BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00045733
         (312 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABF97393.1| retrotransposon protein, putative, Ty1-copia subc...   108   4e-22
gb|AAR06328.1| putative polyprotein [Oryza sativa Japonica Group]     108   4e-22
gb|ABA99022.2| retrotransposon protein, putative, Ty1-copia subc...   107   1e-21
gb|AAK52165.1|AC084831_19 putative polyprotein [Oryza sativa Jap...   106   2e-21
gb|ABF97213.1| retrotransposon protein, putative, Ty1-copia subc...   105   5e-21

>gb|ABF97393.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
           Japonica Group]
          Length = 1073

 Score =  108 bits (270), Expect = 4e-22
 Identities = 51/101 (50%), Positives = 70/101 (69%)
 Frame = +3

Query: 9   MEKLFLKAAHNERYDTVCALIDCKLGNGQPVSPHVIKMIGLVEWLDSLGSAVSREVVVDI 188
           +  +F   A  ER++T  +L  C+L  G PVSPHVIKMIG  E LD LG  +SRE+  D+
Sbjct: 195 LRNMFEDQARAERFNTSKSLFACRLAEGNPVSPHVIKMIGYTESLDKLGFPLSRELATDL 254

Query: 189 ILKSLPDSFSNFVMNFNMHQFHKSLLELHGMITNVEQNLKK 311
           IL+SLP SF  F+MNFNM+  +++L ELHGM+   E+++KK
Sbjct: 255 ILQSLPPSFEPFIMNFNMNNLNRTLAELHGMLKTAEESIKK 295


>gb|AAR06328.1| putative polyprotein [Oryza sativa Japonica Group]
          Length = 1063

 Score =  108 bits (270), Expect = 4e-22
 Identities = 51/101 (50%), Positives = 70/101 (69%)
 Frame = +3

Query: 9   MEKLFLKAAHNERYDTVCALIDCKLGNGQPVSPHVIKMIGLVEWLDSLGSAVSREVVVDI 188
           +  +F   A  ER++T  +L  C+L  G PVSPHVIKMIG  E LD LG  +SRE+  D+
Sbjct: 195 LRNMFEDQARAERFNTSKSLFACRLAEGNPVSPHVIKMIGYTESLDKLGFPLSRELATDL 254

Query: 189 ILKSLPDSFSNFVMNFNMHQFHKSLLELHGMITNVEQNLKK 311
           IL+SLP SF  F+MNFNM+  +++L ELHGM+   E+++KK
Sbjct: 255 ILQSLPPSFEPFIMNFNMNNLNRTLAELHGMLKTAEESIKK 295


>gb|ABA99022.2| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
           Japonica Group]
          Length = 829

 Score =  107 bits (266), Expect = 1e-21
 Identities = 50/101 (49%), Positives = 70/101 (69%)
 Frame = +3

Query: 9   MEKLFLKAAHNERYDTVCALIDCKLGNGQPVSPHVIKMIGLVEWLDSLGSAVSREVVVDI 188
           +  +F   A  ER++T  +L  C+L  G PVSPHVIK+IG  E LD LG  +SRE+  D+
Sbjct: 182 LRNMFEDQARAERFNTSKSLFACRLAEGNPVSPHVIKIIGYTESLDKLGFPLSRELATDL 241

Query: 189 ILKSLPDSFSNFVMNFNMHQFHKSLLELHGMITNVEQNLKK 311
           IL+SLP SF  F+MNFNM+  +++L ELHGM+   E+++KK
Sbjct: 242 ILQSLPPSFEPFIMNFNMNNLNRTLAELHGMLKTAEESIKK 282


>gb|AAK52165.1|AC084831_19 putative polyprotein [Oryza sativa Japonica Group]
           gi|108709282|gb|ABF97077.1| retrotransposon protein,
           putative, Ty1-copia subclass [Oryza sativa Japonica
           Group]
          Length = 262

 Score =  106 bits (265), Expect = 2e-21
 Identities = 51/101 (50%), Positives = 69/101 (68%)
 Frame = +3

Query: 9   MEKLFLKAAHNERYDTVCALIDCKLGNGQPVSPHVIKMIGLVEWLDSLGSAVSREVVVDI 188
           +  +F   A  ER++T+ +L  C+L  G PVS HVIKMIG  E LD LG  +SRE+  D+
Sbjct: 103 LRNMFEDQARAERFNTLKSLFACRLAEGNPVSLHVIKMIGYTESLDKLGCPLSRELATDL 162

Query: 189 ILKSLPDSFSNFVMNFNMHQFHKSLLELHGMITNVEQNLKK 311
           IL+SLP SF  F+MNFNM+  + SL ELHGM+   E+++KK
Sbjct: 163 ILQSLPPSFEPFIMNFNMNNLNSSLAELHGMLKTAEESIKK 203


>gb|ABF97213.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
           Japonica Group]
          Length = 1142

 Score =  105 bits (261), Expect = 5e-21
 Identities = 50/93 (53%), Positives = 67/93 (72%)
 Frame = +3

Query: 33  AHNERYDTVCALIDCKLGNGQPVSPHVIKMIGLVEWLDSLGSAVSREVVVDIILKSLPDS 212
           A  ER +T  +L  C+L  G PVSPHVIKMIG  E LD LG  ++RE+V D+IL+SLP S
Sbjct: 163 ARAERSNTSKSLFACRLAEGNPVSPHVIKMIGYTESLDKLGFPLNRELVTDLILQSLPPS 222

Query: 213 FSNFVMNFNMHQFHKSLLELHGMITNVEQNLKK 311
           F  F+MNFNM+  +++L ELHGM+   E+++KK
Sbjct: 223 FEPFIMNFNMNNLNRTLAELHGMLKTAEESIKK 255