BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00045477
         (287 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002278241.1| PREDICTED: pentatricopeptide repeat-containi...   134   1e-29
ref|XP_002306200.1| predicted protein [Populus trichocarpa] gi|2...   131   7e-29
ref|NP_195239.1| pentatricopeptide repeat-containing protein [Ar...   108   5e-22
ref|XP_002867090.1| pentatricopeptide repeat-containing protein ...   102   3e-20
ref|XP_002981045.1| hypothetical protein SELMODRAFT_334 [Selagin...    92   4e-17

>ref|XP_002278241.1| PREDICTED: pentatricopeptide repeat-containing protein At4g35130,
           chloroplastic [Vitis vinifera]
           gi|297744563|emb|CBI37825.3| unnamed protein product
           [Vitis vinifera]
          Length = 802

 Score =  134 bits (336), Expect = 1e-29
 Identities = 63/94 (67%), Positives = 78/94 (82%)
 Frame = +3

Query: 6   VKDLVSWNSMISGYVSAGDGFSALTHFRKMLALGMKYDRFSIISGLGACSFENFLRSGKE 185
           V+DLVSWNSMISGYVS GDG+ +L+ FR+M A G+K DRFS+I  LGACS E FLR+GKE
Sbjct: 189 VRDLVSWNSMISGYVSVGDGWRSLSCFREMQASGIKLDRFSVIGILGACSLEGFLRNGKE 248

Query: 186 IHCQIIRSGLGSDPMILTSLIDMYGKCGQVDYSE 287
           IHCQ++RS L  D M+ TSL+DMY KCG++DY+E
Sbjct: 249 IHCQMMRSRLELDVMVQTSLVDMYAKCGRMDYAE 282



 Score = 60.1 bits (144), Expect = 2e-07
 Identities = 31/91 (34%), Positives = 52/91 (57%)
 Frame = +3

Query: 3   NVKDLVSWNSMISGYVSAGDGFSALTHFRKMLALGMKYDRFSIISGLGACSFENFLRSGK 182
           N ++L+SWN+MI+ Y   G+   A+T F+ +    +K D  +I S L A +    LR  +
Sbjct: 391 NERNLISWNAMIASYTKNGENRKAMTLFQDLCNKTLKPDATTIASILPAYAELASLREAE 450

Query: 183 EIHCQIIRSGLGSDPMILTSLIDMYGKCGQV 275
           +IH  + +  L S+  +  S++ MYGKCG +
Sbjct: 451 QIHGYVTKLKLDSNTFVSNSIVFMYGKCGNL 481



 Score = 58.9 bits (141), Expect = 4e-07
 Identities = 32/94 (34%), Positives = 53/94 (56%), Gaps = 1/94 (1%)
 Frame = +3

Query: 9   KDLVSWNSMISGYVSAGDGFSALTHFRKMLALGMKY-DRFSIISGLGACSFENFLRSGKE 185
           K +V+WN+MI GY      F +  + RKM   G  + D  ++I+ L  C+    +  GK 
Sbjct: 291 KSIVAWNAMIGGYSLNAQSFESFAYVRKMQEGGKLHPDWITMINLLPPCAQLEAILLGKS 350

Query: 186 IHCQIIRSGLGSDPMILTSLIDMYGKCGQVDYSE 287
           +H   IR+G     ++ T+L+DMYG+CG++  +E
Sbjct: 351 VHGFAIRNGFLPHLVLETALVDMYGECGKLKPAE 384



 Score = 54.7 bits (130), Expect = 8e-06
 Identities = 32/92 (34%), Positives = 49/92 (53%)
 Frame = +3

Query: 12  DLVSWNSMISGYVSAGDGFSALTHFRKMLALGMKYDRFSIISGLGACSFENFLRSGKEIH 191
           D   WN MI G+V  G  + A+  + +M   G++ D F+    + AC     L  G+ +H
Sbjct: 90  DTFIWNVMIRGFVDNGLFWDAVDFYHRMEFGGVRGDNFTYPFVIKACGGLYDLAEGERVH 149

