BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00045362
         (295 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002528143.1| pentatricopeptide repeat-containing protein,...   127   7e-28
ref|XP_002275605.1| PREDICTED: pentatricopeptide repeat-containi...   122   4e-26
emb|CBI27232.3| unnamed protein product [Vitis vinifera]              122   4e-26
ref|XP_002304600.1| predicted protein [Populus trichocarpa] gi|2...   118   4e-25
ref|XP_003534864.1| PREDICTED: pentatricopeptide repeat-containi...   115   3e-24

>ref|XP_002528143.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223532441|gb|EEF34234.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 653

 Score =  127 bits (320), Expect = 7e-28
 Identities = 56/95 (58%), Positives = 79/95 (83%)
 Frame = +3

Query: 3   YSSLIKGFFEVAQCDKAMQLWKDMWEIYEIDSEVCYSIVISGLCRNGRLEEAKLVWEQMF 182
           +SSL+KGFFEV    KA+++WKDM +I   ++EVCYS++I GLC++G++ EA +VW +M 
Sbjct: 429 FSSLMKGFFEVGNSHKAIEVWKDMTKINCAENEVCYSVLIHGLCKDGKVMEAMMVWAKML 488

Query: 183 TRGCKPDVVAYTSMIQGLCNAGSMEQGLKLFHEML 287
             GC+PDVVAY+SMIQGLC+AGS+E+ LKL++EML
Sbjct: 489 ATGCRPDVVAYSSMIQGLCDAGSVEEALKLYNEML 523



 Score = 60.8 bits (146), Expect = 1e-07
 Identities = 29/95 (30%), Positives = 52/95 (54%)
 Frame = +3

Query: 3   YSSLIKGFFEVAQCDKAMQLWKDMWEIYEIDSEVCYSIVISGLCRNGRLEEAKLVWEQMF 182
           Y +L+ G  +V + D+A+ L  +M       S   ++++I+GLC+ G       + + MF
Sbjct: 219 YCTLMDGLCKVDRIDEAVSLLDEMQIEGCFPSPATFNVLINGLCKKGDFTRVTKLVDNMF 278

Query: 183 TRGCKPDVVAYTSMIQGLCNAGSMEQGLKLFHEML 287
            +GC P+ V Y ++I GLC  G +++ L L   M+
Sbjct: 279 LKGCVPNEVTYNTLIHGLCLKGKLDKALSLLDRMV 313



 Score = 60.1 bits (144), Expect = 2e-07
 Identities = 26/94 (27%), Positives = 57/94 (60%)
 Frame = +3

Query: 3   YSSLIKGFFEVAQCDKAMQLWKDMWEIYEIDSEVCYSIVISGLCRNGRLEEAKLVWEQMF 182
           YS L+ G F+  + ++AM+L+K+  +     + V YS ++ GLCR+ + +EA  +  +M 
Sbjct: 359 YSVLVSGLFKEGKSEEAMRLFKESMDKGCKLNTVLYSALVDGLCRDRKPDEAMKILSEMT 418

Query: 183 TRGCKPDVVAYTSMIQGLCNAGSMEQGLKLFHEM 284
            +GC P+   ++S+++G    G+  + ++++ +M
Sbjct: 419 DKGCAPNAFTFSSLMKGFFEVGNSHKAIEVWKDM 452



 Score = 57.0 bits (136), Expect = 2e-06
 Identities = 28/97 (28%), Positives = 54/97 (55%)
 Frame = +3

Query: 3   YSSLIKGFFEVAQCDKAMQLWKDMWEIYEIDSEVCYSIVISGLCRNGRLEEAKLVWEQMF 182
           Y ++I G  +  +     ++   M E   I +E  YS+++SGL + G+ EEA  ++++  
Sbjct: 324 YGTIINGLVKQGRALDGARVLVLMEERGYIVNEYVYSVLVSGLFKEGKSEEAMRLFKESM 383

Query: 183 TRGCKPDVVAYTSMIQGLCNAGSMEQGLKLFHEMLYK 293
            +GCK + V Y++++ GLC     ++ +K+  EM  K
Sbjct: 384 DKGCKLNTVLYSALVDGLCRDRKPDEAMKILSEMTDK 420


>ref|XP_002275605.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g20090-like [Vitis vinifera]
          Length = 644

 Score =  122 bits (305), Expect = 4e-26
 Identities = 55/95 (57%), Positives = 74/95 (77%)
 Frame = +3

Query: 3   YSSLIKGFFEVAQCDKAMQLWKDMWEIYEIDSEVCYSIVISGLCRNGRLEEAKLVWEQMF 182
           YSSLIKGFF+     KA+++WK+M +   + +E+CYS++I GLC +G+L EA ++W  M 
Sbjct: 420 YSSLIKGFFKTGNSQKAIRVWKEMAKNNCVPNEICYSVLIHGLCEDGKLREAMMMWTHML 479

