BLASTX nr result

ID: Lithospermum22_contig00045592 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00045592
         (295 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABD96948.1| hypothetical protein [Cleome spinosa]                   47   6e-07

>gb|ABD96948.1| hypothetical protein [Cleome spinosa]
          Length = 539

 Score = 47.0 bits (110), Expect(2) = 6e-07
 Identities = 26/65 (40%), Positives = 39/65 (60%)
 Frame = +3

Query: 93  KILGVSLSSRSLTSEDYGALISKIYGKING**SRHLSLGGRAELIRSSIFGV*NF*CINL 272
           + LGVSLS   LT  DY  L+ ++  KIN   +R+LS  GR +L+ + I+G+ N   +  
Sbjct: 217 RYLGVSLSPVRLTKSDYQPLLDRVKAKINSWTTRYLSYAGRLQLVGTVIYGMVNAWGMIF 276

Query: 273 PLPKY 287
            LPK+
Sbjct: 277 MLPKF 281



 Score = 31.2 bits (69), Expect(2) = 6e-07
 Identities = 14/34 (41%), Positives = 19/34 (55%)
 Frame = +1

Query: 4   KSRIYFGSTPGFVRA*LCEFIGMSEGVLPIRYLG 105
           K+ I+     G   + LC  IG + G LP+RYLG
Sbjct: 187 KTEIFLRGLNGTEASTLCAVIGFTRGYLPVRYLG 220


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