Query: 192 CQIIRSGLGSDPMILTSLIDMYGKCGQVDYSE 287
            ++I+SGL  D  I  SLI MY K G ++ +E
Sbjct: 150 GKVIKSGLDLDIYIGNSLIIMYAKIGCIESAE 181


>ref|XP_002306200.1| predicted protein [Populus trichocarpa] gi|222849164|gb|EEE86711.1|
           predicted protein [Populus trichocarpa]
          Length = 784

 Score =  131 bits (329), Expect = 7e-29
 Identities = 64/94 (68%), Positives = 75/94 (79%)
 Frame = +3

Query: 6   VKDLVSWNSMISGYVSAGDGFSALTHFRKMLALGMKYDRFSIISGLGACSFENFLRSGKE 185
           V+DLVSWNSM+SGY   GDG S+L  F++ML LG K DRF +IS LGACS E+ LRSG E
Sbjct: 187 VRDLVSWNSMVSGYQIDGDGLSSLMCFKEMLRLGNKADRFGMISALGACSIEHCLRSGME 246

Query: 186 IHCQIIRSGLGSDPMILTSLIDMYGKCGQVDYSE 287
           IHCQ+IRS L  D M+ TSLIDMYGKCG+VDY+E
Sbjct: 247 IHCQVIRSELELDIMVQTSLIDMYGKCGKVDYAE 280



 Score = 62.4 bits (150), Expect = 4e-08
 Identities = 34/91 (37%), Positives = 52/91 (57%)
 Frame = +3

Query: 3   NVKDLVSWNSMISGYVSAGDGFSALTHFRKMLALGMKYDRFSIISGLGACSFENFLRSGK 182
           N K++VSWN+M++ YV       AL  F+ +L   +K D  +I S L A +       GK
Sbjct: 373 NEKNMVSWNTMVAAYVQNEQYKEALKMFQHILNEPLKPDAITIASVLPAVAELASRSEGK 432

Query: 183 EIHCQIIRSGLGSDPMILTSLIDMYGKCGQV 275
           +IH  I++ GLGS+  I  +++ MY KCG +
Sbjct: 433 QIHSYIMKLGLGSNTFISNAIVYMYAKCGDL 463


>ref|NP_195239.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
           gi|75098809|sp|O49619.1|PP350_ARATH RecName:
           Full=Pentatricopeptide repeat-containing protein
           At4g35130, chloroplastic; Flags: Precursor
           gi|2924523|emb|CAA17777.1| putative protein [Arabidopsis
           thaliana] gi|7270464|emb|CAB80230.1| putative protein
           [Arabidopsis thaliana] gi|332661071|gb|AEE86471.1|
           pentatricopeptide repeat-containing protein [Arabidopsis
           thaliana]
          Length = 804

 Score =  108 bits (270), Expect = 5e-22
 Identities = 52/94 (55%), Positives = 70/94 (74%), Gaps = 1/94 (1%)
 Frame = +3

Query: 9   KDLVSWNSMISGYVSAGDGFSALTHFRKMLALGMKYDRFSIISGLGACSFENFLRSGKEI 188
           +D+VSWNSMISGY++ GDGFS+L  F++ML  G K DRFS +S LGACS     + GKEI
Sbjct: 194 RDIVSWNSMISGYLALGDGFSSLMLFKEMLKCGFKPDRFSTMSALGACSHVYSPKMGKEI 253

Query: 189 HCQIIRSGLGS-DPMILTSLIDMYGKCGQVDYSE 287
           HC  +RS + + D M++TS++DMY K G+V Y+E
Sbjct: 254 HCHAVRSRIETGDVMVMTSILDMYSKYGEVSYAE 287



 Score = 65.5 bits (158), Expect = 4e-09
 Identities = 34/90 (37%), Positives = 54/90 (60%)
 Frame = +3

