MNFK F+ELVVS EL  
Sbjct: 312 ----VTYEEFQILDVDISDVFDIFLCLQKAIEPEICYGMFSKEMNFKDFDELVVSSELAF 367

Query: 355 MDD 363
            DD
Sbjct: 368 TDD 370


>gb|ACI22656.1| shortage in chiasmata [Arabidopsis thaliana]
          Length = 1594

 Score = 63.2 bits (152), Expect = 2e-08
 Identities = 43/123 (34%), Positives = 62/123 (50%), Gaps = 2/123 (1%)
 Frame = +1

Query: 1   LGLAQFDLLDYLSEHVVL--CARVEVPHLNFFEEMELIVSIEYSNTMDHSQEIANDDLAS 174
           +G   +DLLD LS    L    + +V   + F EM+++  +E SN  +   ++A      
Sbjct: 256 IGSKDYDLLDVLSTDCYLNKSGQSDVVPEDEFSEMDIVTILEISNAEEFQGKVAVP---- 311

Query: 175 SKRSYTFEEPQYLESRAAYCFEVFSGAALISEMETCETMFSEAMNFKSFNELVVSRELTL 354
                T+EE Q L+   +  F++F       E E C  MFS+ MNFK F+ELVVS EL  
Sbjct: 312 ----VTYEEFQILDVDISDVFDIFLCLQKAIEPEICYGMFSKEMNFKDFDELVVSSELAF 367

Query: 355 MDD 363
            DD
Sbjct: 368 TDD 370


>dbj|BAB10526.1| unnamed protein product [Arabidopsis thaliana]
          Length = 1569

 Score = 63.2 bits (152), Expect = 2e-08
 Identities = 43/123 (34%), Positives = 62/123 (50%), Gaps = 2/123 (1%)
 Frame = +1

Query: 1   LGLAQFDLLDYLSEHVVL--CARVEVPHLNFFEEMELIVSIEYSNTMDHSQEIANDDLAS 174
           +G   +DLLD LS    L    + +V   + F EM+++  +E SN  +   ++A      
Sbjct: 231 IGSKDYDLLDVLSTDCYLNKSGQSDVVPEDEFSEMDIVTILEISNAEEFQGKVAVP---- 286

Query: 175 SKRSYTFEEPQYLESRAAYCFEVFSGAALISEMETCETMFSEAMNFKSFNELVVSRELTL 354
                T+EE Q L+   +  F++F       E E C  MFS+ MNFK F+ELVVS EL  
Sbjct: 287 ----VTYEEFQILDVDISDVFDIFLCLQKAIEPEICYGMFSKEMNFKDFDELVVSSELAF 342

Query: 355 MDD 363
            DD
Sbjct: 343 TDD 345


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