BLASTX nr result

ID: Lithospermum22_contig00045666 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00045666
         (348 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003613273.1| RING finger protein [Medicago truncatula] gi...    92   3e-17
ref|XP_003517782.1| PREDICTED: RING-H2 finger protein ATL47-like...    92   4e-17
ref|XP_002521028.1| ring finger protein, putative [Ricinus commu...    92   4e-17
ref|XP_003519814.1| PREDICTED: RING-H2 finger protein ATL46-like...    91   1e-16
ref|XP_002265075.2| PREDICTED: RING-H2 finger protein ATL46-like...    91   1e-16

>ref|XP_003613273.1| RING finger protein [Medicago truncatula]
           gi|355514608|gb|AES96231.1| RING finger protein
           [Medicago truncatula]
          Length = 368

 Score = 92.4 bits (228), Expect = 3e-17
 Identities = 56/112 (50%), Positives = 65/112 (58%), Gaps = 6/112 (5%)
 Frame = -1

Query: 321 SSSTGNKISPXXXXXXXXXXXXXXXXXXIYFLYKVLKKSRSPS------LSQSTRNLDMS 160
           SSS+GNKISP                  ++ L + L K RS S      +SQS R  +MS
Sbjct: 38  SSSSGNKISPAILFIIVILAIIFFILGFLHLLVRFLIKHRSSSSSSTTTISQSNRFPEMS 97

Query: 159 ISGAXXXXXXXXXXXHDSGLDQAFIDALPVFIYKDLMGEKEPFDCAVCLCEF 4
            S A           HDSGLDQAFIDALPVFIYK+++G KEPFDCAVCLCEF
Sbjct: 98  ESDAYQRQLQQLFNLHDSGLDQAFIDALPVFIYKEIIGLKEPFDCAVCLCEF 149


>ref|XP_003517782.1| PREDICTED: RING-H2 finger protein ATL47-like [Glycine max]
          Length = 376

 Score = 92.0 bits (227), Expect = 4e-17
 Identities = 54/109 (49%), Positives = 64/109 (58%), Gaps = 3/109 (2%)
 Frame = -1

Query: 321 SSSTGNKISPXXXXXXXXXXXXXXXXXXIYFLYKVLKKSRSPS---LSQSTRNLDMSISG 151
           +SS+GN+ISP                  ++ L + L K RS S   +SQS R  DMS S 
Sbjct: 48  TSSSGNRISPAILVIIVILAVVFFILGFLHLLVRFLIKQRSSSNSSISQSNRYPDMSESD 107

Query: 150 AXXXXXXXXXXXHDSGLDQAFIDALPVFIYKDLMGEKEPFDCAVCLCEF 4
           A           HDSGLDQAFIDALPVF YK+++G KEPFDCAVCLCEF
Sbjct: 108 AYQRQLQQLFHLHDSGLDQAFIDALPVFFYKEIIGLKEPFDCAVCLCEF 156


>ref|XP_002521028.1| ring finger protein, putative [Ricinus communis]
           gi|223539865|gb|EEF41445.1| ring finger protein,
           putative [Ricinus communis]
          Length = 374

 Score = 92.0 bits (227), Expect = 4e-17
 Identities = 57/113 (50%), Positives = 67/113 (59%), Gaps = 3/113 (2%)
 Frame = -1

Query: 330 QKDSSSTGNKISPXXXXXXXXXXXXXXXXXXIYFLYKVLKKSRSPS---LSQSTRNLDMS 160
           QK SSS GNKISP                  ++ L + L K RS S   +S+S R  +MS
Sbjct: 40  QKQSSS-GNKISPAILFIIVILAVIFFISGLLHLLVRFLIKHRSSSSSSVSESNRYPEMS 98

Query: 159 ISGAXXXXXXXXXXXHDSGLDQAFIDALPVFIYKDLMGEKEPFDCAVCLCEFS 1
            S A           HDSGLDQAFIDALPVF+YK++MG KEPFDCAVCLCE+S
Sbjct: 99  GSDAFQRQLQQLFHLHDSGLDQAFIDALPVFLYKEIMGLKEPFDCAVCLCEYS 151


>ref|XP_003519814.1| PREDICTED: RING-H2 finger protein ATL46-like [Glycine max]
          Length = 380

 Score = 90.9 bits (224), Expect = 1e-16
 Identities = 54/110 (49%), Positives = 63/110 (57%), Gaps = 4/110 (3%)
 Frame = -1

Query: 321 SSSTGNKISPXXXXXXXXXXXXXXXXXXIYFLYKVLKKSRSPS----LSQSTRNLDMSIS 154
           SSS+GN+ISP                  ++ L + L K RS S    + QS R  DMS S
Sbjct: 49  SSSSGNRISPAILFIIVILAVLFFILGLLHLLVRFLIKQRSSSNNSSIPQSNRYPDMSDS 108

Query: 153 GAXXXXXXXXXXXHDSGLDQAFIDALPVFIYKDLMGEKEPFDCAVCLCEF 4
            A           HDSGLDQAFIDALPVF YK+++G KEPFDCAVCLCEF
Sbjct: 109 DAYQRQLQQLFHLHDSGLDQAFIDALPVFFYKEIIGLKEPFDCAVCLCEF 158


>ref|XP_002265075.2| PREDICTED: RING-H2 finger protein ATL46-like [Vitis vinifera]
          Length = 393

 Score = 90.5 bits (223), Expect = 1e-16
 Identities = 53/108 (49%), Positives = 64/108 (59%), Gaps = 1/108 (0%)
 Frame = -1

Query: 321 SSSTGNKISPXXXXXXXXXXXXXXXXXXIYFLYKVLKKSRSPS-LSQSTRNLDMSISGAX 145
           S S+G++ISP                  ++ L + L K RS S +SQS R  + S S A 
Sbjct: 47  SPSSGSRISPAVLFIIVILAVIFFISGLLHLLVRFLVKHRSSSSISQSNRYQETSSSHAF 106

Query: 144 XXXXXXXXXXHDSGLDQAFIDALPVFIYKDLMGEKEPFDCAVCLCEFS 1
                     HDSGLDQAFIDALPVF+YKD++G KEPFDCAVCLCEFS
Sbjct: 107 QRQLQQLFHLHDSGLDQAFIDALPVFLYKDIVGLKEPFDCAVCLCEFS 154


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