BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00045632
         (302 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002869021.1| hypothetical protein ARALYDRAFT_490952 [Arab...    61   1e-09
ref|NP_195399.1| geranylgeranyl pyrophosphate synthase 11 [Arabi...    61   2e-09
gb|AAM65107.1| geranylgeranyl pyrophosphate synthase [Arabidopsi...    61   2e-09
ref|XP_003629488.1| Geranylgeranyl pyrophosphate synthase [Medic...    60   2e-08
gb|AAA32797.1| geranylgeranyl pyrophosphate synthase [Arabidopsi...    59   2e-08

>ref|XP_002869021.1| hypothetical protein ARALYDRAFT_490952 [Arabidopsis lyrata subsp.
           lyrata] gi|297314857|gb|EFH45280.1| hypothetical protein
           ARALYDRAFT_490952 [Arabidopsis lyrata subsp. lyrata]
          Length = 379

 Score = 61.2 bits (147), Expect(2) = 1e-09
 Identities = 31/55 (56%), Positives = 39/55 (70%), Gaps = 3/55 (5%)
 Frame = +3

Query: 6   QNEEKALDEEAMLREPLKMHESMRYSLLGGGKSLRPIGCL*A---VGRQESVVMP 161
           ++  KALD    LREPLK+HE+MRYSLL GGK +RP+ C+ A   VG +ES  MP
Sbjct: 93  ESVNKALDSAVPLREPLKIHEAMRYSLLAGGKRVRPVLCIAACELVGGEESTAMP 147



 Score = 26.2 bits (56), Expect(2) = 1e-09
 Identities = 16/35 (45%), Positives = 19/35 (54%), Gaps = 4/35 (11%)
 Frame = +1

Query: 172 KLFGEDSAVLAGTS----AGEKSVDKDSGKVTSPI 264
           K+FGED AVLAG +    A E      S  V SP+
Sbjct: 182 KVFGEDVAVLAGDALLSFAFEHLASATSSDVVSPV 216


>ref|NP_195399.1| geranylgeranyl pyrophosphate synthase 11 [Arabidopsis thaliana]
           gi|13432144|sp|P34802.2|GGPP1_ARATH RecName:
           Full=Heterodimeric geranylgeranyl pyrophosphate synthase
           large subunit 1, chloroplastic; Short=GGPP synthase 1;
           Short=GGPS1; AltName: Full=(2E,6E)-farnesyl diphosphate
           synthase 1; AltName: Full=Dimethylallyltranstransferase
           1; AltName: Full=Farnesyl diphosphate synthase 1;
           AltName: Full=Farnesyltranstransferase 1; AltName:
           Full=Geranyltranstransferase 1; Flags: Precursor
           gi|2464899|emb|CAB16803.1| geranylgeranyl pyrophosphate
           synthase [Arabidopsis thaliana]
           gi|7270630|emb|CAB80347.1| geranylgeranyl pyrophosphate
           synthase [Arabidopsis thaliana]
           gi|110742524|dbj|BAE99179.1| geranylgeranyl
           pyrophosphate synthase [Arabidopsis thaliana]
           gi|332661305|gb|AEE86705.1| geranylgeranyl pyrophosphate
           synthase 11 [Arabidopsis thaliana]
          Length = 371

 Score = 60.8 bits (146), Expect(2) = 2e-09
 Identities = 31/51 (60%), Positives = 37/51 (72%), Gaps = 3/51 (5%)
 Frame = +3

Query: 18  KALDEEAMLREPLKMHESMRYSLLGGGKSLRPIGCL*A---VGRQESVVMP 161
           KALD    LREPLK+HE+MRYSLL GGK +RP+ C+ A   VG +ES  MP
Sbjct: 89  KALDSAVPLREPLKIHEAMRYSLLAGGKRVRPVLCIAACELVGGEESTAMP 139



 Score = 26.2 bits (56), Expect(2) = 2e-09
 Identities = 16/35 (45%), Positives = 19/35 (54%), Gaps = 4/35 (11%)
 Frame = +1

