BLASTX nr result

ID: Lithospermum22_contig00045728 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00045728
         (285 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002461200.1| hypothetical protein SORBIDRAFT_02g042745 [S...    62   4e-08
ref|XP_003576632.1| PREDICTED: putative ribonuclease H protein A...    57   2e-06
emb|CAH65761.1| H0215A08.3 [Oryza sativa Indica Group]                 57   2e-06
gb|EAZ38029.1| hypothetical protein OsJ_22373 [Oryza sativa Japo...    56   3e-06
gb|ABD65056.1| hypothetical protein 27.t00122 [Brassica oleracea]      55   8e-06

>ref|XP_002461200.1| hypothetical protein SORBIDRAFT_02g042745 [Sorghum bicolor]
           gi|241924577|gb|EER97721.1| hypothetical protein
           SORBIDRAFT_02g042745 [Sorghum bicolor]
          Length = 230

 Score = 62.4 bits (150), Expect = 4e-08
 Identities = 31/94 (32%), Positives = 47/94 (50%), Gaps = 3/94 (3%)
 Frame = +1

Query: 1   RNQGVRVKGHCILCNEAPETLNHLLLSCPFSGRLW---FMSP**LLTRDNTGSSFRDWWN 171
           R  G+R +  C LC++  ET++HLL++C FS  +W    M    L      GS+ +DWW 
Sbjct: 98  RRHGLRAEAACALCSQHDETVDHLLIACVFSRDVWSRLLMRAGLLRLTPTDGSALQDWWI 157

Query: 172 MLGTQFKHQHVEEIFNQVSCVLWFIWKYKNNKIF 273
               Q  H       + V  V W +WK +N++ F
Sbjct: 158 SSRQQIPHSFCCAFDSMVIIVSWNVWKERNDRTF 191


>ref|XP_003576632.1| PREDICTED: putative ribonuclease H protein At1g65750-like
           [Brachypodium distachyon]
          Length = 475

 Score = 56.6 bits (135), Expect = 2e-06
 Identities = 28/91 (30%), Positives = 44/91 (48%), Gaps = 3/91 (3%)
 Frame = +1

Query: 10  GVRVKGHCILCNEAPETLNHLLLSCPFSGRLWFMSP**LLTR---DNTGSSFRDWWNMLG 180
           G+     C LC++  ET+NHLL+ CPFS  +W+     + +      TG SF DWW    
Sbjct: 369 GLAHASRCSLCDQTMETMNHLLVDCPFSRSVWYEVLSWIRSTGAPPTTGVSFADWWQASV 428

Query: 181 TQFKHQHVEEIFNQVSCVLWFIWKYKNNKIF 273
                   +   + +    W+IWK++N  +F
Sbjct: 429 HSAPSVARKGTSSIIMLTAWWIWKHRNAAVF 459


>emb|CAH65761.1| H0215A08.3 [Oryza sativa Indica Group]
          Length = 1186

 Score = 56.6 bits (135), Expect = 2e-06
 Identities = 29/94 (30%), Positives = 50/94 (53%), Gaps = 3/94 (3%)
 Frame = +1

Query: 1    RNQGVRVKGHCILCNEAPETLNHLLLSCPFSGRLWFMSP**LLTRD---NTGSSFRDWWN 171
            R++G+     C+LC++  E+++H+L+ CP S +LW+ +   L+  D   +   SF  W  
Sbjct: 1052 RSRGLPHPDRCVLCDQQEESIDHILVGCPESRQLWWWTLRALVIPDCLPSNEPSFHLWLC 1111

Query: 172  MLGTQFKHQHVEEIFNQVSCVLWFIWKYKNNKIF 273
                + + QH        + V W IWK +NN+IF
Sbjct: 1112 GSRMKLREQHRRGFDTIATLVAWSIWKERNNRIF 1145


>gb|EAZ38029.1| hypothetical protein OsJ_22373 [Oryza sativa Japonica Group]
          Length = 273

 Score = 56.2 bits (134), Expect = 3e-06
 Identities = 30/91 (32%), Positives = 44/91 (48%), Gaps = 10/91 (10%)
 Frame = +1

Query: 31  CILCNEAPETLNHLLLSCPFSGRLWFMSP**LLTRDNTGSS----------FRDWWNMLG 180
           C+LCN   E+ +HLLL CPFS R+W       L R   G+S          F DWW    
Sbjct: 158 CVLCNGDQESCDHLLLQCPFSNRVWG------LVRTWIGTSFPLPGEDNWEFADWWMKAR 211

Query: 181 TQFKHQHVEEIFNQVSCVLWFIWKYKNNKIF 273
           + F+ +      +    + WF+W+ +N +IF
Sbjct: 212 SCFQTRSRGAFDSLCLLICWFVWRERNFRIF 242


>gb|ABD65056.1| hypothetical protein 27.t00122 [Brassica oleracea]
          Length = 239

 Score = 54.7 bits (130), Expect = 8e-06
 Identities = 26/84 (30%), Positives = 44/84 (52%), Gaps = 1/84 (1%)
 Frame = +1

Query: 31  CILCNEAPETLNHLLLSCPFSGRLWFMSP**LLTRDNTGSSFRDWWN-MLGTQFKHQHVE 207
           C  C +  ET+NH+L  CPF+ + W +    +  R+    S  D ++ +L    K    E
Sbjct: 26  CPRCGQHEETVNHMLFECPFATQTWSLETLPIEPRELPRPSIFDNFDYLLHRIHKRNGTE 85

Query: 208 EIFNQVSCVLWFIWKYKNNKIFGD 279
           E   ++  +LWF+WK +N K+F +
Sbjct: 86  ECLARIPWILWFLWKARNEKVFNN 109


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