BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00045505
         (374 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002515001.1| pentatricopeptide repeat-containing protein,...   120   9e-26
emb|CBI27550.3| unnamed protein product [Vitis vinifera]              113   1e-23
ref|XP_002266563.1| PREDICTED: pentatricopeptide repeat-containi...   113   1e-23
ref|XP_004159705.1| PREDICTED: pentatricopeptide repeat-containi...   112   2e-23
ref|XP_004135302.1| PREDICTED: pentatricopeptide repeat-containi...   112   2e-23

>ref|XP_002515001.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223546052|gb|EEF47555.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 466

 Score =  120 bits (302), Expect = 9e-26
 Identities = 51/94 (54%), Positives = 74/94 (78%)
 Frame = +3

Query: 93  SELGIVIASIHPGSSHEEVFRSLASNPSCETLKITHQLVDKLLFRFRDDWKSALGVFRWA 272
           S++ +++A I  GSSH+E+ +SL  +  C ++ ++H+LVDKLLFRF+DDWKSALGVFRWA
Sbjct: 16  SDIDVIVAKIRVGSSHDEIVQSLVHDEVCNSIHLSHELVDKLLFRFKDDWKSALGVFRWA 75

Query: 273 QSHPGYEPLPEIYDKLVDTLGKMKQMDKMNAMVQ 374
           +S  GY+  PE YD +VD +GKMKQMD+M  +++
Sbjct: 76  ESRAGYKHSPEAYDTMVDIMGKMKQMDQMEFLLE 109


>emb|CBI27550.3| unnamed protein product [Vitis vinifera]
          Length = 330

 Score =  113 bits (283), Expect = 1e-23
 Identities = 54/107 (50%), Positives = 75/107 (70%), Gaps = 9/107 (8%)
 Frame = +3

Query: 81  VGTG---------SELGIVIASIHPGSSHEEVFRSLASNPSCETLKITHQLVDKLLFRFR 233
           VGTG         S++ I+++ I  GSS +EVF+SL  + +C  + ++  LVD LL RF+
Sbjct: 30  VGTGIGNGEECIRSQIDIIVSRIREGSSDDEVFKSLVHDEACNAIPMSQNLVDVLLHRFK 89

Query: 234 DDWKSALGVFRWAQSHPGYEPLPEIYDKLVDTLGKMKQMDKMNAMVQ 374
           DDWKSALG+FRWA+S  GYE  PE YD +VD LGK+KQ+DKM A+++
Sbjct: 90  DDWKSALGLFRWAESRLGYEHAPEAYDMMVDILGKLKQVDKMRALME 136


>ref|XP_002266563.1| PREDICTED: pentatricopeptide repeat-containing protein At3g04130,
           mitochondrial [Vitis vinifera]
          Length = 496

 Score =  113 bits (283), Expect = 1e-23
 Identities = 54/107 (50%), Positives = 75/107 (70%), Gaps = 9/107 (8%)
 Frame = +3

Query: 81  VGTG---------SELGIVIASIHPGSSHEEVFRSLASNPSCETLKITHQLVDKLLFRFR 233
           VGTG         S++ I+++ I  GSS +EVF+SL  + +C  + ++  LVD LL RF+
Sbjct: 30  VGTGIGNGEECIRSQIDIIVSRIREGSSDDEVFKSLVHDEACNAIPMSQNLVDVLLHRFK 89

Query: 234 DDWKSALGVFRWAQSHPGYEPLPEIYDKLVDTLGKMKQMDKMNAMVQ 374
           DDWKSALG+FRWA+S  GYE  PE YD +VD LGK+KQ+DKM A+++
Sbjct: 90  DDWKSALGLFRWAESRLGYEHAPEAYDMMVDILGKLKQVDKMRALME 136


>ref|XP_004159705.1| PREDICTED: pentatricopeptide repeat-containing protein At3g04130,
           mitochondrial-like [Cucumis sativus]
          Length = 488

 Score =  112 bits (281), Expect = 2e-23
 Identities = 50/94 (53%), Positives = 72/94 (76%)
 Frame = +3

Query: 93  SELGIVIASIHPGSSHEEVFRSLASNPSCETLKITHQLVDKLLFRFRDDWKSALGVFRWA 272
           S++  +IA +  GSS +EVF+SL  +P C +++++H LV KLL RF+DDWKSALGVFRWA
Sbjct: 38  SDIDFIIAKVQVGSSEDEVFQSLLQDPVCNSIQLSHDLVYKLLQRFKDDWKSALGVFRWA 97

Query: 273 QSHPGYEPLPEIYDKLVDTLGKMKQMDKMNAMVQ 374
           +S  G++  P++YD L+DTLGK KQ+ KM  M++
Sbjct: 98  ESLSGFKHTPDLYDILIDTLGKTKQLVKMRGMLE 131


>ref|XP_004135302.1| PREDICTED: pentatricopeptide repeat-containing protein At3g04130,
           mitochondrial-like [Cucumis sativus]
          Length = 519

 Score =  112 bits (281), Expect = 2e-23
 Identities = 50/94 (53%), Positives = 72/94 (76%)
 Frame = +3

Query: 93  SELGIVIASIHPGSSHEEVFRSLASNPSCETLKITHQLVDKLLFRFRDDWKSALGVFRWA 272
           S++  +IA +  GSS +EVF+SL  +P C +++++H LV KLL RF+DDWKSALGVFRWA
Sbjct: 69  SDIDFIIAKVQVGSSEDEVFQSLLQDPVCNSIQLSHDLVYKLLQRFKDDWKSALGVFRWA 128

Query: 273 QSHPGYEPLPEIYDKLVDTLGKMKQMDKMNAMVQ 374
           +S  G++  P++YD L+DTLGK KQ+ KM  M++
Sbjct: 129 ESLSGFKHTPDLYDILIDTLGKTKQLVKMRGMLE 162