BLASTX nr result

ID: Lithospermum22_contig00045582 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00045582
         (271 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003552856.1| PREDICTED: rop guanine nucleotide exchange f...    94   1e-17
ref|XP_003538433.1| PREDICTED: rop guanine nucleotide exchange f...    93   3e-17
ref|XP_002524258.1| Rop guanine nucleotide exchange factor, puta...    87   1e-15
ref|XP_002277071.2| PREDICTED: rop guanine nucleotide exchange f...    86   3e-15
emb|CBI31584.3| unnamed protein product [Vitis vinifera]               86   3e-15

>ref|XP_003552856.1| PREDICTED: rop guanine nucleotide exchange factor 1-like [Glycine
           max]
          Length = 593

 Score = 94.0 bits (232), Expect = 1e-17
 Identities = 50/80 (62%), Positives = 60/80 (75%), Gaps = 1/80 (1%)
 Frame = +2

Query: 35  SPSSLGWPIKNSLVTKRFKI-ESENKHHLKVEDDGIKFRKQSSKLSEMEMMKERFGKLLL 211
           SP+ LGWPI  + ++KR    E ENKH   +ED   KF   + KLSE++MMKERF KLLL
Sbjct: 52  SPAPLGWPILKATISKRSNSDEKENKHKSHLEDK--KFTSIALKLSEVDMMKERFAKLLL 109

Query: 212 GEDMSGNGKGVCTAVAISNA 271
           GEDMSG+GKGVCTA+AISNA
Sbjct: 110 GEDMSGSGKGVCTALAISNA 129


>ref|XP_003538433.1| PREDICTED: rop guanine nucleotide exchange factor 1-like [Glycine
           max]
          Length = 598

 Score = 92.8 bits (229), Expect = 3e-17
 Identities = 49/80 (61%), Positives = 59/80 (73%), Gaps = 1/80 (1%)
 Frame = +2

Query: 35  SPSSLGWPIKNSLVTKRFKI-ESENKHHLKVEDDGIKFRKQSSKLSEMEMMKERFGKLLL 211
           SP+ LGWPI  + ++KR    E EN+H   +ED   KF     KLSE++MMKERF KLLL
Sbjct: 54  SPAPLGWPILKATISKRSSSDEKENRHKSHLEDK--KFTSIGLKLSELDMMKERFAKLLL 111

Query: 212 GEDMSGNGKGVCTAVAISNA 271
           GEDMSG+GKGVCTA+AISNA
Sbjct: 112 GEDMSGSGKGVCTALAISNA 131


>ref|XP_002524258.1| Rop guanine nucleotide exchange factor, putative [Ricinus communis]
           gi|223536535|gb|EEF38182.1| Rop guanine nucleotide
           exchange factor, putative [Ricinus communis]
          Length = 590

 Score = 87.0 bits (214), Expect = 1e-15
 Identities = 47/82 (57%), Positives = 61/82 (74%), Gaps = 3/82 (3%)
 Frame = +2

Query: 35  SPSSLGWPIKNSLVTKRFKIES---ENKHHLKVEDDGIKFRKQSSKLSEMEMMKERFGKL 205
           S S LGWPI+ +   K+  + S   ENK    ++D   KF++ S+K+SE++MMKERF KL
Sbjct: 69  SQSPLGWPIRKAGECKKSLLGSTGNENKDSTHLDDS--KFKQLSTKISEIDMMKERFAKL 126

Query: 206 LLGEDMSGNGKGVCTAVAISNA 271
           LLGEDMSG+GKGVCTA+AISNA
Sbjct: 127 LLGEDMSGSGKGVCTALAISNA 148


>ref|XP_002277071.2| PREDICTED: rop guanine nucleotide exchange factor 1 [Vitis
           vinifera]
          Length = 571

 Score = 85.9 bits (211), Expect = 3e-15
 Identities = 48/82 (58%), Positives = 58/82 (70%), Gaps = 3/82 (3%)
 Frame = +2

Query: 35  SPSSLGWPIKNSLVTKRFKI---ESENKHHLKVEDDGIKFRKQSSKLSEMEMMKERFGKL 205
           SP+ LGWPI+ + V K       E E K HL    +  K ++  SK+SE+EMMKERF KL
Sbjct: 56  SPTLLGWPIRKAEVRKSSVSDVSEDETKSHL----NDSKVKQLGSKVSEIEMMKERFSKL 111

Query: 206 LLGEDMSGNGKGVCTAVAISNA 271
           LLGEDMSG+GKGVCTA+AISNA
Sbjct: 112 LLGEDMSGSGKGVCTALAISNA 133


>emb|CBI31584.3| unnamed protein product [Vitis vinifera]
          Length = 814

 Score = 85.9 bits (211), Expect = 3e-15
 Identities = 48/82 (58%), Positives = 58/82 (70%), Gaps = 3/82 (3%)
 Frame = +2

Query: 35  SPSSLGWPIKNSLVTKRFKI---ESENKHHLKVEDDGIKFRKQSSKLSEMEMMKERFGKL 205
           SP+ LGWPI+ + V K       E E K HL    +  K ++  SK+SE+EMMKERF KL
Sbjct: 56  SPTLLGWPIRKAEVRKSSVSDVSEDETKSHL----NDSKVKQLGSKVSEIEMMKERFSKL 111

Query: 206 LLGEDMSGNGKGVCTAVAISNA 271
           LLGEDMSG+GKGVCTA+AISNA
Sbjct: 112 LLGEDMSGSGKGVCTALAISNA 133


Top