Query: 183 TRGCKPDVVAYTSMIQGLCNAGSMEQGLKLFHEML 287
            RG +PDVVAY+SMI GLCNAGS+E GLKLF+EML
Sbjct: 480 GRGLRPDVVAYSSMIHGLCNAGSVEVGLKLFNEML 514



 Score = 77.8 bits (190), Expect = 9e-13
 Identities = 37/94 (39%), Positives = 60/94 (63%)
 Frame = +3

Query: 3   YSSLIKGFFEVAQCDKAMQLWKDMWEIYEIDSEVCYSIVISGLCRNGRLEEAKLVWEQMF 182
           YS+LI G F+  + ++AM LWK M E     + V YS +I GLCR G+L+EAK +  +M 
Sbjct: 350 YSTLISGLFKEEKSEEAMGLWKKMVEKGCQPNIVVYSALIDGLCREGKLDEAKEILCEMV 409

Query: 183 TRGCKPDVVAYTSMIQGLCNAGSMEQGLKLFHEM 284
            +GC P+   Y+S+I+G    G+ ++ ++++ EM
Sbjct: 410 NKGCTPNAFTYSSLIKGFFKTGNSQKAIRVWKEM 443



 Score = 66.2 bits (160), Expect = 3e-09
 Identities = 31/97 (31%), Positives = 56/97 (57%)
 Frame = +3

Query: 3   YSSLIKGFFEVAQCDKAMQLWKDMWEIYEIDSEVCYSIVISGLCRNGRLEEAKLVWEQMF 182
           Y +LI G  +  +    + L   + E     +E  YS +ISGL +  + EEA  +W++M 
Sbjct: 315 YGTLINGLVKQGRSVDGVHLLSSLEERGHHANEYAYSTLISGLFKEEKSEEAMGLWKKMV 374

Query: 183 TRGCKPDVVAYTSMIQGLCNAGSMEQGLKLFHEMLYK 293
            +GC+P++V Y+++I GLC  G +++  ++  EM+ K
Sbjct: 375 EKGCQPNIVVYSALIDGLCREGKLDEAKEILCEMVNK 411



 Score = 58.5 bits (140), Expect = 5e-07
 Identities = 28/95 (29%), Positives = 53/95 (55%)
 Frame = +3

Query: 3   YSSLIKGFFEVAQCDKAMQLWKDMWEIYEIDSEVCYSIVISGLCRNGRLEEAKLVWEQMF 182
           Y +L+ G  +  + D+A+ L  +M       S V ++++I+GLC+ G +     + + MF
Sbjct: 210 YCTLMDGLCKEDRIDEAVLLLDEMQIEGCFPSSVTFNVLINGLCKKGDMVRVTKLVDNMF 269

Query: 183 TRGCKPDVVAYTSMIQGLCNAGSMEQGLKLFHEML 287
            +GC P+ V Y ++I GLC  G +++ + L   M+
Sbjct: 270 LKGCVPNEVTYNTIINGLCLKGKLDKAVSLLDRMV 304



 Score = 57.8 bits (138), Expect = 9e-07
 Identities = 30/98 (30%), Positives = 56/98 (57%), Gaps = 1/98 (1%)
 Frame = +3

Query: 3   YSSLIKGFFEVAQCDKAMQLWKDMWEIYEIDSEV-CYSIVISGLCRNGRLEEAKLVWEQM 179
           ++ +IK   ++   D+A++++++M  I + + +V  Y  ++ GLC+  R++EA L+ ++M
Sbjct: 175 FNLVIKAMCKLGLVDRAIEVFREM-AIQKCEPDVFTYCTLMDGLCKEDRIDEAVLLLDEM 233

Query: 180 FTRGCKPDVVAYTSMIQGLCNAGSMEQGLKLFHEMLYK 293
              GC P  V +  +I GLC  G M +  KL   M  K
Sbjct: 234 QIEGCFPSSVTFNVLINGLCKKGDMVRVTKLVDNMFLK 271


>emb|CBI27232.3| unnamed protein product [Vitis vinifera]
          Length = 660

 Score =  122 bits (305), Expect = 4e-26
 Identities = 55/95 (57%), Positives = 74/95 (77%)
 Frame = +3

Query: 3   YSSLIKGFFEVAQCDKAMQLWKDMWEIYEIDSEVCYSIVISGLCRNGRLEEAKLVWEQMF 182
           YSSLIKGFF+     KA+++WK+M +   + +E+CYS++I GLC +G+L EA ++W  M 
Sbjct: 436 YSSLIKGFFKTGNSQKAIRVWKEMAKNNCVPNEICYSVLIHGLCEDGKLREAMMMWTHML 495

