BLASTX nr result

ID: Lithospermum22_contig00045570 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00045570
         (351 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN76379.1| hypothetical protein VITISV_017862 [Vitis vinifera]    86   2e-28
emb|CBI37296.3| unnamed protein product [Vitis vinifera]               77   2e-25
gb|AAG51247.1|AC055769_6 copia-type polyprotein, putative; 28768...    87   6e-25
dbj|BAB11200.1| copia-type polyprotein [Arabidopsis thaliana] gi...    87   6e-25
gb|AAF25964.2|AC017118_1 F6N18.1 [Arabidopsis thaliana]                87   6e-25

>emb|CAN76379.1| hypothetical protein VITISV_017862 [Vitis vinifera]
          Length = 639

 Score = 86.3 bits (212), Expect(2) = 2e-28
 Identities = 43/70 (61%), Positives = 50/70 (71%)
 Frame = +1

Query: 1   LSFINDYSRKCWIYLLVNKFDAFDHFKYFKSMVETEIDVKIKCLRTDRGGEFNSANFDEF 180
           +SFI+D+SRK WIYLLV K  A   FK +KS VE E    IKCLR +RGGEF S +F+EF
Sbjct: 498 ISFIDDFSRKAWIYLLVEKSKALVIFKQYKSCVEKETSSYIKCLRINRGGEFTSQDFNEF 557

Query: 181 YKTNGIKRHL 210
            K NGIKR L
Sbjct: 558 CKENGIKRQL 567



 Score = 64.3 bits (155), Expect(2) = 2e-28
 Identities = 29/44 (65%), Positives = 34/44 (77%)
 Frame = +3

Query: 216 SYTPQ*KRVDERKNKTTKNMVRSMISGKKMPKKFWPEAVLWSCY 347
           +YTPQ   V ERKN+T  NMVRSM+S KK+PK FWPEAV W+ Y
Sbjct: 570 AYTPQQNGVAERKNRTIMNMVRSMLSKKKLPKTFWPEAVNWTVY 613


>emb|CBI37296.3| unnamed protein product [Vitis vinifera]
          Length = 3048

 Score = 77.4 bits (189), Expect(2) = 2e-25
 Identities = 37/70 (52%), Positives = 47/70 (67%)
 Frame = +1

Query: 1   LSFINDYSRKCWIYLLVNKFDAFDHFKYFKSMVETEIDVKIKCLRTDRGGEFNSANFDEF 180
           L+F +D+SRK W+Y LV K +AF  FK FK+ VE E    ++CLRTDRGGEF S  F  F
Sbjct: 536 LTFTDDFSRKTWVYFLVEKSEAFAVFKSFKTYVEKETSSFLRCLRTDRGGEFTSQEFAIF 595

Query: 181 YKTNGIKRHL 210
              +GI+R L
Sbjct: 596 CDVHGIRRQL 605



 Score = 63.2 bits (152), Expect(2) = 2e-25
 Identities = 28/44 (63%), Positives = 34/44 (77%)
 Frame = +3

Query: 216 SYTPQ*KRVDERKNKTTKNMVRSMISGKKMPKKFWPEAVLWSCY 347
           +YTPQ   V ERKN+T  NMVRSM+S KK+PK FWPEAV W+ +
Sbjct: 608 AYTPQQNGVAERKNRTIMNMVRSMLSAKKLPKTFWPEAVNWTVH 651


>gb|AAG51247.1|AC055769_6 copia-type polyprotein, putative; 28768-32772 [Arabidopsis
           thaliana]
          Length = 1334

 Score = 87.4 bits (215), Expect(2) = 6e-25
 Identities = 41/70 (58%), Positives = 50/70 (71%)
 Frame = +1