Query: 9   KDLVSWNSMISGYVSAGDGFSALTHFRKMLALGMKYDRFSIISGLGACSFENFLRSGKEI 188
           K+++SWNS+I+ YV  G  +SAL  F+++    +  D  +I S L A +    L  G+EI
Sbjct: 394 KNVISWNSIIAAYVQNGKNYSALELFQELWDSSLVPDSTTIASILPAYAESLSLSEGREI 453

Query: 189 HCQIIRSGLGSDPMILTSLIDMYGKCGQVD 278
           H  I++S   S+ +IL SL+ MY  CG ++
Sbjct: 454 HAYIVKSRYWSNTIILNSLVHMYAMCGDLE 483



 Score = 55.8 bits (133), Expect = 4e-06
 Identities = 30/89 (33%), Positives = 46/89 (51%)
 Frame = +3

Query: 3   NVKDLVSWNSMISGYVSAGDGFSALTHFRKMLALGMKYDRFSIISGLGACSFENFLRSGK 182
           N  D   WN MI G+ S G    A+  + +M+  G+K D F+    + + +  + L  GK
Sbjct: 91  NKADAFLWNVMIKGFTSCGLYIEAVQFYSRMVFAGVKADTFTYPFVIKSVAGISSLEEGK 150

Query: 183 EIHCQIIRSGLGSDPMILTSLIDMYGKCG 269
           +IH  +I+ G  SD  +  SLI +Y K G
Sbjct: 151 KIHAMVIKLGFVSDVYVCNSLISLYMKLG 179


>ref|XP_002867090.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata] gi|297312926|gb|EFH43349.1|
           pentatricopeptide repeat-containing protein [Arabidopsis
           lyrata subsp. lyrata]
          Length = 803

 Score =  102 bits (254), Expect = 3e-20
 Identities = 49/94 (52%), Positives = 67/94 (71%), Gaps = 1/94 (1%)
 Frame = +3

Query: 9   KDLVSWNSMISGYVSAGDGFSALTHFRKMLALGMKYDRFSIISGLGACSFENFLRSGKEI 188
           +D+VSWNSMISGY++  DGF +L  F++ML  G K DRFS +S LGACS       GKE+
Sbjct: 190 RDIVSWNSMISGYLALEDGFRSLMLFKEMLKFGFKPDRFSTMSALGACSHVYSPNMGKEL 249

Query: 189 HCQIIRSGLGS-DPMILTSLIDMYGKCGQVDYSE 287
           HC  +RS + + D M++TS++DMY K G+V Y+E
Sbjct: 250 HCHAVRSRIETGDVMVMTSILDMYSKYGEVSYAE 283



 Score = 70.1 bits (170), Expect = 2e-10
 Identities = 36/90 (40%), Positives = 55/90 (61%)
 Frame = +3

Query: 9   KDLVSWNSMISGYVSAGDGFSALTHFRKMLALGMKYDRFSIISGLGACSFENFLRSGKEI 188
           K+L+SWNS+I+ YV  G  +SAL  F+K+    +  D  +I S L A +    L  G++I
Sbjct: 390 KNLISWNSIIAAYVQNGKNYSALELFQKLWDSSLLPDSTTIASILPAYAESLSLSEGRQI 449

Query: 189 HCQIIRSGLGSDPMILTSLIDMYGKCGQVD 278
           H  I++S  GS+ +IL SL+ MY  CG ++
Sbjct: 450 HAYIVKSRYGSNTIILNSLVHMYAMCGDLE 479


>ref|XP_002981045.1| hypothetical protein SELMODRAFT_334 [Selaginella moellendorffii]
           gi|300151099|gb|EFJ17746.1| hypothetical protein
           SELMODRAFT_334 [Selaginella moellendorffii]
          Length = 833

 Score = 92.0 bits (227), Expect = 4e-17
 Identities = 41/92 (44%), Positives = 66/92 (71%), Gaps = 2/92 (2%)
 Frame = +3

