BLASTX nr result

ID: Lithospermum22_contig00045639 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00045639
         (426 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003553418.1| PREDICTED: putative pentatricopeptide repeat...   225   3e-57
ref|XP_002322703.1| predicted protein [Populus trichocarpa] gi|2...   223   2e-56
ref|XP_003625160.1| Pentatricopeptide repeat-containing protein ...   213   2e-53
ref|XP_004136748.1| PREDICTED: putative pentatricopeptide repeat...   211   4e-53
ref|XP_004165491.1| PREDICTED: LOW QUALITY PROTEIN: putative pen...   211   7e-53

>ref|XP_003553418.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At5g52630-like [Glycine max]
          Length = 582

 Score =  225 bits (574), Expect = 3e-57
 Identities = 104/141 (73%), Positives = 128/141 (90%)
 Frame = +2

Query: 2   HTKKVFELFKTMERSRMKPNFITFLCMLYACSHTGLVEEGKHYFGLMKQYGIEPGDQHYA 181
           HT + FELF+ MER  +KPNFITFLC+LYACSH GLVE+G+H FGLMK++GIEPG QHYA
Sbjct: 292 HTGRTFELFEEMERVGVKPNFITFLCLLYACSHAGLVEKGEHCFGLMKEHGIEPGSQHYA 351

Query: 182 SMVDLLGRAGKLQEALEVINEMPMPPTESVWGALLTGCRIHKDTDMASYVADRVFQLGAV 361
           ++VDLLGRAGKL+EA+ VI EMPM PTESVWGALLTGCRIH +T++AS+VAD+VF++GAV
Sbjct: 352 TLVDLLGRAGKLEEAVLVIKEMPMQPTESVWGALLTGCRIHGNTELASFVADKVFEMGAV 411

Query: 362 SSGLDVILANAYSAAGRYEEA 424
           SSG+ V+L+NAY+AAGR+EEA
Sbjct: 412 SSGIQVLLSNAYAAAGRWEEA 432


>ref|XP_002322703.1| predicted protein [Populus trichocarpa] gi|222867333|gb|EEF04464.1|
           predicted protein [Populus trichocarpa]
          Length = 627

 Score =  223 bits (567), Expect = 2e-56
 Identities = 105/141 (74%), Positives = 122/141 (86%)
 Frame = +2

Query: 2   HTKKVFELFKTMERSRMKPNFITFLCMLYACSHTGLVEEGKHYFGLMKQYGIEPGDQHYA 181
           HTK+ F+LF  ME + M+PNFITFLC+LYACSH GLVEEGK YF LMK+Y IEPG QHYA
Sbjct: 337 HTKEAFDLFTKMENAGMRPNFITFLCVLYACSHAGLVEEGKKYFALMKKYEIEPGTQHYA 396

Query: 182 SMVDLLGRAGKLQEALEVINEMPMPPTESVWGALLTGCRIHKDTDMASYVADRVFQLGAV 361
           SMVDLLGRAGKLQEAL VI  MP  PTESVWGA +TGCRIH +TD+A++ AD+VF+LGAV
Sbjct: 397 SMVDLLGRAGKLQEALSVIKGMPTEPTESVWGAFITGCRIHGNTDLAAFAADKVFELGAV 456

Query: 362 SSGLDVILANAYSAAGRYEEA 424
           SSGL V+L+NAY+AAGRYE+A
Sbjct: 457 SSGLHVMLSNAYAAAGRYEDA 477


>ref|XP_003625160.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
           gi|124360204|gb|ABN08217.1| Tetratricopeptide-like
           helical [Medicago truncatula]
           gi|355500175|gb|AES81378.1| Pentatricopeptide
           repeat-containing protein [Medicago truncatula]
          Length = 596

 Score =  213 bits (541), Expect = 2e-53
 Identities = 103/142 (72%), Positives = 122/142 (85%), Gaps = 1/142 (0%)
 Frame = +2