Query: 183 TRGCKPDVVAYTSMIQGLCNAGSMEQGLKLFHEML 287
            RG +PDVVAY+SMI GLCNAGS+E GLKLF+EML
Sbjct: 496 GRGLRPDVVAYSSMIHGLCNAGSVEVGLKLFNEML 530



 Score = 77.8 bits (190), Expect = 9e-13
 Identities = 37/94 (39%), Positives = 60/94 (63%)
 Frame = +3

Query: 3   YSSLIKGFFEVAQCDKAMQLWKDMWEIYEIDSEVCYSIVISGLCRNGRLEEAKLVWEQMF 182
           YS+LI G F+  + ++AM LWK M E     + V YS +I GLCR G+L+EAK +  +M 
Sbjct: 366 YSTLISGLFKEEKSEEAMGLWKKMVEKGCQPNIVVYSALIDGLCREGKLDEAKEILCEMV 425

Query: 183 TRGCKPDVVAYTSMIQGLCNAGSMEQGLKLFHEM 284
            +GC P+   Y+S+I+G    G+ ++ ++++ EM
Sbjct: 426 NKGCTPNAFTYSSLIKGFFKTGNSQKAIRVWKEM 459



 Score = 66.2 bits (160), Expect = 3e-09
 Identities = 31/97 (31%), Positives = 56/97 (57%)
 Frame = +3

Query: 3   YSSLIKGFFEVAQCDKAMQLWKDMWEIYEIDSEVCYSIVISGLCRNGRLEEAKLVWEQMF 182
           Y +LI G  +  +    + L   + E     +E  YS +ISGL +  + EEA  +W++M 
Sbjct: 331 YGTLINGLVKQGRSVDGVHLLSSLEERGHHANEYAYSTLISGLFKEEKSEEAMGLWKKMV 390

Query: 183 TRGCKPDVVAYTSMIQGLCNAGSMEQGLKLFHEMLYK 293
            +GC+P++V Y+++I GLC  G +++  ++  EM+ K
Sbjct: 391 EKGCQPNIVVYSALIDGLCREGKLDEAKEILCEMVNK 427



 Score = 58.5 bits (140), Expect = 5e-07
 Identities = 28/95 (29%), Positives = 53/95 (55%)
 Frame = +3

Query: 3   YSSLIKGFFEVAQCDKAMQLWKDMWEIYEIDSEVCYSIVISGLCRNGRLEEAKLVWEQMF 182
           Y +L+ G  +  + D+A+ L  +M       S V ++++I+GLC+ G +     + + MF
Sbjct: 226 YCTLMDGLCKEDRIDEAVLLLDEMQIEGCFPSSVTFNVLINGLCKKGDMVRVTKLVDNMF 285

Query: 183 TRGCKPDVVAYTSMIQGLCNAGSMEQGLKLFHEML 287
            +GC P+ V Y ++I GLC  G +++ + L   M+
Sbjct: 286 LKGCVPNEVTYNTIINGLCLKGKLDKAVSLLDRMV 320



 Score = 57.8 bits (138), Expect = 9e-07
 Identities = 30/98 (30%), Positives = 56/98 (57%), Gaps = 1/98 (1%)
 Frame = +3

Query: 3   YSSLIKGFFEVAQCDKAMQLWKDMWEIYEIDSEV-CYSIVISGLCRNGRLEEAKLVWEQM 179
           ++ +IK   ++   D+A++++++M  I + + +V  Y  ++ GLC+  R++EA L+ ++M
Sbjct: 191 FNLVIKAMCKLGLVDRAIEVFREM-AIQKCEPDVFTYCTLMDGLCKEDRIDEAVLLLDEM 249

Query: 180 FTRGCKPDVVAYTSMIQGLCNAGSMEQGLKLFHEMLYK 293
              GC P  V +  +I GLC  G M +  KL   M  K
Sbjct: 250 QIEGCFPSSVTFNVLINGLCKKGDMVRVTKLVDNMFLK 287


>ref|XP_002304600.1| predicted protein [Populus trichocarpa] gi|222842032|gb|EEE79579.1|
           predicted protein [Populus trichocarpa]
          Length = 641

 Score =  118 bits (296), Expect = 4e-25
 Identities = 54/95 (56%), Positives = 73/95 (76%)
 Frame = +3

Query: 3   YSSLIKGFFEVAQCDKAMQLWKDMWEIYEIDSEVCYSIVISGLCRNGRLEEAKLVWEQMF 182
           YSSL+KGFFE     KA+++WKDM +     +EVCYS++I GLC++G+++EA +VW QM 
Sbjct: 417 YSSLMKGFFEAGNGHKAIEMWKDMAKHNFTQNEVCYSVLIHGLCKDGKVKEAMMVWAQML 476

