BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00046062
         (393 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABA94310.1| retrotransposon protein, putative, Ty3-gypsy subc...   148   4e-34
gb|AAU43956.1| unknown protein [Oryza sativa Japonica Group] gi|...   142   3e-32
ref|XP_003560110.1| PREDICTED: uncharacterized protein LOC100846...   142   4e-32
gb|AAT85031.1| putative polyprotein [Oryza sativa Japonica Group...   142   4e-32
gb|AAP20859.1| retrotransposon protein, putative, Ty1-copia sub-...   142   4e-32

>gb|ABA94310.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
            Japonica Group]
          Length = 1762

 Score =  148 bits (374), Expect = 4e-34
 Identities = 70/135 (51%), Positives = 91/135 (67%), Gaps = 9/135 (6%)
 Frame = +2

Query: 14   SAYSDPDWAGSVEDRRSTGGHALYFGTNLVSWMXXXXXXXXXXXXEAEYKSLADCASELM 193
            SA+ D DWAGS++DRRSTGG  +YFG NLVSW             EAEYK++A+  +EL+
Sbjct: 1609 SAFFDADWAGSLDDRRSTGGFVIYFGPNLVSWSARKQRTVSRSSTEAEYKAMANATAELI 1668

Query: 194  WVSLV---------SPPVLWCNNIGAAYVAANPVYHARTKHIEIDNYFIPEKIYVNQLQV 346
            WV  V           PVLWC+N+GA Y+++NPV+HARTKHIEID +F+ E++    L +
Sbjct: 1669 WVRSVLEELGVKIDQSPVLWCDNLGATYLSSNPVFHARTKHIEIDYHFVQERVANKMLDI 1728

Query: 347  RFVSTKDQIIDIFTK 391
            RF+ TKDQI D FTK
Sbjct: 1729 RFIGTKDQIADGFTK 1743


>gb|AAU43956.1| unknown protein [Oryza sativa Japonica Group]
            gi|52353503|gb|AAU44069.1| putative polyprotein [Oryza
            sativa Japonica Group]
          Length = 1447

 Score =  142 bits (358), Expect = 3e-32
 Identities = 68/135 (50%), Positives = 93/135 (68%), Gaps = 9/135 (6%)
 Frame = +2

Query: 14   SAYSDPDWAGSVEDRRSTGGHALYFGTNLVSWMXXXXXXXXXXXXEAEYKSLADCASELM 193
            SAYSD DWAGS++DRRSTGG A++ G NLVSW             E+EYK+LA+  +E+M
Sbjct: 1294 SAYSDADWAGSLDDRRSTGGFAVFLGDNLVSWCARKQATVSRSSTESEYKALANATAEIM 1353

Query: 194  WVSLV-------SPPV--LWCNNIGAAYVAANPVYHARTKHIEIDNYFIPEKIYVNQLQV 346
            WV  +       SPP+  LWC+N+GA Y+++NPV+HARTKHIE+D +F+ E++    L++
Sbjct: 1354 WVQTLLTELQVQSPPMAKLWCDNLGAKYLSSNPVFHARTKHIEVDYHFVRERVSQKLLEI 1413

Query: 347  RFVSTKDQIIDIFTK 391
             FV T DQ+ D FTK
Sbjct: 1414 DFVPTGDQVADGFTK 1428


>ref|XP_003560110.1| PREDICTED: uncharacterized protein LOC100846463 [Brachypodium
            distachyon]
          Length = 989

 Score =  142 bits (357), Expect = 4e-32
 Identities = 68/133 (51%), Positives = 88/133 (66%), Gaps = 9/133 (6%)
 Frame = +2

Query: 20   YSDPDWAGSVEDRRSTGGHALYFGTNLVSWMXXXXXXXXXXXXEAEYKSLADCASELMWV 199
            ++D DWAG  +DRRSTGG A++ G NLVSW             EAEYK LA+  +E +W+
Sbjct: 835  FTDADWAGCSDDRRSTGGFAVFLGPNLVSWSSRKQPTVSRSSTEAEYKVLANGTAEAIWI 894

Query: 200  SLV---------SPPVLWCNNIGAAYVAANPVYHARTKHIEIDNYFIPEKIYVNQLQVRF 352
              V          PPVLWC+NIGA Y++ANPV+HARTKHIEID +F+ EK+ +  L VR 
Sbjct: 895  QSVLKELGVYQSRPPVLWCDNIGATYLSANPVFHARTKHIEIDFHFVREKVALGALDVRS 954

Query: 353  VSTKDQIIDIFTK 391
            +ST DQ+ D+FTK
Sbjct: 955  ISTADQLADVFTK 967


>gb|AAT85031.1| putative polyprotein [Oryza sativa Japonica Group]
            gi|108708884|gb|ABF96679.1| retrotransposon protein,
            putative, Ty1-copia subclass [Oryza sativa Japonica
            Group]
          Length = 1437

 Score =  142 bits (357), Expect = 4e-32
 Identities = 70/135 (51%), Positives = 92/135 (68%), Gaps = 9/135 (6%)
 Frame = +2

Query: 14   SAYSDPDWAGSVEDRRSTGGHALYFGTNLVSWMXXXXXXXXXXXXEAEYKSLADCASELM 193
            S YSD DWAG ++DRRSTGG A+Y G NLVSW             EAEYK+LA+  +E+M
Sbjct: 1278 SGYSDADWAGCLDDRRSTGGFAVYLGDNLVSWNAKKQATVSRSSTEAEYKALANATAEIM 1337

Query: 194  WV-------SLVSPPV--LWCNNIGAAYVAANPVYHARTKHIEIDNYFIPEKIYVNQLQV 346
            WV       ++VSP +  LWC+N+GA Y++ NPV+HARTKHIE+D +F+ E++    LQV
Sbjct: 1338 WVQTLLQELNIVSPAMAQLWCDNMGAKYLSFNPVFHARTKHIEVDYHFVRERVARKLLQV 1397

Query: 347  RFVSTKDQIIDIFTK 391
             +VST DQ+ D FTK
Sbjct: 1398 DYVSTNDQVADGFTK 1412


>gb|AAP20859.1| retrotransposon protein, putative, Ty1-copia sub-class [Oryza
           sativa Japonica Group]
          Length = 352

 Score =  142 bits (357), Expect = 4e-32
 Identities = 70/135 (51%), Positives = 92/135 (68%), Gaps = 9/135 (6%)
 Frame = +2

Query: 14  SAYSDPDWAGSVEDRRSTGGHALYFGTNLVSWMXXXXXXXXXXXXEAEYKSLADCASELM 193
           S YSD DWAG ++DRRSTGG A+Y G NLVSW             EAEYK+LA+  +E+M
Sbjct: 193 SGYSDADWAGCLDDRRSTGGFAVYLGDNLVSWNAKKQATVSRSSTEAEYKALANATAEIM 252

Query: 194 WV-------SLVSPPV--LWCNNIGAAYVAANPVYHARTKHIEIDNYFIPEKIYVNQLQV 346
           WV       ++VSP +  LWC+N+GA Y++ NPV+HARTKHIE+D +F+ E++    LQV
Sbjct: 253 WVQTLLQELNIVSPAMAQLWCDNMGAKYLSFNPVFHARTKHIEVDYHFVRERVARKLLQV 312

Query: 347 RFVSTKDQIIDIFTK 391
            +VST DQ+ D FTK
Sbjct: 313 DYVSTNDQVADGFTK 327