Query: 172 KLFGEDSAVLAGTS----AGEKSVDKDSGKVTSPI 264
           K+FGED AVLAG +    A E      S  V SP+
Sbjct: 174 KVFGEDVAVLAGDALLSFAFEHLASATSSDVVSPV 208


>gb|AAM65107.1| geranylgeranyl pyrophosphate synthase [Arabidopsis thaliana]
          Length = 371

 Score = 60.8 bits (146), Expect(2) = 2e-09
 Identities = 31/51 (60%), Positives = 37/51 (72%), Gaps = 3/51 (5%)
 Frame = +3

Query: 18  KALDEEAMLREPLKMHESMRYSLLGGGKSLRPIGCL*A---VGRQESVVMP 161
           KALD    LREPLK+HE+MRYSLL GGK +RP+ C+ A   VG +ES  MP
Sbjct: 89  KALDSAVPLREPLKIHEAMRYSLLAGGKRVRPVLCIAACELVGGEESTAMP 139



 Score = 26.2 bits (56), Expect(2) = 2e-09
 Identities = 16/35 (45%), Positives = 19/35 (54%), Gaps = 4/35 (11%)
 Frame = +1

Query: 172 KLFGEDSAVLAGTS----AGEKSVDKDSGKVTSPI 264
           K+FGED AVLAG +    A E      S  V SP+
Sbjct: 174 KVFGEDVAVLAGDALLSFAFEHLASATSSDVVSPV 208


>ref|XP_003629488.1| Geranylgeranyl pyrophosphate synthase [Medicago truncatula]
           gi|295322741|gb|ADG01842.1| geranylgeranyl-diphosphate
           synthase [Medicago truncatula]
           gi|355523510|gb|AET03964.1| Geranylgeranyl pyrophosphate
           synthase [Medicago truncatula]
          Length = 372

 Score = 60.1 bits (144), Expect(2) = 2e-08
 Identities = 31/51 (60%), Positives = 37/51 (72%), Gaps = 3/51 (5%)
 Frame = +3

Query: 18  KALDEEAMLREPLKMHESMRYSLLGGGKSLRPIGCL*A---VGRQESVVMP 161
           KALD+   LREPLK+HE+MRYSLL GGK +RP+ CL A   VG  E + MP
Sbjct: 94  KALDDAVSLREPLKVHEAMRYSLLAGGKRVRPVLCLAACELVGGTEPMAMP 144



 Score = 23.5 bits (49), Expect(2) = 2e-08
 Identities = 10/12 (83%), Positives = 11/12 (91%)
 Frame = +1

Query: 172 KLFGEDSAVLAG 207
           K+FGED AVLAG
Sbjct: 179 KVFGEDVAVLAG 190


>gb|AAA32797.1| geranylgeranyl pyrophosphate synthase [Arabidopsis thaliana]
          Length = 371

 Score = 58.5 bits (140), Expect(2) = 2e-08
 Identities = 30/51 (58%), Positives = 36/51 (70%), Gaps = 3/51 (5%)
 Frame = +3

Query: 18  KALDEEAMLREPLKMHESMRYSLLGGGKSLRPIGCL*A---VGRQESVVMP 161
           KALD    LREPLK+HE+M YSLL GGK +RP+ C+ A   VG +ES  MP
Sbjct: 89  KALDSAVPLREPLKIHEAMSYSLLAGGKRVRPVLCIAACELVGGEESTAMP 139



 Score = 25.0 bits (53), Expect(2) = 2e-08
 Identities = 15/35 (42%), Positives = 19/35 (54%), Gaps = 4/35 (11%)
 Frame = +1

Query: 172 KLFGEDSAVLAGTS----AGEKSVDKDSGKVTSPI 264
           K+FGED AVLAG +    + E      S  V SP+
Sbjct: 174 KVFGEDVAVLAGDALLSFSFEHLASATSSDVVSPV 208