Query: 1   LSFINDYSRKCWIYLLVNKFDAFDHFKYFKSMVETEIDVKIKCLRTDRGGEFNSANFDEF 180
           L+FI+D+SRKCW YLL  K + F  FK FK+ VE E   K+ CLR+DRGGE+NS  FDE+
Sbjct: 519 LNFIDDFSRKCWTYLLSEKSETFQFFKEFKAEVERESGKKLVCLRSDRGGEYNSREFDEY 578

Query: 181 YKTNGIKRHL 210
            K  GIKR L
Sbjct: 579 CKEFGIKRQL 588



 Score = 51.6 bits (122), Expect(2) = 6e-25
 Identities = 23/50 (46%), Positives = 31/50 (62%)
 Frame = +3

Query: 198 KETFKYSYTPQ*KRVDERKNKTTKNMVRSMISGKKMPKKFWPEAVLWSCY 347
           K     +YTPQ   V ERKN++  NM R M+    +P+KFWPEAV ++ Y
Sbjct: 585 KRQLTAAYTPQQNGVAERKNRSVMNMTRCMLMEMSVPRKFWPEAVQYAVY 634


>dbj|BAB11200.1| copia-type polyprotein [Arabidopsis thaliana]
           gi|13872710|emb|CAC37622.1| polyprotein [Arabidopsis
           thaliana]
          Length = 1334

 Score = 87.4 bits (215), Expect(2) = 6e-25
 Identities = 41/70 (58%), Positives = 50/70 (71%)
 Frame = +1

Query: 1   LSFINDYSRKCWIYLLVNKFDAFDHFKYFKSMVETEIDVKIKCLRTDRGGEFNSANFDEF 180
           L+FI+D+SRKCW YLL  K + F  FK FK+ VE E   K+ CLR+DRGGE+NS  FDE+
Sbjct: 519 LNFIDDFSRKCWTYLLSEKSETFQFFKEFKAEVERESGKKLVCLRSDRGGEYNSREFDEY 578

Query: 181 YKTNGIKRHL 210
            K  GIKR L
Sbjct: 579 CKEFGIKRQL 588



 Score = 51.6 bits (122), Expect(2) = 6e-25
 Identities = 23/50 (46%), Positives = 31/50 (62%)
 Frame = +3

Query: 198 KETFKYSYTPQ*KRVDERKNKTTKNMVRSMISGKKMPKKFWPEAVLWSCY 347
           K     +YTPQ   V ERKN++  NM R M+    +P+KFWPEAV ++ Y
Sbjct: 585 KRQLTAAYTPQQNGVAERKNRSVMNMTRCMLMEMSVPRKFWPEAVQYAVY 634


>gb|AAF25964.2|AC017118_1 F6N18.1 [Arabidopsis thaliana]
          Length = 1207

 Score = 87.4 bits (215), Expect(2) = 6e-25
 Identities = 41/70 (58%), Positives = 50/70 (71%)
 Frame = +1

Query: 1   LSFINDYSRKCWIYLLVNKFDAFDHFKYFKSMVETEIDVKIKCLRTDRGGEFNSANFDEF 180
           L+FI+D+SRKCW YLL  K + F  FK FK+ VE E   K+ CLR+DRGGE+NS  FDE+
Sbjct: 424 LNFIDDFSRKCWTYLLSEKSETFQFFKEFKAEVERESGKKLVCLRSDRGGEYNSREFDEY 483

Query: 181 YKTNGIKRHL 210
            K  GIKR L
Sbjct: 484 CKEFGIKRQL 493



 Score = 51.6 bits (122), Expect(2) = 6e-25
 Identities = 23/50 (46%), Positives = 31/50 (62%)
 Frame = +3

Query: 198 KETFKYSYTPQ*KRVDERKNKTTKNMVRSMISGKKMPKKFWPEAVLWSCY 347
           K     +YTPQ   V ERKN++  NM R M+    +P+KFWPEAV ++ Y
Sbjct: 490 KRQLTAAYTPQQNGVAERKNRSVMNMTRCMLMEMSVPRKFWPEAVQYAVY 539


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