BLASTX nr result

ID: Lithospermum22_contig00045956 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00045956
         (333 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003532181.1| PREDICTED: protein PLASTID MOVEMENT IMPAIRED...    79   5e-13
gb|AFK45141.1| unknown [Lotus japonicus]                               78   7e-13
ref|XP_003551426.1| PREDICTED: protein PLASTID MOVEMENT IMPAIRED...    77   1e-12
ref|NP_200397.1| uncharacterized protein [Arabidopsis thaliana] ...    75   4e-12
gb|AAY78868.1| hypothetical protein At5g55860 [Arabidopsis thali...    75   4e-12

>ref|XP_003532181.1| PREDICTED: protein PLASTID MOVEMENT IMPAIRED 2-like [Glycine max]
          Length = 653

 Score = 78.6 bits (192), Expect = 5e-13
 Identities = 51/106 (48%), Positives = 63/106 (59%), Gaps = 3/106 (2%)
 Frame = +3

Query: 3   ELRRWGEREQKKAA---SRIMAETENYSIQNQNHPAKKTEEATFISSPQMFLTQKYNLPV 173
           ELRRW EREQKKAA   SRI+AET+             TE     SSPQ +  QK N P 
Sbjct: 561 ELRRWREREQKKAAEAASRILAETQ-----------VSTE-----SSPQHYRIQKQNPPR 604

Query: 174 TKPESPKLEKSKTSVTTKALMKSLSGIFRKKRNVVEFSSPYFSPYE 311
           T  E  + EK K SV+ KAL+ ++SGIF++K+N VE  SP + P E
Sbjct: 605 TTVEVKRFEKEKVSVSKKALLPNISGIFQRKKNQVEGGSPSYLPGE 650


>gb|AFK45141.1| unknown [Lotus japonicus]
          Length = 150

 Score = 78.2 bits (191), Expect = 7e-13
 Identities = 50/106 (47%), Positives = 61/106 (57%), Gaps = 3/106 (2%)
 Frame = +3

Query: 3   ELRRWGEREQKKAA---SRIMAETENYSIQNQNHPAKKTEEATFISSPQMFLTQKYNLPV 173
           ELRRW EREQKKAA   SRI+AET       Q  P          +SPQ ++ QK N P 
Sbjct: 58  ELRRWREREQKKAAEAASRILAET-------QRSPQ---------TSPQHYMIQKQNPPH 101

Query: 174 TKPESPKLEKSKTSVTTKALMKSLSGIFRKKRNVVEFSSPYFSPYE 311
           T  E  K EK K SV+ K L+ ++SGIF +K+N VE  SP + P E
Sbjct: 102 TTVEVKKFEKEKVSVSKKVLLPNISGIFHRKKNQVEGGSPSYLPGE 147


>ref|XP_003551426.1| PREDICTED: protein PLASTID MOVEMENT IMPAIRED 2-like [Glycine max]
          Length = 653

 Score = 77.0 bits (188), Expect = 1e-12
 Identities = 50/106 (47%), Positives = 62/106 (58%), Gaps = 3/106 (2%)
 Frame = +3

Query: 3   ELRRWGEREQKKAA---SRIMAETENYSIQNQNHPAKKTEEATFISSPQMFLTQKYNLPV 173
           ELRRW EREQK+AA   SRI+AET+             TE     SSPQ +  QK N P 
Sbjct: 561 ELRRWREREQKRAAEAASRILAETQ-----------VSTE-----SSPQHYRIQKQNPPR 604

Query: 174 TKPESPKLEKSKTSVTTKALMKSLSGIFRKKRNVVEFSSPYFSPYE 311
           T  E  K EK K SV+ K L+ ++SGIF++K+N VE  SP + P E
Sbjct: 605 TMVEVKKFEKEKVSVSKKTLLPNISGIFQRKKNQVEGGSPSYLPGE 650


>ref|NP_200397.1| uncharacterized protein [Arabidopsis thaliana]
           gi|75180671|sp|Q9LVQ4.1|Y5586_ARATH RecName: Full=WEB
           family protein At5g55860 gi|8843737|dbj|BAA97285.1|
           myosin heavy chain-like [Arabidopsis thaliana]
           gi|332009309|gb|AED96692.1| uncharacterized protein
           [Arabidopsis thaliana]
          Length = 649

 Score = 75.5 bits (184), Expect = 4e-12
 Identities = 52/108 (48%), Positives = 64/108 (59%), Gaps = 4/108 (3%)
 Frame = +3

Query: 3   ELRRWGEREQKKA---ASRIMAETENYSIQNQNHPAKKTEEATFISSPQMFLTQKYNLPV 173
           ELRRW ER+QKKA   A+RI+AE E           K   E    SSPQ    Q Y  P 
Sbjct: 558 ELRRWRERDQKKAEEAATRILAEAE----------MKMASE----SSPQ----QHYKAPK 599

Query: 174 TKPESPKLEKSKTSVTTK-ALMKSLSGIFRKKRNVVEFSSPYFSPYER 314
            KP + KLEK+KTSV +K  LM +LSGIF +K+N VE+ SP + P E+
Sbjct: 600 QKPVNNKLEKTKTSVVSKKVLMPNLSGIFNRKKNQVEWGSPSYLPGEK 647


>gb|AAY78868.1| hypothetical protein At5g55860 [Arabidopsis thaliana]
          Length = 649

 Score = 75.5 bits (184), Expect = 4e-12
 Identities = 52/108 (48%), Positives = 64/108 (59%), Gaps = 4/108 (3%)
 Frame = +3

Query: 3   ELRRWGEREQKKA---ASRIMAETENYSIQNQNHPAKKTEEATFISSPQMFLTQKYNLPV 173
           ELRRW ER+QKKA   A+RI+AE E           K   E    SSPQ    Q Y  P 
Sbjct: 558 ELRRWRERDQKKAEEAATRILAEAE----------MKMASE----SSPQ----QHYKAPK 599

Query: 174 TKPESPKLEKSKTSVTTK-ALMKSLSGIFRKKRNVVEFSSPYFSPYER 314
            KP + KLEK+KTSV +K  LM +LSGIF +K+N VE+ SP + P E+
Sbjct: 600 QKPVNNKLEKTKTSVVSKKVLMPNLSGIFNRKKNQVEWGSPSYLPGEK 647


Top