BLASTX nr result

ID: Lithospermum22_contig00045939 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00045939
         (263 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002275165.2| PREDICTED: translation initiation factor eIF...    63   3e-08
ref|XP_002283177.1| PREDICTED: translation initiation factor eIF...    61   1e-07
emb|CAN69725.1| hypothetical protein VITISV_009152 [Vitis vinifera]    61   1e-07
ref|XP_002511987.1| translation initiation factor 2b, delta subu...    56   4e-06

>ref|XP_002275165.2| PREDICTED: translation initiation factor eIF-2B subunit delta-like
           [Vitis vinifera] gi|297734159|emb|CBI15406.3| unnamed
           protein product [Vitis vinifera]
          Length = 649

 Score = 62.8 bits (151), Expect = 3e-08
 Identities = 35/57 (61%), Positives = 42/57 (73%), Gaps = 6/57 (10%)
 Frame = -3

Query: 198 KVRKVGFVTPGPVPDRTQSGPVSAGS------ISPSGNSLLSPVMIIPPPRHSSDNY 46
           KVR+VGF  PG + DR+QSGP+   S      ISP+GNS LSPVM IPPPRH+SDN+
Sbjct: 14  KVRQVGFFAPGALRDRSQSGPLGFSSSPPVSNISPTGNS-LSPVM-IPPPRHASDNF 68


>ref|XP_002283177.1| PREDICTED: translation initiation factor eIF-2B subunit delta-like
           [Vitis vinifera]
          Length = 650

 Score = 60.8 bits (146), Expect = 1e-07
 Identities = 36/59 (61%), Positives = 40/59 (67%), Gaps = 5/59 (8%)
 Frame = -3

Query: 198 KVRKVGFVTPGPVPDRTQSGPVSAGS-----ISPSGNSLLSPVMIIPPPRHSSDNYARA 37
           KVR+VGF  PG  P RTQSGP  + S      SP+GNS LSPVM IPPPRH+SDN   A
Sbjct: 14  KVRQVGFFAPGASPGRTQSGPPESSSPPVADNSPTGNS-LSPVM-IPPPRHASDNLLSA 70


>emb|CAN69725.1| hypothetical protein VITISV_009152 [Vitis vinifera]
          Length = 841

 Score = 60.8 bits (146), Expect = 1e-07
 Identities = 36/59 (61%), Positives = 40/59 (67%), Gaps = 5/59 (8%)
 Frame = -3

Query: 198 KVRKVGFVTPGPVPDRTQSGPVSAGS-----ISPSGNSLLSPVMIIPPPRHSSDNYARA 37
           KVR+VGF  PG  P RTQSGP  + S      SP+GNS LSPVM IPPPRH+SDN   A
Sbjct: 79  KVRQVGFFAPGASPGRTQSGPPESSSPPVADNSPTGNS-LSPVM-IPPPRHASDNLLSA 135


>ref|XP_002511987.1| translation initiation factor 2b, delta subunit, putative [Ricinus
           communis] gi|223549167|gb|EEF50656.1| translation
           initiation factor 2b, delta subunit, putative [Ricinus
           communis]
          Length = 664

 Score = 55.8 bits (133), Expect = 4e-06
 Identities = 36/58 (62%), Positives = 39/58 (67%), Gaps = 6/58 (10%)
 Frame = -3

Query: 198 KVRKVGFVTPG--PVPDRTQSGPVSAGSI----SPSGNSLLSPVMIIPPPRHSSDNYA 43
           KVR+VGF TP   P P RTQSGP  A S     SP+ NSL SPVMI PPPRH SD+ A
Sbjct: 12  KVRQVGFFTPNEPPAPSRTQSGPPDATSPPLSNSPASNSL-SPVMI-PPPRHLSDSLA 67


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