BLASTX nr result

ID: Lithospermum22_contig00045390 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00045390
         (275 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002454941.1| hypothetical protein SORBIDRAFT_03g001780 [S...    66   3e-09
gb|AAB82639.1| putative non-LTR retroelement reverse transcripta...    65   4e-09
gb|EAZ08016.1| hypothetical protein OsI_30282 [Oryza sativa Indi...    65   6e-09
gb|ABA97563.1| retrotransposon protein, putative, unclassified [...    65   7e-09
emb|CAA73803.1| reverse transcriptase [Allium cepa]                    65   7e-09

>ref|XP_002454941.1| hypothetical protein SORBIDRAFT_03g001780 [Sorghum bicolor]
           gi|241926916|gb|EES00061.1| hypothetical protein
           SORBIDRAFT_03g001780 [Sorghum bicolor]
          Length = 631

 Score = 66.2 bits (160), Expect = 3e-09
 Identities = 30/57 (52%), Positives = 43/57 (75%)
 Frame = +2

Query: 98  MKDFRPISCCNVIYNGISSVIAHRLKKMLHKIVGVHQTVYVPGRKISDGILLIHELM 268
           +KD RPIS CNV+Y  IS V+A+RLKK+L  I+   Q+ +VPGR I+D +LL +E++
Sbjct: 82  LKDLRPISLCNVLYKLISKVLANRLKKILPNIISNSQSAFVPGRLITDNVLLAYEIV 138


>gb|AAB82639.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
           thaliana]
          Length = 1374

 Score = 65.5 bits (158), Expect = 4e-09
 Identities = 31/57 (54%), Positives = 40/57 (70%)
 Frame = +2

Query: 98  MKDFRPISCCNVIYNGISSVIAHRLKKMLHKIVGVHQTVYVPGRKISDGILLIHELM 268
           M DFRPIS CNVIY  I  ++A+RLKK+L  ++   Q  +V GR ISD IL+ HEL+
Sbjct: 501 MTDFRPISLCNVIYKVIGKLMANRLKKILPSLISETQAAFVKGRLISDNILIAHELL 557


>gb|EAZ08016.1| hypothetical protein OsI_30282 [Oryza sativa Indica Group]
          Length = 632

 Score = 65.1 bits (157), Expect = 6e-09
 Identities = 27/56 (48%), Positives = 44/56 (78%)
 Frame = +2

Query: 98  MKDFRPISCCNVIYNGISSVIAHRLKKMLHKIVGVHQTVYVPGRKISDGILLIHEL 265
           +KD RPIS C+++Y   S V+A+RLK++L +I+ ++Q+ +VPGR I+D +LL +EL
Sbjct: 62  LKDLRPISLCSIVYKIASKVVANRLKRILPEIISLNQSAFVPGRMITDNVLLAYEL 117


>gb|ABA97563.1| retrotransposon protein, putative, unclassified [Oryza sativa
           Japonica Group]
          Length = 839

 Score = 64.7 bits (156), Expect = 7e-09
 Identities = 29/56 (51%), Positives = 42/56 (75%)
 Frame = +2

Query: 98  MKDFRPISCCNVIYNGISSVIAHRLKKMLHKIVGVHQTVYVPGRKISDGILLIHEL 265
           +KD RPIS CNV+Y  +S V+A+RLKK+L +++   Q+ + PGR ISD IL+ +EL
Sbjct: 379 IKDLRPISVCNVLYKIVSKVLANRLKKILPEVISQSQSAFFPGRLISDNILVAYEL 434


>emb|CAA73803.1| reverse transcriptase [Allium cepa]
          Length = 137

 Score = 64.7 bits (156), Expect = 7e-09
 Identities = 31/56 (55%), Positives = 38/56 (67%)
 Frame = +2

Query: 107 FRPISCCNVIYNGISSVIAHRLKKMLHKIVGVHQTVYVPGRKISDGILLIHELMDG 274
           FRPISCCN IY  IS V+A RLK +L  +V  +Q  Y+ GR I D +LL HEL+ G
Sbjct: 3   FRPISCCNTIYKCISKVLASRLKHVLPTLVSPNQAAYLSGRNILDHVLLSHELIKG 58


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