BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00045641
         (393 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

pir||S65812 RNA-directed DNA polymerase (EC 2.7.7.49) (clone DW1...    65   6e-09
gb|AAC33961.1| contains similarity to reverse trancriptase (Pfam...    65   7e-09
emb|CAB40051.1| putative protein [Arabidopsis thaliana] gi|72677...    65   7e-09
gb|AAF97969.1|AC000103_19 F21J9.30 [Arabidopsis thaliana]              64   1e-08
gb|AAG03119.1|AC004133_13 F5A9.24 [Arabidopsis thaliana]               64   1e-08

>pir||S65812 RNA-directed DNA polymerase (EC 2.7.7.49) (clone DW15) -
           Arabidopsis thaliana retrotransposon Ta11-1
           gi|976278|gb|AAA75254.1| reverse transcriptase
           [Arabidopsis thaliana]
          Length = 1333

 Score = 65.1 bits (157), Expect = 6e-09
 Identities = 31/87 (35%), Positives = 51/87 (58%)
 Frame = -2

Query: 389 IVERLKNVRMTLIDWCKRHNFNSRVRIEVIQDKLQAAYESEYSERERVLSLEKEVDEAWA 210
           ++++LK+ R  L  W K +N NS  RI   +  L+    S +   + V SL+ ++ +A  
Sbjct: 273 VLDKLKHCRSALSRWKKENNINSSTRITQARAALELEQSSGFPRADLVFSLKNDLCKANH 332

Query: 209 EKEKYWCQKAKFKHLKEGDKNTKFFHA 129
           ++E +W QK++ K +  GDKNT FFHA
Sbjct: 333 DEEVFWSQKSRAKWMHSGDKNTSFFHA 359


>gb|AAC33961.1| contains similarity to reverse trancriptase (Pfam: rvt.hmm, score:
           42.57) [Arabidopsis thaliana]
          Length = 1662

 Score = 64.7 bits (156), Expect = 7e-09
 Identities = 30/86 (34%), Positives = 54/86 (62%), Gaps = 1/86 (1%)
 Frame = -2

Query: 383 ERLKNVRMTLIDWCKRHNFNSRVRIEVIQDKLQAAYES-EYSERERVLSLEKEVDEAWAE 207
           ++++  R  +     + N NSR+RI  +Q  L  A  S   +ER  +  +++E+  A+ +
Sbjct: 654 DQVRTCRQAMAKLKHKSNLNSRIRINQLQAALDKAMSSVNRTERRTISHIQRELTVAYRD 713

Query: 206 KEKYWCQKAKFKHLKEGDKNTKFFHA 129
           +E+YW QK++ + +KEGD+NT+FFHA
Sbjct: 714 EERYWQQKSRNQWMKEGDRNTEFFHA 739


>emb|CAB40051.1| putative protein [Arabidopsis thaliana] gi|7267781|emb|CAB81184.1|
           putative protein [Arabidopsis thaliana]
          Length = 1294

 Score = 64.7 bits (156), Expect = 7e-09
 Identities = 30/86 (34%), Positives = 54/86 (62%), Gaps = 1/86 (1%)
 Frame = -2

Query: 383 ERLKNVRMTLIDWCKRHNFNSRVRIEVIQDKLQAAYES-EYSERERVLSLEKEVDEAWAE 207
           ++++  R  +     + N NSR+RI  +Q  L  A  S   +ER  +  +++E+  A+ +
Sbjct: 634 DQVRTCRQAMAKLKHKSNLNSRIRINQLQAALDKAMSSVNRTERRTISHIQRELTVAYRD 693

Query: 206 KEKYWCQKAKFKHLKEGDKNTKFFHA 129
           +E+YW QK++ + +KEGD+NT+FFHA
Sbjct: 694 EERYWQQKSRNQWMKEGDRNTEFFHA 719


>gb|AAF97969.1|AC000103_19 F21J9.30 [Arabidopsis thaliana]
          Length = 1270

 Score = 64.3 bits (155), Expect = 1e-08
 Identities = 30/87 (34%), Positives = 55/87 (63%)
 Frame = -2

Query: 389 IVERLKNVRMTLIDWCKRHNFNSRVRIEVIQDKLQAAYESEYSERERVLSLEKEVDEAWA 210
           + +RL+  R +L  W K++N NS  +I  ++  L+      +   +RV  L+K++ +A+ 
Sbjct: 234 VADRLRACRKSLSSWKKQNNLNSLDKINQLEAALEKEQSLVWPIFQRVSVLKKDLAKAYR 293

Query: 209 EKEKYWCQKAKFKHLKEGDKNTKFFHA 129
           E+E YW QK++ K L+ G++N+K+FHA
Sbjct: 294 EEEAYWKQKSRQKWLRSGNRNSKYFHA 320


>gb|AAG03119.1|AC004133_13 F5A9.24 [Arabidopsis thaliana]
          Length = 1254

 Score = 64.3 bits (155), Expect = 1e-08
 Identities = 30/87 (34%), Positives = 55/87 (63%)
 Frame = -2

Query: 389 IVERLKNVRMTLIDWCKRHNFNSRVRIEVIQDKLQAAYESEYSERERVLSLEKEVDEAWA 210
           + +RL+  R +L  W K++N NS  +I  ++  L+      +   +RV  L+K++ +A+ 
Sbjct: 237 VADRLRACRKSLSSWKKQNNLNSLDKINQLEAALEKEQSLVWPIFQRVSVLKKDLAKAYR 296

Query: 209 EKEKYWCQKAKFKHLKEGDKNTKFFHA 129
           E+E YW QK++ K L+ G++N+K+FHA
Sbjct: 297 EEEAYWKQKSRQKWLRSGNRNSKYFHA 323