BLASTX nr result

ID: Lithospermum22_contig00045859 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00045859
         (257 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI28998.3| unnamed protein product [Vitis vinifera]               61   8e-08
ref|XP_002267326.1| PREDICTED: pentatricopeptide repeat-containi...    61   8e-08
ref|XP_003551787.1| PREDICTED: pentatricopeptide repeat-containi...    59   3e-07
ref|XP_003530462.1| PREDICTED: pentatricopeptide repeat-containi...    59   4e-07
ref|XP_004143701.1| PREDICTED: pentatricopeptide repeat-containi...    59   5e-07

>emb|CBI28998.3| unnamed protein product [Vitis vinifera]
          Length = 732

 Score = 61.2 bits (147), Expect = 8e-08
 Identities = 33/82 (40%), Positives = 51/82 (62%)
 Frame = +1

Query: 1   GEVRDWLLGLQFYCLAIQSGFIWDKLVVSSLISMFSKCDSIDMVHSVYDPAPCKNTDDGS 180
           GE  D + GLQF+CLA + G   +  V SSLI+MFS+C ++ M   V+D AP K+    +
Sbjct: 295 GEALDLVSGLQFHCLAFRFGISDEASVTSSLINMFSRCGAMRMACLVFDSAPFKSIHTCN 354

Query: 181 DIVSSYSDLNLNIETLSVFQDL 246
           +++S Y+    N E L++F +L
Sbjct: 355 EMISGYNLNCHNAEALNLFCNL 376


>ref|XP_002267326.1| PREDICTED: pentatricopeptide repeat-containing protein At3g09040,
           mitochondrial-like [Vitis vinifera]
          Length = 708

 Score = 61.2 bits (147), Expect = 8e-08
 Identities = 33/82 (40%), Positives = 51/82 (62%)
 Frame = +1

Query: 1   GEVRDWLLGLQFYCLAIQSGFIWDKLVVSSLISMFSKCDSIDMVHSVYDPAPCKNTDDGS 180
           GE  D + GLQF+CLA + G   +  V SSLI+MFS+C ++ M   V+D AP K+    +
Sbjct: 271 GEALDLVSGLQFHCLAFRFGISDEASVTSSLINMFSRCGAMRMACLVFDSAPFKSIHTCN 330

Query: 181 DIVSSYSDLNLNIETLSVFQDL 246
           +++S Y+    N E L++F +L
Sbjct: 331 EMISGYNLNCHNAEALNLFCNL 352


>ref|XP_003551787.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g02330-like [Glycine max]
          Length = 852

 Score = 59.3 bits (142), Expect = 3e-07
 Identities = 31/81 (38%), Positives = 48/81 (59%)
 Frame = +1

Query: 7   VRDWLLGLQFYCLAIQSGFIWDKLVVSSLISMFSKCDSIDMVHSVYDPAPCKNTDDGSDI 186
           + D+ LGLQ +CLAIQ GF  D +  S+L+ M+SKC  +D    V+   P +N    S +
Sbjct: 151 IEDYGLGLQVHCLAIQMGFENDVVTGSALVDMYSKCKKLDDAFRVFREMPERNLVCWSAV 210

Query: 187 VSSYSDLNLNIETLSVFQDLL 249
           ++ Y   +  IE L +F+D+L
Sbjct: 211 IAGYVQNDRFIEGLKLFKDML 231


>ref|XP_003530462.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g02330-like [Glycine max]
          Length = 852

 Score = 58.9 bits (141), Expect = 4e-07
 Identities = 30/81 (37%), Positives = 48/81 (59%)
 Frame = +1

Query: 7   VRDWLLGLQFYCLAIQSGFIWDKLVVSSLISMFSKCDSIDMVHSVYDPAPCKNTDDGSDI 186
           + D+ LGLQ +CLAIQ GF  D +  S+L+ M+SKC  +D    ++   P +N    S +
Sbjct: 151 IEDYGLGLQVHCLAIQMGFENDVVTGSALVDMYSKCKKLDGAFRIFREMPERNLVCWSAV 210

Query: 187 VSSYSDLNLNIETLSVFQDLL 249
           ++ Y   +  IE L +F+D+L
Sbjct: 211 IAGYVQNDRFIEGLKLFKDML 231


>ref|XP_004143701.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g13650-like [Cucumis sativus]
          Length = 759

 Score = 58.5 bits (140), Expect = 5e-07
 Identities = 31/83 (37%), Positives = 47/83 (56%)
 Frame = +1

Query: 1   GEVRDWLLGLQFYCLAIQSGFIWDKLVVSSLISMFSKCDSIDMVHSVYDPAPCKNTDDGS 180
           G + D  LG QF+ LA+  GF+ +  V+SS+ISMFS+   ++MVHSV+D    K     +
Sbjct: 322 GVLLDSRLGFQFFSLAVHLGFLDETRVLSSIISMFSQFGLMEMVHSVFDSLVFKPVSAWN 381

Query: 181 DIVSSYSDLNLNIETLSVFQDLL 249
             + +YS  +  +E    F  LL
Sbjct: 382 QFILAYSSNSFEMEAFRTFSSLL 404


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