BLASTX nr result

ID: Lithospermum22_contig00046035 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00046035
         (262 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002516582.1| DNA polymerase theta, putative [Ricinus comm...    86   2e-15
ref|XP_003588560.1| DNA polymerase I family protein expressed [M...    80   2e-13
ref|XP_002869254.1| predicted protein [Arabidopsis lyrata subsp....    79   3e-13
ref|NP_001078482.1| DNA polymerase theta subunit [Arabidopsis th...    79   3e-13
emb|CAA18591.1| putative protein [Arabidopsis thaliana] gi|72701...    79   3e-13

>ref|XP_002516582.1| DNA polymerase theta, putative [Ricinus communis]
            gi|223544402|gb|EEF45923.1| DNA polymerase theta,
            putative [Ricinus communis]
          Length = 2154

 Score = 86.3 bits (212), Expect = 2e-15
 Identities = 44/58 (75%), Positives = 48/58 (82%)
 Frame = +2

Query: 11   GTAQRRIQLGVVKKIKNGARKIVLEKAEEARLTAFSAFKSLGLDVPPIFGPLSSNLPV 184
            G+AQRR+QLGV KKIKNGARKIVLEKAEEAR+ AFSAFKSLGLD+P    PL  N  V
Sbjct: 1260 GSAQRRLQLGVAKKIKNGARKIVLEKAEEARVAAFSAFKSLGLDIPQFSRPLLMNTSV 1317


>ref|XP_003588560.1| DNA polymerase I family protein expressed [Medicago truncatula]
            gi|355477608|gb|AES58811.1| DNA polymerase I family
            protein expressed [Medicago truncatula]
          Length = 2269

 Score = 79.7 bits (195), Expect = 2e-13
 Identities = 39/56 (69%), Positives = 46/56 (82%)
 Frame = +2

Query: 5    SSGTAQRRIQLGVVKKIKNGARKIVLEKAEEARLTAFSAFKSLGLDVPPIFGPLSS 172
            + G+AQR +Q GV KKIKNGARKIVL+KAEEAR+ AFSAFKSLG DVP    P+S+
Sbjct: 1320 TEGSAQRSLQFGVAKKIKNGARKIVLDKAEEARIAAFSAFKSLGYDVPQFAPPIST 1375


>ref|XP_002869254.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
            gi|297315090|gb|EFH45513.1| predicted protein
            [Arabidopsis lyrata subsp. lyrata]
          Length = 2147

 Score = 79.3 bits (194), Expect = 3e-13
 Identities = 41/54 (75%), Positives = 44/54 (81%)
 Frame = +2

Query: 5    SSGTAQRRIQLGVVKKIKNGARKIVLEKAEEARLTAFSAFKSLGLDVPPIFGPL 166
            + GT QRRI LG+ KKIKNGARKIVLEKAEEAR  AFSAFKSLGLDV  +  PL
Sbjct: 1267 AEGTGQRRIHLGLAKKIKNGARKIVLEKAEEARAAAFSAFKSLGLDVHELSKPL 1320


>ref|NP_001078482.1| DNA polymerase theta subunit [Arabidopsis thaliana]
            gi|62241195|dbj|BAD93700.1| helicase and polymerase
            containing protein TEBICHI [Arabidopsis thaliana]
            gi|332660705|gb|AEE86105.1| DNA polymerase theta subunit
            [Arabidopsis thaliana]
          Length = 2154

 Score = 79.3 bits (194), Expect = 3e-13
 Identities = 41/54 (75%), Positives = 44/54 (81%)
 Frame = +2

Query: 5    SSGTAQRRIQLGVVKKIKNGARKIVLEKAEEARLTAFSAFKSLGLDVPPIFGPL 166
            + GT QRRI LG+ KKIKNGARKIVLEKAEEAR  AFSAFKSLGLDV  +  PL
Sbjct: 1268 AEGTGQRRIHLGLAKKIKNGARKIVLEKAEEARAAAFSAFKSLGLDVNELSKPL 1321


>emb|CAA18591.1| putative protein [Arabidopsis thaliana] gi|7270174|emb|CAB79987.1|
           putative protein [Arabidopsis thaliana]
          Length = 1548

 Score = 79.3 bits (194), Expect = 3e-13
 Identities = 41/54 (75%), Positives = 44/54 (81%)
 Frame = +2

Query: 5   SSGTAQRRIQLGVVKKIKNGARKIVLEKAEEARLTAFSAFKSLGLDVPPIFGPL 166
           + GT QRRI LG+ KKIKNGARKIVLEKAEEAR  AFSAFKSLGLDV  +  PL
Sbjct: 701 AEGTGQRRIHLGLAKKIKNGARKIVLEKAEEARAAAFSAFKSLGLDVNELSKPL 754


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