BLASTX nr result

ID: Lithospermum22_contig00045758 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00045758
         (741 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_174931.1| endonuclease/exonuclease/phosphatase domain-con...    67   3e-09
ref|XP_002331338.1| predicted protein [Populus trichocarpa] gi|2...    62   4e-09
gb|AAD32866.1|AC005489_4 F14N23.4 [Arabidopsis thaliana]               65   2e-08
dbj|BAF00918.1| putative reverse transcriptase [Arabidopsis thal...    65   2e-08
emb|CCI55298.1| PH01B001G05.21 [Phyllostachys edulis]                  64   3e-08

>ref|NP_174931.1| endonuclease/exonuclease/phosphatase domain-containing protein
           [Arabidopsis thaliana] gi|332193787|gb|AEE31908.1|
           endonuclease/exonuclease/phosphatase domain-containing
           protein [Arabidopsis thaliana]
          Length = 426

 Score = 67.4 bits (163), Expect = 3e-09
 Identities = 43/132 (32%), Positives = 67/132 (50%), Gaps = 3/132 (2%)
 Frame = -2

Query: 479 NEAWIVGGDFNVVRAVSESCGGKVANLSI--VSNFNDCVRDVSLVEHPRTGRLYT*SRNW 306
           N  W+V GDFN + +V+E      +N+S+  + +   C+RD  LV+ P  G LYT S + 
Sbjct: 119 NSPWLVVGDFNQIASVTEHYSLMPSNISLQGLEDLQACMRDSDLVDLPCRGVLYTWSNHQ 178

Query: 305 KEDGMVRVLDRVLCNFR*MGEFNQCVVNIPVPSDFDHCPLDITMEEG-LLGKPKPFKYQA 129
           +++ ++R LDR + N   +  F         PSD DH    + +     L K K FKY +
Sbjct: 179 QDNPILRKLDRAIVNGCWLATFPTASAIFDPPSDSDHAACMVILNNSPPLSKKKSFKYFS 238

Query: 128 FWLSMTSFIVSL 93
           F  +   FI S+
Sbjct: 239 FLSTHPDFISSI 250


>ref|XP_002331338.1| predicted protein [Populus trichocarpa] gi|222873371|gb|EEF10502.1|
           predicted protein [Populus trichocarpa]
          Length = 819

 Score = 62.4 bits (150), Expect(2) = 4e-09
 Identities = 39/144 (27%), Positives = 66/144 (45%), Gaps = 2/144 (1%)
 Frame = -2

Query: 470 WIVGGDFNVVRAVSESCGGKVANLSIVSNFNDCVRDVSLVEHPRTGRLYT*SRNWKEDGM 291
           WI+ GDFN +R  S+  GG       +   + C+R+  + +   +G  YT S    E+ +
Sbjct: 513 WILIGDFNAIRNQSDRLGGSTTWAGTMDRLDTCIREAKVDDLRYSGMHYTWSNQCPENLI 572

Query: 290 VRVLDRVLCNFR*MGEFNQCVVNIPVPSDFDHCPLDITMEEGLLGKPKPFKYQAFWLSMT 111
           +R LDRVL N +   +F             DH P+ + +      K KPF++   W+   
Sbjct: 573 MRKLDRVLVNEKWNLKFPLSEARFLPSGMSDHSPMVVKVIGNDQNKKKPFRFFDMWMDHD 632

Query: 110 SFIVSLKRYGVRNMK--EMGWMCC 45
            F+  +K+   +N +   M  +CC
Sbjct: 633 EFMPLVKKVWDQNSRGCPMYQLCC 656



 Score = 24.6 bits (52), Expect(2) = 4e-09
 Identities = 19/60 (31%), Positives = 27/60 (45%)
 Frame = -3

Query: 718 SWKFVHNIIPDKIGRIVVC*NPQSVQFYLVVSDKQQMMGKVQNRSEPNKKFLLSDVYGKN 539
           SW F++N      GRI VC N  +V+  +     Q +   V   +  N  F  S +YG N
Sbjct: 431 SWSFLYNYDFSCRGRIWVCWNADTVKVDVFGMSDQAIHVSVTILA-TNISFNTSIIYGDN 489


