BLASTX nr result

ID: Lithospermum22_contig00045609 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00045609
         (317 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN71438.1| hypothetical protein VITISV_011330 [Vitis vinifera]    76   6e-17
emb|CCA66040.1| hypothetical protein [Beta vulgaris subsp. vulga...    80   1e-15
dbj|BAB01814.1| unnamed protein product [Arabidopsis thaliana]         85   5e-15
gb|AFP55557.1| non-ltr retroelement reverse transcriptase [Rosa ...    73   2e-14
dbj|BAM28750.1| reverse transcriptase-like protein, partial [Cam...    72   4e-14

>emb|CAN71438.1| hypothetical protein VITISV_011330 [Vitis vinifera]
          Length = 1484

 Score = 76.3 bits (186), Expect(3) = 6e-17
 Identities = 34/65 (52%), Positives = 45/65 (69%)
 Frame = -2

Query: 316 HWKAWDKLCDDKFQGGLGFKDLECMNLAMLAKQGWRIATHKASLLYKLLKGRYFRRPSFI 137
           +W +WDKLC  K +GGLGF++    NLAML KQGW + T   SL+ +LLK RY+R   F+
Sbjct: 358 NWLSWDKLCLRKEEGGLGFRNXRDFNLAMLGKQGWNLITKPDSLIARLLKARYYRSGDFL 417

Query: 136 HAKLG 122
            A+LG
Sbjct: 418 SARLG 422



 Score = 30.8 bits (68), Expect(3) = 6e-17
 Identities = 12/28 (42%), Positives = 19/28 (67%)
 Frame = -1

Query: 131 KIGGNPSFGRRILLEGRKVLLKGLRWQV 48
           ++G NPSF  + +   R +LLKG RW++
Sbjct: 420 RLGHNPSFTWKGIWSSRAILLKGSRWRI 447



 Score = 24.6 bits (52), Expect(3) = 6e-17
 Identities = 8/14 (57%), Positives = 10/14 (71%)
 Frame = -3

Query: 48  GDRRSIDMWTEPWV 7
           GD  SID+W  PW+
Sbjct: 448 GDGCSIDVWNNPWL 461


>emb|CCA66040.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
          Length = 1362

 Score = 80.5 bits (197), Expect(2) = 1e-15
 Identities = 33/65 (50%), Positives = 44/65 (67%)
 Frame = -2

Query: 316  HWKAWDKLCDDKFQGGLGFKDLECMNLAMLAKQGWRIATHKASLLYKLLKGRYFRRPSFI 137
            HW +WD LC  K  GGLGF+DL C N ++LAKQ WR+ T   +LLY+LL+ RYF+    +
Sbjct: 840  HWHSWDTLCYPKSMGGLGFRDLHCFNQSLLAKQAWRLCTGDQTLLYRLLQARYFKSSELL 899

Query: 136  HAKLG 122
             A+ G
Sbjct: 900  EARRG 904



 Score = 27.3 bits (59), Expect(2) = 1e-15
 Identities = 13/32 (40%), Positives = 19/32 (59%)
 Frame = -1

Query: 143 LYPCKIGGNPSFGRRILLEGRKVLLKGLRWQV 48
           L   + G NPSF  R +   + +LL+GL+W V
Sbjct: 898 LLEARRGYNPSFTWRSIWGSKSLLLEGLKWCV 929


>dbj|BAB01814.1| unnamed protein product [Arabidopsis thaliana]
          Length = 170

 Score = 85.1 bits (209), Expect = 5e-15
 Identities = 36/79 (45%), Positives = 55/79 (69%)
 Frame = -2

Query: 316 HWKAWDKLCDDKFQGGLGFKDLECMNLAMLAKQGWRIATHKASLLYKLLKGRYFRRPSFI 137
           HW AWDK+C  K +GGLGF+ ++  N A+LAKQ WR+ T   SL  ++ KGRYFR+ + +
Sbjct: 91  HWMAWDKVCYSKSEGGLGFRSVDNFNSALLAKQLWRLITVPNSLFARVFKGRYFRKSNPL 150

Query: 136 HAKLGAIHPLDGAFFLRVE 80
           +  +  +HP+DG  F++V+
Sbjct: 151 NNIIHTLHPIDGEIFVQVD 169


>gb|AFP55557.1| non-ltr retroelement reverse transcriptase [Rosa rugosa]
          Length = 1747

 Score = 73.2 bits (178), Expect(2) = 2e-14
 Identities = 31/66 (46%), Positives = 43/66 (65%)
 Frame = -2

Query: 316  HWKAWDKLCDDKFQGGLGFKDLECMNLAMLAKQGWRIATHKASLLYKLLKGRYFRRPSFI 137
            HW+ W  LC  K  GGLGF+DL   N A+L KQGWR+  +  SL+ ++LK +YF    F+
Sbjct: 1124 HWRRWSDLCFSKKDGGLGFRDLSLFNQALLGKQGWRLMMYPDSLVARMLKAKYFPWDDFM 1183

Query: 136  HAKLGA 119
             A+LG+
Sbjct: 1184 EAELGS 1189



 Score = 30.8 bits (68), Expect(2) = 2e-14
 Identities = 12/28 (42%), Positives = 21/28 (75%)
 Frame = -1

Query: 131  KIGGNPSFGRRILLEGRKVLLKGLRWQV 48
            ++G +PS+  R  L GR++L KG+RW++
Sbjct: 1186 ELGSSPSYLWRSFLWGRELLRKGVRWRI 1213


>dbj|BAM28750.1| reverse transcriptase-like protein, partial [Camellia sinensis var.
           sinensis]
          Length = 255

 Score = 71.6 bits (174), Expect(2) = 4e-14
 Identities = 30/66 (45%), Positives = 44/66 (66%)
 Frame = -2

Query: 316 HWKAWDKLCDDKFQGGLGFKDLECMNLAMLAKQGWRIATHKASLLYKLLKGRYFRRPSFI 137
           HW +W +LC  K QGG+GF+ L+  N A+LAKQ WR+     SL+ ++ K RYF + SF+
Sbjct: 86  HWTSWKQLCKSKLQGGMGFRCLQXFNSALLAKQCWRLVQRPQSLVARVFKARYFPQTSFL 145

Query: 136 HAKLGA 119
            A +G+
Sbjct: 146 DALVGS 151



 Score = 30.8 bits (68), Expect(2) = 4e-14
 Identities = 13/27 (48%), Positives = 18/27 (66%)
 Frame = -1

Query: 128 IGGNPSFGRRILLEGRKVLLKGLRWQV 48
           +G NPSF  R ++  R +L  GLRW+V
Sbjct: 149 VGSNPSFTWRSIVGSRSLLNAGLRWRV 175


Top