BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00046093
         (312 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003635424.1| PREDICTED: LOW QUALITY PROTEIN: putative rib...    83   1e-16
emb|CAN76892.1| hypothetical protein VITISV_005356 [Vitis vinifera]    78   4e-15
emb|CAN71438.1| hypothetical protein VITISV_011330 [Vitis vinifera]    74   7e-15
gb|AFP55557.1| non-ltr retroelement reverse transcriptase [Rosa ...    75   4e-14
dbj|BAM28750.1| reverse transcriptase-like protein, partial [Cam...    72   4e-14

>ref|XP_003635424.1| PREDICTED: LOW QUALITY PROTEIN: putative ribonuclease H protein
           At1g65750-like [Vitis vinifera]
          Length = 820

 Score = 82.8 bits (203), Expect(2) = 1e-16
 Identities = 38/74 (51%), Positives = 54/74 (72%)
 Frame = +2

Query: 2   RKKDRGLDLKDLECMNLALLARQGWRIVTRQASLLYKILKGRYFHNSNFLNAKVGSNPSF 181
           +KKD GL  + L   NLALLA+QGWR +    SL+ +I + RYF NS+FLNA++GSNPS+
Sbjct: 315 QKKDGGLGFRKLXDFNLALLAKQGWRFLRNPDSLVTRIFQARYFRNSSFLNAELGSNPSY 374

Query: 182 GWRSLIEGRKVLKK 223
            WRS++  + +LK+
Sbjct: 375 MWRSILAAQGLLKR 388



 Score = 28.5 bits (62), Expect(2) = 1e-16
 Identities = 11/35 (31%), Positives = 21/35 (60%), Gaps = 2/35 (5%)
 Frame = +1

Query: 208 KGLEKRR--WRVREGKSIDMWTELWVPRSTDFLVL 306
           +GL KR   W +  G  + +W + W+P S++ L++
Sbjct: 383 QGLLKRGCYWSIASGTKVQVWGDSWLPDSSNRLII 417


>emb|CAN76892.1| hypothetical protein VITISV_005356 [Vitis vinifera]
          Length = 1793

 Score = 77.8 bits (190), Expect(2) = 4e-15
 Identities = 38/73 (52%), Positives = 52/73 (71%)
 Frame = +2

Query: 2    RKKDRGLDLKDLECMNLALLARQGWRIVTRQASLLYKILKGRYFHNSNFLNAKVGSNPSF 181
            +KKD GL  + LE  NLALLA+QG R +    SL+  I + RYF NS+FLNA++GSNPS+
Sbjct: 1402 QKKDGGLGFRKLEDFNLALLAKQGXRFLQNLDSLVTIIFQARYFRNSSFLNAELGSNPSY 1461

Query: 182  GWRSLIEGRKVLK 220
             WRS++  + +LK
Sbjct: 1462 MWRSILAAQDLLK 1474



 Score = 28.1 bits (61), Expect(2) = 4e-15
 Identities = 7/26 (26%), Positives = 16/26 (61%)
 Frame = +1

Query: 229  WRVREGKSIDMWTELWVPRSTDFLVL 306
            W +  G  + +W + W+P S++ L++
Sbjct: 1479 WSIASGTKVQVWGDSWLPNSSNRLII 1504


>emb|CAN71438.1| hypothetical protein VITISV_011330 [Vitis vinifera]
          Length = 1484

 Score = 73.9 bits (180), Expect(2) = 7e-15
 Identities = 30/74 (40%), Positives = 51/74 (68%)
 Frame = +2

Query: 2   RKKDRGLDLKDLECMNLALLARQGWRIVTRQASLLYKILKGRYFHNSNFLNAKVGSNPSF 181
           RK++ GL  ++    NLA+L +QGW ++T+  SL+ ++LK RY+ + +FL+A++G NPSF
Sbjct: 368 RKEEGGLGFRNXRDFNLAMLGKQGWNLITKPDSLIARLLKARYYRSGDFLSARLGHNPSF 427

Query: 182 GWRSLIEGRKVLKK 223
            W+ +   R +L K
Sbjct: 428 TWKGIWSSRAILLK 441



 Score = 31.2 bits (69), Expect(2) = 7e-15
 Identities = 12/30 (40%), Positives = 19/30 (63%)
 Frame = +1

Query: 214 LEKRRWRVREGKSIDMWTELWVPRSTDFLV 303
           L+  RWR+ +G SID+W   W+  + +F V
Sbjct: 440 LKGSRWRIGDGCSIDVWNNPWLRDAENFKV 469


>gb|AFP55557.1| non-ltr retroelement reverse transcriptase [Rosa rugosa]
          Length = 1747

 Score = 75.1 bits (183), Expect(2) = 4e-14
 Identities = 34/73 (46%), Positives = 52/73 (71%)
 Frame = +2

Query: 5    KKDRGLDLKDLECMNLALLARQGWRIVTRQASLLYKILKGRYFHNSNFLNAKVGSNPSFG 184
            KKD GL  +DL   N ALL +QGWR++    SL+ ++LK +YF   +F+ A++GS+PS+ 
Sbjct: 1135 KKDGGLGFRDLSLFNQALLGKQGWRLMMYPDSLVARMLKAKYFPWDDFMEAELGSSPSYL 1194

Query: 185  WRSLIEGRKVLKK 223
            WRS + GR++L+K
Sbjct: 1195 WRSFLWGRELLRK 1207



 Score = 27.3 bits (59), Expect(2) = 4e-14
 Identities = 9/24 (37%), Positives = 15/24 (62%)
 Frame = +1

Query: 226  RWRVREGKSIDMWTELWVPRSTDF 297
            RWR+ +GK + ++ + WVP    F
Sbjct: 1210 RWRIGDGKEVRVFIDPWVPGLPSF 1233


>dbj|BAM28750.1| reverse transcriptase-like protein, partial [Camellia sinensis var.
           sinensis]
          Length = 255

 Score = 72.4 bits (176), Expect(2) = 4e-14
 Identities = 34/71 (47%), Positives = 48/71 (67%)
 Frame = +2

Query: 5   KKDRGLDLKDLECMNLALLARQGWRIVTRQASLLYKILKGRYFHNSNFLNAKVGSNPSFG 184
           K   G+  + L+  N ALLA+Q WR+V R  SL+ ++ K RYF  ++FL+A VGSNPSF 
Sbjct: 97  KLQGGMGFRCLQXFNSALLAKQCWRLVQRPQSLVARVFKARYFPQTSFLDALVGSNPSFT 156

Query: 185 WRSLIEGRKVL 217
           WRS++  R +L
Sbjct: 157 WRSIVGSRSLL 167



 Score = 30.0 bits (66), Expect(2) = 4e-14
 Identities = 13/27 (48%), Positives = 16/27 (59%)
 Frame = +1

Query: 226 RWRVREGKSIDMWTELWVPRSTDFLVL 306
           RWRV  G SI +  + WVPR   F V+
Sbjct: 172 RWRVGNGASISVKYDKWVPRPHSFKVI 198