BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00045622
         (495 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_178356.1| RNA-directed DNA polymerase (reverse transcript...    85   5e-15
gb|AAD32866.1|AC005489_4 F14N23.4 [Arabidopsis thaliana]               78   9e-13
gb|ABD96948.1| hypothetical protein [Cleome spinosa]                   75   7e-12
ref|XP_003544295.1| PREDICTED: zinc finger CCCH domain-containin...    74   9e-12
ref|NP_567266.1| RNA-directed DNA polymerase (reverse transcript...    74   2e-11

>ref|NP_178356.1| RNA-directed DNA polymerase (reverse transcriptase)-related family
           protein [Arabidopsis thaliana] gi|3184287|gb|AAC18934.1|
           putative non-LTR retroelement reverse transcriptase
           [Arabidopsis thaliana] gi|330250497|gb|AEC05591.1|
           RNA-directed DNA polymerase (reverse
           transcriptase)-related family protein [Arabidopsis
           thaliana]
          Length = 211

 Score = 85.1 bits (209), Expect = 5e-15
 Identities = 45/102 (44%), Positives = 56/102 (54%), Gaps = 1/102 (0%)
 Frame = +3

Query: 183 WNELRIISTHI**WKVIWFKGHVPKFSFICWTLFLRRLPTKDRLMK*GLIQDDTCLFCDE 362
           W  L  I   +  +K IWFKG +PK +FI W     RL TKDR++  G I    CLFC+ 
Sbjct: 31  WLHLNPIGERVDWFKAIWFKGKIPKHAFIAWVNMRHRLHTKDRMISWGFIFPPLCLFCNT 90

Query: 363 H-ETLQYLFFKCNVAAEVWRKLLMYPHEYHQLQGWEDEVRWL 485
           H ET Q+LFF C  A EVW       H +  L  +ED +RWL
Sbjct: 91  HDETRQHLFFDCEFAREVWIYFTSRVHVFPPLL-FEDGIRWL 131


>gb|AAD32866.1|AC005489_4 F14N23.4 [Arabidopsis thaliana]
          Length = 1161

 Score = 77.8 bits (190), Expect = 9e-13
 Identities = 36/88 (40%), Positives = 54/88 (61%), Gaps = 1/88 (1%)
 Frame = +3

Query: 156  SNSCTIVNVWNELRIISTHI**WKVIWFKGHVPKFSFICWTLFLRRLPTKDRLMK*GLIQ 335
            SN  +  + W+ L+  ST +   K +WFK HVPK +FICW +   RL T+DRL + G   
Sbjct: 965  SNRFSTADTWSYLQPSSTSVLWHKAVWFKDHVPKQAFICWVVAHNRLHTRDRLRRWGFSI 1024

Query: 336  DDTCLFC-DEHETLQYLFFKCNVAAEVW 416
              TC+ C D  E+ ++LFF+C  ++E+W
Sbjct: 1025 PPTCVLCNDLDESREHLFFRCQFSSEIW 1052


>gb|ABD96948.1| hypothetical protein [Cleome spinosa]
          Length = 539

 Score = 74.7 bits (182), Expect = 7e-12
 Identities = 41/108 (37%), Positives = 60/108 (55%), Gaps = 1/108 (0%)
 Frame = +3

Query: 99  ESAFFKYFEDNDDQLEWFGSNSCTIVNVWNELRIISTHI**WKVIWFKGHVPKFSFICWT 278
           +SA +KY E+  D   +F S+       WN  R +        ++WF   +P+ +F+ W 
Sbjct: 395 DSALWKYKEE--DFRPYFSSS-----RTWNLTRTVHVIAPWSSIVWFPLAIPRHAFLHWQ 447

Query: 279 LFLRRLPTKDRLMK*GLIQDDTCLFCD-EHETLQYLFFKCNVAAEVWR 419
           + L RLPTKDRL + G+  D TC  CD E E+ Q+LFF C  A+ +WR
Sbjct: 448 VMLFRLPTKDRLQQWGITSDATCRLCDGEDESHQHLFFGCTYASHLWR 495


>ref|XP_003544295.1| PREDICTED: zinc finger CCCH domain-containing protein 66-like
           [Glycine max]
          Length = 1089

 Score = 74.3 bits (181), Expect = 9e-12
 Identities = 32/89 (35%), Positives = 52/89 (58%), Gaps = 1/89 (1%)
 Frame = +3

Query: 222 WKVIWFKGHV-PKFSFICWTLFLRRLPTKDRLMK*GLIQDDTCLFCDEHETLQYLFFKCN 398
           W+ ++F     P+  FI W     RL TK+RL + G++ D  C FC+E ET+Q+L F+C 
Sbjct: 251 WRKVFFNNEARPRALFILWLACHNRLATKERLYRFGIVNDARCAFCEEVETVQHLLFECG 310

Query: 399 VAAEVWRKLLMYPHEYHQLQGWEDEVRWL 485
               +W+K+L + +  H+  GW  E+ W+
Sbjct: 311 EMYAIWKKVLDWLNVDHEPAGWLQELDWI 339


>ref|NP_567266.1| RNA-directed DNA polymerase (reverse transcriptase)-related family
           protein [Arabidopsis thaliana]
           gi|5732057|gb|AAD48956.1|AF149414_5 contains similarity
           to a family of Arabidopsis thaliana predicted proteins,
           which have similarity to reverse transcriptases; see
           T14P8.10 (GB:AF069298) [Arabidopsis thaliana]
           gi|7267223|emb|CAB80830.1| AT4g04650 [Arabidopsis
           thaliana] gi|332657009|gb|AEE82409.1| RNA-directed DNA
           polymerase (reverse transcriptase)-related family
           protein [Arabidopsis thaliana]
          Length = 332

 Score = 73.6 bits (179), Expect = 2e-11
 Identities = 39/103 (37%), Positives = 53/103 (51%), Gaps = 6/103 (5%)
 Frame = +3

Query: 129 NDDQLEW-----FGSNSCTIVNVWNELRIISTHI**WKVIWFKGHVPKFSFICWTLFLRR 293
           +DD   W       SN  +    W+ L   S  +   K +WFK HVPK +FICW +   R
Sbjct: 94  HDDSFLWKTDLHAPSNRFSAPRTWSALHPQSHTVPWHKAVWFKNHVPKHAFICWVVAWNR 153

Query: 294 LPTKDRLMK*GLIQDDTCLFCDEH-ETLQYLFFKCNVAAEVWR 419
           L T+DRL   GL     CL C+ H ++  +LFF+C  +  VWR
Sbjct: 154 LHTRDRLQNWGLSIPAECLLCNAHDDSRAHLFFECQFSGVVWR 196