Query: 183 TRGCKPDVVAYTSMIQGLCNAGSMEQGLKLFHEML 287
            +GCKPDVVAY SMI GL NAG +E  L+L++EML
Sbjct: 477 GKGCKPDVVAYGSMINGLSNAGLVEDALQLYNEML 511



 Score = 69.3 bits (168), Expect = 3e-10
 Identities = 35/95 (36%), Positives = 61/95 (64%), Gaps = 1/95 (1%)
 Frame = +3

Query: 3   YSSLIKGFFEVAQCDKAMQLWKDMWEIYEID-SEVCYSIVISGLCRNGRLEEAKLVWEQM 179
           YS+LI G F+  +  +AMQL+K+M  + E + + + YS VI GLCR+G+ +EA  V  +M
Sbjct: 347 YSALISGLFKEGKSQEAMQLFKEM-TVKECELNTIVYSAVIDGLCRDGKPDEALEVLSEM 405

Query: 180 FTRGCKPDVVAYTSMIQGLCNAGSMEQGLKLFHEM 284
               CKP+   Y+S+++G   AG+  + ++++ +M
Sbjct: 406 TNNRCKPNAYTYSSLMKGFFEAGNGHKAIEMWKDM 440



 Score = 63.2 bits (152), Expect = 2e-08
 Identities = 30/95 (31%), Positives = 53/95 (55%)
 Frame = +3

Query: 3   YSSLIKGFFEVAQCDKAMQLWKDMWEIYEIDSEVCYSIVISGLCRNGRLEEAKLVWEQMF 182
           Y +L+ G  +  + D+A+ L  +M       S V ++++I+GLC+ G L     + + MF
Sbjct: 207 YCTLMDGLCKADRIDEAVSLLDEMQIDGCFPSPVTFNVLINGLCKKGDLARVAKLVDNMF 266

Query: 183 TRGCKPDVVAYTSMIQGLCNAGSMEQGLKLFHEML 287
            +GC P+ V Y ++I GLC  G +E+ + L   M+
Sbjct: 267 LKGCAPNEVTYNTLIHGLCLKGKLEKAISLLDRMV 301


>ref|XP_003534864.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g20090-like [Glycine max]
          Length = 642

 Score =  115 bits (289), Expect = 3e-24
 Identities = 54/95 (56%), Positives = 73/95 (76%)
 Frame = +3

Query: 3   YSSLIKGFFEVAQCDKAMQLWKDMWEIYEIDSEVCYSIVISGLCRNGRLEEAKLVWEQMF 182
           YSSL++G+FE     KA+ +WK+M     I +EVCYSI+I+GLC++G+  EA +VW+QM 
Sbjct: 418 YSSLMRGYFEAGDSHKAILVWKEMANNNCIHNEVCYSILINGLCKDGKFMEALMVWKQML 477

Query: 183 TRGCKPDVVAYTSMIQGLCNAGSMEQGLKLFHEML 287
           +RG K DVVAY+SMI G CNA  +EQGLKLF++ML
Sbjct: 478 SRGIKLDVVAYSSMIHGFCNANLVEQGLKLFNQML 512



 Score = 65.1 bits (157), Expect = 6e-09
 Identities = 30/95 (31%), Positives = 56/95 (58%)
 Frame = +3

Query: 3   YSSLIKGFFEVAQCDKAMQLWKDMWEIYEIDSEVCYSIVISGLCRNGRLEEAKLVWEQMF 182
           YS+L+ G  +  + D+A+ L  +M       + V ++++IS LC+ G L  A  + + MF
Sbjct: 208 YSTLMHGLCKEERIDEAVSLLDEMQVEGTFPNLVAFNVLISALCKKGDLGRAAKLVDNMF 267

Query: 183 TRGCKPDVVAYTSMIQGLCNAGSMEQGLKLFHEML 287
            +GC P+ V Y +++ GLC  G +E+ + L ++M+
Sbjct: 268 LKGCVPNEVTYNALVHGLCLKGKLEKAVSLLNQMV 302



 Score = 62.8 bits (151), Expect = 3e-08
 Identities = 28/97 (28%), Positives = 51/97 (52%)
 Frame = +3

Query: 3   YSSLIKGFFEVAQCDKAMQLWKDMWEIYEIDSEVCYSIVISGLCRNGRLEEAKLVWEQMF 182
           + +LI GF    +     ++   +       +E  YS +ISGLC+ G+  +A  +W++M 
Sbjct: 313 FGTLINGFVMQGRASDGTRVLVSLEARGHRGNEYVYSSLISGLCKEGKFNQAMELWKEMV 372

Query: 183 TRGCKPDVVAYTSMIQGLCNAGSMEQGLKLFHEMLYK 293
            +GC P+ + Y+++I GLC  G +++      EM  K
Sbjct: 373 GKGCGPNTIVYSALIDGLCREGKLDEARGFLSEMKNK 409