BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00046065
         (367 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_178356.1| RNA-directed DNA polymerase (reverse transcript...    86   4e-15
ref|NP_567266.1| RNA-directed DNA polymerase (reverse transcript...    83   2e-14
gb|ABK28243.1| unknown [Arabidopsis thaliana]                          83   2e-14
gb|ABE65512.1| hypothetical protein At4g04650 [Arabidopsis thali...    83   2e-14
ref|NP_001031892.1| RNA-directed DNA polymerase (reverse transcr...    83   3e-14

>ref|NP_178356.1| RNA-directed DNA polymerase (reverse transcriptase)-related family
           protein [Arabidopsis thaliana] gi|3184287|gb|AAC18934.1|
           putative non-LTR retroelement reverse transcriptase
           [Arabidopsis thaliana] gi|330250497|gb|AEC05591.1|
           RNA-directed DNA polymerase (reverse
           transcriptase)-related family protein [Arabidopsis
           thaliana]
          Length = 211

 Score = 85.5 bits (210), Expect = 4e-15
 Identities = 37/84 (44%), Positives = 50/84 (59%), Gaps = 1/84 (1%)
 Frame = -3

Query: 254 KASGIWRSLRHQNQGPTWAKLIWFRGHIPRHCFVAWTLCQERLPTKDKLISWGMDVDRKC 75
           +A+  W  L    +   W K IWF+G IP+H F+AW   + RL TKD++ISWG      C
Sbjct: 26  EATATWLHLNPIGERVDWFKAIWFKGKIPKHAFIAWVNMRHRLHTKDRMISWGFIFPPLC 85

Query: 74  LFCG-DEESMNHLFSYCEFSRHIW 6
           LFC   +E+  HLF  CEF+R +W
Sbjct: 86  LFCNTHDETRQHLFFDCEFAREVW 109


>ref|NP_567266.1| RNA-directed DNA polymerase (reverse transcriptase)-related family
           protein [Arabidopsis thaliana]
           gi|5732057|gb|AAD48956.1|AF149414_5 contains similarity
           to a family of Arabidopsis thaliana predicted proteins,
           which have similarity to reverse transcriptases; see
           T14P8.10 (GB:AF069298) [Arabidopsis thaliana]
           gi|7267223|emb|CAB80830.1| AT4g04650 [Arabidopsis
           thaliana] gi|332657009|gb|AEE82409.1| RNA-directed DNA
           polymerase (reverse transcriptase)-related family
           protein [Arabidopsis thaliana]
          Length = 332

 Score = 83.2 bits (204), Expect = 2e-14
 Identities = 31/80 (38%), Positives = 49/80 (61%), Gaps = 1/80 (1%)
 Frame = -3

Query: 239 WRSLRHQNQGPTWAKLIWFRGHIPRHCFVAWTLCQERLPTKDKLISWGMDVDRKCLFC-G 63
           W +L  Q+    W K +WF+ H+P+H F+ W +   RL T+D+L +WG+ +  +CL C  
Sbjct: 117 WSALHPQSHTVPWHKAVWFKNHVPKHAFICWVVAWNRLHTRDRLQNWGLSIPAECLLCNA 176

Query: 62  DEESMNHLFSYCEFSRHIWR 3
            ++S  HLF  C+FS  +WR
Sbjct: 177 HDDSRAHLFFECQFSGVVWR 196


>gb|ABK28243.1| unknown [Arabidopsis thaliana]
          Length = 297

 Score = 83.2 bits (204), Expect = 2e-14
 Identities = 31/80 (38%), Positives = 49/80 (61%), Gaps = 1/80 (1%)
 Frame = -3

Query: 239 WRSLRHQNQGPTWAKLIWFRGHIPRHCFVAWTLCQERLPTKDKLISWGMDVDRKCLFC-G 63
           W +L  Q+    W K +WF+ H+P+H F+ W +   RL T+D+L +WG+ +  +CL C  
Sbjct: 117 WSALHPQSHTVPWHKAVWFKNHVPKHAFICWVVAWNRLHTRDRLQNWGLSIPAECLLCNA 176

Query: 62  DEESMNHLFSYCEFSRHIWR 3
            ++S  HLF  C+FS  +WR
Sbjct: 177 HDDSRAHLFFECQFSGVVWR 196


>gb|ABE65512.1| hypothetical protein At4g04650 [Arabidopsis thaliana]
          Length = 296

 Score = 83.2 bits (204), Expect = 2e-14
 Identities = 31/80 (38%), Positives = 49/80 (61%), Gaps = 1/80 (1%)
 Frame = -3

Query: 239 WRSLRHQNQGPTWAKLIWFRGHIPRHCFVAWTLCQERLPTKDKLISWGMDVDRKCLFC-G 63
           W +L  Q+    W K +WF+ H+P+H F+ W +   RL T+D+L +WG+ +  +CL C  
Sbjct: 117 WSALHPQSHTVPWHKAVWFKNHVPKHAFICWVVAWNRLHTRDRLQNWGLSIPAECLLCNA 176

Query: 62  DEESMNHLFSYCEFSRHIWR 3
            ++S  HLF  C+FS  +WR
Sbjct: 177 HDDSRAHLFFECQFSGVVWR 196


>ref|NP_001031892.1| RNA-directed DNA polymerase (reverse transcriptase)-related family
           protein [Arabidopsis thaliana]
           gi|98962153|gb|ABF59406.1| unknown protein [Arabidopsis
           thaliana] gi|332004916|gb|AED92299.1| RNA-directed DNA
           polymerase (reverse transcriptase)-related family
           protein [Arabidopsis thaliana]
          Length = 209

 Score = 82.8 bits (203), Expect = 3e-14
 Identities = 39/99 (39%), Positives = 54/99 (54%), Gaps = 5/99 (5%)
 Frame = -3

Query: 290 DMSTWNGSGSAAK----ASGIWRSLRHQNQGPTWAKLIWFRGHIPRHCFVAWTLCQERLP 123
           D+  W   GS A     ++  W  L    +   W K IWF+G IP+H F++W   + RLP
Sbjct: 111 DLFMWKVGGSEASVGFSSAATWIHLNPVGEKVDWHKAIWFKGRIPKHAFISWVNIRHRLP 170

Query: 122 TKDKLISWGMDVDRKCLFCGD-EESMNHLFSYCEFSRHI 9
           T+DKL+SWG+ V   CL C   +E+  HLF  C F+  I
Sbjct: 171 TRDKLLSWGLHVPSLCLLCNAFDETRQHLFFDCVFAGEI 209