BLASTX nr result

ID: Lithospermum22_contig00045856 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00045856
         (305 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002308504.1| f-box family protein [Populus trichocarpa] g...    96   3e-18
ref|XP_002281088.1| PREDICTED: F-box only protein 13-like [Vitis...    94   1e-17
ref|XP_002516174.1| ubiquitin-protein ligase, putative [Ricinus ...    92   3e-17
ref|NP_001240018.1| uncharacterized protein LOC100801096 [Glycin...    87   1e-15
ref|XP_003522327.1| PREDICTED: F-box only protein 13-like [Glyci...    86   3e-15

>ref|XP_002308504.1| f-box family protein [Populus trichocarpa]
           gi|222854480|gb|EEE92027.1| f-box family protein
           [Populus trichocarpa]
          Length = 409

 Score = 95.9 bits (237), Expect = 3e-18
 Identities = 50/96 (52%), Positives = 69/96 (71%)
 Frame = +1

Query: 16  DSSYKLVSVSGEFQELSLRVYSSRSQLWEEEVTLRRNNHTTFGTSKDHDGDEESSEYFLS 195
           + SYKLV VSGE  +LS +VY+S +  W EE+ LRR        S++ D +++++ YFLS
Sbjct: 173 NQSYKLVLVSGELPKLSCKVYNSSTGCWGEEIFLRRK----VDESQEFDSNDDNAVYFLS 228

Query: 196 KWGNVVSPNLQRSPCKRYSSVIVEKGGEEIMYFLNS 303
           K GNVV+ ++QRSP K+YSSVI  K GEEI+YFL+S
Sbjct: 229 KAGNVVATDMQRSPSKQYSSVITVKDGEEIVYFLSS 264


>ref|XP_002281088.1| PREDICTED: F-box only protein 13-like [Vitis vinifera]
          Length = 472

 Score = 94.0 bits (232), Expect = 1e-17
 Identities = 49/95 (51%), Positives = 63/95 (66%), Gaps = 1/95 (1%)
 Frame = +1

Query: 22  SYKLVSVSGEFQELSLRVYSSRSQLWEEEVTLRRNNHTTFGTSKDHDGDEESSEYFLSKW 201
           SYKLV V GE   L+ R+Y+S   LWEEE+ L R       + +    D++ + YFLS  
Sbjct: 233 SYKLVLVYGELSSLTFRIYNSSVNLWEEEIRLSRKAENPENSFQSDPDDDDETVYFLSIT 292

Query: 202 GNVVSPNLQRSPCKRYSSVIVEK-GGEEIMYFLNS 303
           GNVV+ N+QRSP K+YSSVI  K GGEEI+YFL+S
Sbjct: 293 GNVVATNMQRSPSKQYSSVITRKDGGEEIVYFLSS 327


>ref|XP_002516174.1| ubiquitin-protein ligase, putative [Ricinus communis]
           gi|223544660|gb|EEF46176.1| ubiquitin-protein ligase,
           putative [Ricinus communis]
          Length = 412

 Score = 92.4 bits (228), Expect = 3e-17
 Identities = 47/94 (50%), Positives = 66/94 (70%)
 Frame = +1

Query: 22  SYKLVSVSGEFQELSLRVYSSRSQLWEEEVTLRRNNHTTFGTSKDHDGDEESSEYFLSKW 201
           SYKLV VSGE  +LS R+Y+S +  W+EE+ L+R        S++ D  ++++ YFLSK 
Sbjct: 178 SYKLVLVSGELPKLSCRMYNSSANCWDEEILLKRK----VDESQEFDAADDNAVYFLSKA 233

Query: 202 GNVVSPNLQRSPCKRYSSVIVEKGGEEIMYFLNS 303
           GNVV+ ++QRSP K+YSSV+  K GEE  YFL+S
Sbjct: 234 GNVVATDMQRSPSKQYSSVMTVKNGEETAYFLSS 267


>ref|NP_001240018.1| uncharacterized protein LOC100801096 [Glycine max]
           gi|255638928|gb|ACU19766.1| unknown [Glycine max]
          Length = 407

 Score = 87.4 bits (215), Expect = 1e-15
 Identities = 49/95 (51%), Positives = 62/95 (65%), Gaps = 1/95 (1%)
 Frame = +1

Query: 22  SYKLVSVSGEFQELSLRVYSSRSQLWEEEVTLRRNNHTTFGTSKDHDG-DEESSEYFLSK 198
           SYK+V V GE   L  +VY+S S  WE+E  LRRN       S D D  D+++  YFLSK
Sbjct: 171 SYKIVLVFGELPNLLFKVYNSGSSCWEDEAALRRN---VDDNSMDCDSTDDDNVVYFLSK 227

Query: 199 WGNVVSPNLQRSPCKRYSSVIVEKGGEEIMYFLNS 303
            G VV  ++QRSP K+YSSVI  K G+EI+YFL+S
Sbjct: 228 AGTVVVSSMQRSPSKQYSSVITNKDGQEIVYFLSS 262


>ref|XP_003522327.1| PREDICTED: F-box only protein 13-like [Glycine max]
          Length = 413

 Score = 85.9 bits (211), Expect = 3e-15
 Identities = 46/94 (48%), Positives = 62/94 (65%)
 Frame = +1

Query: 22  SYKLVSVSGEFQELSLRVYSSRSQLWEEEVTLRRNNHTTFGTSKDHDGDEESSEYFLSKW 201
           S+K+V V GE   L  +VY+S S  WE E  LRR    T   S ++D  +++  YFLSK 
Sbjct: 178 SFKIVLVFGELPNLLFKVYNSGSNCWEGETALRRK---TEDNSIEYDSTDDNVVYFLSKA 234

Query: 202 GNVVSPNLQRSPCKRYSSVIVEKGGEEIMYFLNS 303
           G VV+ N+QRSP K++SSVI  K G+EI+YFL+S
Sbjct: 235 GFVVASNMQRSPSKQFSSVITNKDGQEIVYFLSS 268


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