BLASTX nr result

ID: Lithospermum22_contig00045620 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00045620
         (354 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004141898.1| PREDICTED: microtubule-associated protein RP...   222   2e-56
ref|XP_002307285.1| predicted protein [Populus trichocarpa] gi|2...   222   2e-56
ref|XP_002310118.1| predicted protein [Populus trichocarpa] gi|2...   222   2e-56
ref|XP_002865013.1| ATEB1C [Arabidopsis lyrata subsp. lyrata] gi...   221   5e-56
ref|NP_201528.1| end binding protein 1C [Arabidopsis thaliana] g...   221   5e-56

>ref|XP_004141898.1| PREDICTED: microtubule-associated protein RP/EB family member
           1C-like [Cucumis sativus]
           gi|449485429|ref|XP_004157165.1| PREDICTED:
           microtubule-associated protein RP/EB family member
           1C-like [Cucumis sativus]
          Length = 329

 Score =  222 bits (566), Expect = 2e-56
 Identities = 105/116 (90%), Positives = 112/116 (96%)
 Frame = +2

Query: 5   NIGIMDSAYFVGRSEILAWINSTLRLSLSKVEESCTGAVQCQLMDAVHPGMVPMHKVNFD 184
           NIG+MDSAYFVGRSEILAWINSTL L+LSKVEE+C+GAV CQLMDA HPGMVPMHKVNFD
Sbjct: 4   NIGMMDSAYFVGRSEILAWINSTLHLNLSKVEEACSGAVHCQLMDAAHPGMVPMHKVNFD 63

Query: 185 AKSEYDMIQNYKVLQDVFNKLKITKHIEVAKLVKGRPLDNLEFMQWMKRYCDSVSG 352
           AKSEY+MIQNYKVLQDVFNKLKITKHIEV+KLVKGRPLDNLEFMQWMKRYCDS +G
Sbjct: 64  AKSEYEMIQNYKVLQDVFNKLKITKHIEVSKLVKGRPLDNLEFMQWMKRYCDSANG 119


>ref|XP_002307285.1| predicted protein [Populus trichocarpa] gi|222856734|gb|EEE94281.1|
           predicted protein [Populus trichocarpa]
          Length = 253

 Score =  222 bits (566), Expect = 2e-56
 Identities = 104/117 (88%), Positives = 115/117 (98%)
 Frame = +2

Query: 2   ANIGIMDSAYFVGRSEILAWINSTLRLSLSKVEESCTGAVQCQLMDAVHPGMVPMHKVNF 181
           +NIG+MDSAYFVGRSEIL WINSTL+L+LSKVEE+C+GAV CQLMD+VHPGMVPMHKVNF
Sbjct: 3   SNIGMMDSAYFVGRSEILCWINSTLQLNLSKVEEACSGAVHCQLMDSVHPGMVPMHKVNF 62

Query: 182 DAKSEYDMIQNYKVLQDVFNKLKITKHIEVAKLVKGRPLDNLEFMQWMKRYCDSVSG 352
           DAK+EY+MIQNYKVLQDVFNKLKITKHIEV+KLVKGRPLDNLEFMQWMKRYCDSV+G
Sbjct: 63  DAKNEYEMIQNYKVLQDVFNKLKITKHIEVSKLVKGRPLDNLEFMQWMKRYCDSVNG 119


>ref|XP_002310118.1| predicted protein [Populus trichocarpa] gi|222853021|gb|EEE90568.1|
           predicted protein [Populus trichocarpa]
          Length = 249

 Score =  222 bits (566), Expect = 2e-56
 Identities = 104/116 (89%), Positives = 115/116 (99%)
 Frame = +2

Query: 5   NIGIMDSAYFVGRSEILAWINSTLRLSLSKVEESCTGAVQCQLMDAVHPGMVPMHKVNFD 184
           NIG+MDSAYFVGRSEIL+WINSTL+L+LSKVEE+C+GAV CQLMD+VHPGMVPMHKVNFD
Sbjct: 3   NIGMMDSAYFVGRSEILSWINSTLQLNLSKVEEACSGAVHCQLMDSVHPGMVPMHKVNFD 62