Query: 9   KDLVSWNSMISGYVSAGDGFSALTHFRKMLALGMKYDRFSIISGLGACSFENFLRSGKEI 188
           +D++SWN+MI+GYV AGD FSAL+ F++ML  G++ ++ + +S L  C    FLR G+ I
Sbjct: 476 RDVISWNTMITGYVQAGDSFSALSIFKRMLLEGIRGNQVTFMSLLSVCDSRAFLRQGETI 535

Query: 189 HCQIIRS--GLGSDPMILTSLIDMYGKCGQVD 278
           H ++I     L SDP++  ++++MYGKCG++D
Sbjct: 536 HRRVINQTPELSSDPIVAAAIVNMYGKCGELD 567



 Score = 68.9 bits (167), Expect = 4e-10
 Identities = 36/90 (40%), Positives = 50/90 (55%)
 Frame = +3

Query: 9   KDLVSWNSMISGYVSAGDGFSALTHFRKMLALGMKYDRFSIISGLGACSFENFLRSGKEI 188
           ++L SWNSMIS Y   G    A     +M   G+  DR + I+ L AC     +R GK I
Sbjct: 579 RNLASWNSMISAYALHGRAEQAFDLSERMRREGVLPDRVTFITLLNACVAGGAVRHGKMI 638

Query: 189 HCQIIRSGLGSDPMILTSLIDMYGKCGQVD 278
           H +II SGL  D ++  +L++ Y KCG +D
Sbjct: 639 HARIIDSGLEKDTVVANALVNFYSKCGNLD 668



 Score = 65.5 bits (158), Expect = 4e-09
 Identities = 30/87 (34%), Positives = 49/87 (56%)
 Frame = +3

Query: 9   KDLVSWNSMISGYVSAGDGFSALTHFRKMLALGMKYDRFSIISGLGACSFENFLRSGKEI 188
           +DL+SWN+ I+    +GD    L   + M   GM  D+ + +S L AC     L +G+ I
Sbjct: 164 RDLISWNNAIAANAESGDYTFTLALLKSMQLEGMAPDKVTFVSALNACIGSRSLSNGRLI 223

Query: 189 HCQIIRSGLGSDPMILTSLIDMYGKCG 269
           H  ++  G+  D ++ T+L+ MYG+CG
Sbjct: 224 HALVLERGMEGDVVLGTALVTMYGRCG 250



 Score = 57.4 bits (137), Expect = 1e-06
 Identities = 31/91 (34%), Positives = 48/91 (52%), Gaps = 1/91 (1%)
 Frame = +3

Query: 9   KDLVSWNSMISGYVSAGDGFSALTHFRKMLALGMKYDRFSIISGLGACSFENFLRSGKEI 188
           +D+VSW +MIS Y   G    AL  F +M    +  +R + ++ L AC    FL  GK+I
Sbjct: 62  RDVVSWTAMISAYAQTGHQRQALDLFTEMAGSSLDPNRVTFLALLEACDSPEFLEDGKQI 121

Query: 189 HCQI-IRSGLGSDPMILTSLIDMYGKCGQVD 278
           H ++     L SD  +  +++ MY KC + D
Sbjct: 122 HARVSALQLLESDVPVANAVMGMYRKCERAD 152



 Score = 57.4 bits (137), Expect = 1e-06
 Identities = 29/86 (33%), Positives = 45/86 (52%)
 Frame = +3

Query: 9   KDLVSWNSMISGYVSAGDGFSALTHFRKMLALGMKYDRFSIISGLGACSFENFLRSGKEI 188
           +DLVSWN+MIS Y  +G     +  F +M A  +  DR + +  L AC+    L SG+ +
Sbjct: 367 RDLVSWNAMISAYAQSGLAREVVNLFHRMRAERVPPDRITFLMALDACAEIRDLDSGRTV 426

Query: 189 HCQIIRSGLGSDPMILTSLIDMYGKC 266
           H   + SG GS   +  + + +Y  C
Sbjct: 427 HHLSVESGFGSCISVANATMHLYSSC 452