>gb|AAD32866.1|AC005489_4 F14N23.4 [Arabidopsis thaliana]
          Length = 1161

 Score = 64.7 bits (156), Expect = 2e-08
 Identities = 40/128 (31%), Positives = 62/128 (48%), Gaps = 2/128 (1%)
 Frame = -2

Query: 470 WIVGGDFNVVRAVSE--SCGGKVANLSIVSNFNDCVRDVSLVEHPRTGRLYT*SRNWKED 297
           W++ GDFN + A SE  S    + NL  + +   C+RD  L + P  G  +T S + +++
Sbjct: 180 WLLLGDFNQIAAASEHYSINQSLLNLRGMEDLQCCLRDSQLSDLPSRGVFFTWSNHQQDN 239

Query: 296 GMVRVLDRVLCNFR*MGEFNQCVVNIPVPSDFDHCPLDITMEEGLLGKPKPFKYQAFWLS 117
            ++R LDR L N      F   +     P D DH P  I ++       K FKY +F  S
Sbjct: 240 PILRKLDRALANGEWFAVFPSALAVFDPPGDSDHAPCIILIDNQPPPSKKSFKYFSFLSS 299

Query: 116 MTSFIVSL 93
             S++ +L
Sbjct: 300 HPSYLAAL 307


>dbj|BAF00918.1| putative reverse transcriptase [Arabidopsis thaliana]
          Length = 910

 Score = 64.7 bits (156), Expect = 2e-08
 Identities = 40/128 (31%), Positives = 62/128 (48%), Gaps = 2/128 (1%)
 Frame = -2

Query: 470 WIVGGDFNVVRAVSE--SCGGKVANLSIVSNFNDCVRDVSLVEHPRTGRLYT*SRNWKED 297
           W++ GDFN + A SE  S    + NL  + +   C+RD  L + P  G  +T S + +++
Sbjct: 137 WLLLGDFNQIAAASEHYSINQSLLNLRGMEDLQCCLRDSQLSDLPSRGVFFTWSNHQQDN 196

Query: 296 GMVRVLDRVLCNFR*MGEFNQCVVNIPVPSDFDHCPLDITMEEGLLGKPKPFKYQAFWLS 117
            ++R LDR L N      F   +     P D DH P  I ++       K FKY +F  S
Sbjct: 197 PILRKLDRALANGEWFAVFPSALAVFDPPGDSDHAPCIILIDNQPPPSKKSFKYFSFLSS 256

Query: 116 MTSFIVSL 93
             S++ +L
Sbjct: 257 HPSYLAAL 264


>emb|CCI55298.1| PH01B001G05.21 [Phyllostachys edulis]
          Length = 461

 Score = 63.9 bits (154), Expect = 3e-08
 Identities = 40/126 (31%), Positives = 64/126 (50%)
 Frame = -2

Query: 470 WIVGGDFNVVRAVSESCGGKVANLSIVSNFNDCVRDVSLVEHPRTGRLYT*SRNWKEDGM 291
           W+V GDFN++R  ++     + N +++++F   +    L E     R +T S       +
Sbjct: 53  WLVLGDFNLIRQAADKNNSNI-NPTLMAHFQSTLNSCELKEIHLQNRKFTWSNERLRPTL 111

Query: 290 VRVLDRVLCNFR*MGEFNQCVVNIPVPSDFDHCPLDITMEEGLLGKPKPFKYQAFWLSMT 111
           VR LDRV CN      F   V+     S  DHCPL ++   G  G+PK F++++FW  M 
Sbjct: 112 VR-LDRVFCNTGWDTLFENHVLQALSSSISDHCPLLLSNTSGP-GRPKTFRFESFWTKMP 169

Query: 110 SFIVSL 93
            F+ +L
Sbjct: 170 GFLETL 175


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