Query: 185 AKSEYDMIQNYKVLQDVFNKLKITKHIEVAKLVKGRPLDNLEFMQWMKRYCDSVSG 352
           AK+EY+MIQNYKVLQDVFNKLKITKHIEV+KLVKGRPLDNLEFMQWMKRYCDSV+G
Sbjct: 63  AKNEYEMIQNYKVLQDVFNKLKITKHIEVSKLVKGRPLDNLEFMQWMKRYCDSVNG 118


>ref|XP_002865013.1| ATEB1C [Arabidopsis lyrata subsp. lyrata]
           gi|297310848|gb|EFH41272.1| ATEB1C [Arabidopsis lyrata
           subsp. lyrata]
          Length = 325

 Score =  221 bits (563), Expect = 5e-56
 Identities = 104/116 (89%), Positives = 114/116 (98%)
 Frame = +2

Query: 5   NIGIMDSAYFVGRSEILAWINSTLRLSLSKVEESCTGAVQCQLMDAVHPGMVPMHKVNFD 184
           NIG+MDSAYFVGRSEILAWINSTL+L+LSKVEE+C+GAV CQLMD+VHPG VPMHKVNFD
Sbjct: 4   NIGMMDSAYFVGRSEILAWINSTLQLNLSKVEEACSGAVHCQLMDSVHPGTVPMHKVNFD 63

Query: 185 AKSEYDMIQNYKVLQDVFNKLKITKHIEVAKLVKGRPLDNLEFMQWMKRYCDSVSG 352
           AKSEY+MIQNYKVLQDVFNKLKITKHIEV+KLVKGRPLDNLEFMQWMK+YCDSV+G
Sbjct: 64  AKSEYEMIQNYKVLQDVFNKLKITKHIEVSKLVKGRPLDNLEFMQWMKKYCDSVNG 119


>ref|NP_201528.1| end binding protein 1C [Arabidopsis thaliana]
           gi|75262450|sp|Q9FGQ6.1|EB1C_ARATH RecName:
           Full=Microtubule-associated protein RP/EB family member
           1C; AltName: Full=APC-binding protein EB1C; AltName:
           Full=End-binding protein 1C; Short=AtEB1C; AltName:
           Full=Protein ATEB1 homolog 1; Short=AtEB1H1
           gi|9759276|dbj|BAB09646.1| unnamed protein product
           [Arabidopsis thaliana] gi|21593362|gb|AAM65311.1|
           microtubule-associated protein EB1-like protein
           [Arabidopsis thaliana] gi|51969132|dbj|BAD43258.1|
           unknown protein [Arabidopsis thaliana]
           gi|114050655|gb|ABI49477.1| At5g67270 [Arabidopsis
           thaliana] gi|332010940|gb|AED98323.1| end binding
           protein 1C [Arabidopsis thaliana]
          Length = 329

 Score =  221 bits (563), Expect = 5e-56
 Identities = 104/116 (89%), Positives = 114/116 (98%)
 Frame = +2

Query: 5   NIGIMDSAYFVGRSEILAWINSTLRLSLSKVEESCTGAVQCQLMDAVHPGMVPMHKVNFD 184
           NIG+MDSAYFVGRSEILAWINSTL+L+LSKVEE+C+GAV CQLMD+VHPG VPMHKVNFD
Sbjct: 4   NIGMMDSAYFVGRSEILAWINSTLQLNLSKVEEACSGAVHCQLMDSVHPGTVPMHKVNFD 63

Query: 185 AKSEYDMIQNYKVLQDVFNKLKITKHIEVAKLVKGRPLDNLEFMQWMKRYCDSVSG 352
           AKSEY+MIQNYKVLQDVFNKLKITKHIEV+KLVKGRPLDNLEFMQWMK+YCDSV+G
Sbjct: 64  AKSEYEMIQNYKVLQDVFNKLKITKHIEVSKLVKGRPLDNLEFMQWMKKYCDSVNG 119


Top