Query: 2   HTKKVFELFKTMER-SRMKPNFITFLCMLYACSHTGLVEEGKHYFGLMKQYGIEPGDQHY 178
           HT K FELF  M+    MK NFITFLC+LYACSH GLVE+GK+YF LMK YGIEPG QHY
Sbjct: 305 HTDKTFELFDKMKSVGGMKANFITFLCVLYACSHAGLVEKGKYYFELMKDYGIEPGTQHY 364

Query: 179 ASMVDLLGRAGKLQEALEVINEMPMPPTESVWGALLTGCRIHKDTDMASYVADRVFQLGA 358
           ++MVDLLGRAGKL +A+++I EMPM PTESVWGALLTGCR+H +T +ASYVADRV +LG+
Sbjct: 365 STMVDLLGRAGKLNDAVKLIEEMPMEPTESVWGALLTGCRLHGNTKLASYVADRVSELGS 424

Query: 359 VSSGLDVILANAYSAAGRYEEA 424
           VSSGL V+L+NAY+AAGR+EEA
Sbjct: 425 VSSGLHVMLSNAYAAAGRWEEA 446


>ref|XP_004136748.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At5g52630-like [Cucumis sativus]
          Length = 598

 Score =  211 bits (538), Expect = 4e-53
 Identities = 99/141 (70%), Positives = 121/141 (85%)
 Frame = +2

Query: 2   HTKKVFELFKTMERSRMKPNFITFLCMLYACSHTGLVEEGKHYFGLMKQYGIEPGDQHYA 181
           HT++VF LF+ M    MKPNFI+FL +LYACSH GLVE+G+ YF LM+ YGIEP  +HYA
Sbjct: 308 HTQRVFGLFEEMGNVGMKPNFISFLSVLYACSHAGLVEKGREYFSLMRDYGIEPETEHYA 367

Query: 182 SMVDLLGRAGKLQEALEVINEMPMPPTESVWGALLTGCRIHKDTDMASYVADRVFQLGAV 361
           S+VDLLGRAGKLQEA+ VI +MPM PTESVWGALLTGCRIHKDT+MA++VADR+ ++ + 
Sbjct: 368 SLVDLLGRAGKLQEAVSVIKQMPMRPTESVWGALLTGCRIHKDTEMAAFVADRILEMDSS 427

Query: 362 SSGLDVILANAYSAAGRYEEA 424
           SSGL V+L+NAY+AAGRYEEA
Sbjct: 428 SSGLHVLLSNAYAAAGRYEEA 448


>ref|XP_004165491.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
           repeat-containing protein At5g52630-like [Cucumis
           sativus]
          Length = 598

 Score =  211 bits (536), Expect = 7e-53
 Identities = 99/141 (70%), Positives = 120/141 (85%)
 Frame = +2

Query: 2   HTKKVFELFKTMERSRMKPNFITFLCMLYACSHTGLVEEGKHYFGLMKQYGIEPGDQHYA 181
           HT++VF LF+ M    MKPNFI FL +LYACSH GLVE+G+ YF LM+ YGIEP  +HYA
Sbjct: 308 HTQRVFGLFEEMGNVGMKPNFIXFLSVLYACSHAGLVEKGREYFSLMRDYGIEPETEHYA 367

Query: 182 SMVDLLGRAGKLQEALEVINEMPMPPTESVWGALLTGCRIHKDTDMASYVADRVFQLGAV 361
           S+VDLLGRAGKLQEA+ VI +MPM PTESVWGALLTGCRIHKDT+MA++VADR+ ++ + 
Sbjct: 368 SLVDLLGRAGKLQEAVSVIKQMPMRPTESVWGALLTGCRIHKDTEMAAFVADRILEMDSS 427

Query: 362 SSGLDVILANAYSAAGRYEEA 424
           SSGL V+L+NAY+AAGRYEEA
Sbjct: 428 SSGLHVLLSNAYAAAGRYEEA 448


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