BLASTX nr result

ID: Lithospermum22_contig00045294 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00045294
         (488 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI16742.3| unnamed protein product [Vitis vinifera]              207   6e-52
ref|XP_003534752.1| PREDICTED: pentatricopeptide repeat-containi...   206   1e-51
ref|XP_002520828.1| pentatricopeptide repeat-containing protein,...   201   5e-50
emb|CAN79322.1| hypothetical protein VITISV_018985 [Vitis vinifera]   175   4e-42
ref|XP_004160443.1| PREDICTED: pentatricopeptide repeat-containi...   149   2e-34

>emb|CBI16742.3| unnamed protein product [Vitis vinifera]
          Length = 674

 Score =  207 bits (528), Expect = 6e-52
 Identities = 101/162 (62%), Positives = 127/162 (78%), Gaps = 1/162 (0%)
 Frame = +1

Query: 1   VKKGRKLFNSM-RAFNLVPNAGHYSSLVDILGRSGLVNEAVKVVLEMPAEQRDGAVLGAV 177
           VKKG+KLF+SM RA+ L P A HYS LVDILGR+G V+EA+ VV +MP  +RDGAVLGA+
Sbjct: 497 VKKGQKLFDSMSRAYGLEPRAEHYSCLVDILGRAGQVHEAMDVVWKMPECERDGAVLGAL 556

Query: 178 LSACRLHGDVEVANQVGDKLFELEPDKSGPYILLANSYATSGKWDEFAQVRKKMKENNVR 357
           L ACRLHG+VE+A+ +G KL EL+P+ SG Y+LLAN +A  G WDEFA+VRKKMK+ NVR
Sbjct: 557 LGACRLHGNVEMADYIGQKLIELQPNSSGGYVLLANVFAARGNWDEFAEVRKKMKDRNVR 616

Query: 358 KIPGYSQIEINGKSHKFVVGDKSHTDIKEIDSFLKRSLWPLM 483
           K+PG+SQIE+ GK H F  GDKSH  ++EI   L+  L P+M
Sbjct: 617 KVPGFSQIEVKGKCHAFFAGDKSHPQVEEIYELLREKLLPIM 658


>ref|XP_003534752.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g09410-like [Glycine max]
          Length = 669

 Score =  206 bits (525), Expect = 1e-51
 Identities = 100/163 (61%), Positives = 130/163 (79%), Gaps = 1/163 (0%)
 Frame = +1

Query: 1   VKKGRKLFNSMRA-FNLVPNAGHYSSLVDILGRSGLVNEAVKVVLEMPAEQRDGAVLGAV 177
           V +GR+LF+S++  +NL P A HYS LVDILGR+GLV+EA+ VV  +P   RD AVL A+
Sbjct: 493 VHQGRRLFDSIKGTYNLTPKAEHYSCLVDILGRAGLVDEAMDVVATIPPSARDEAVLVAL 552

Query: 178 LSACRLHGDVEVANQVGDKLFELEPDKSGPYILLANSYATSGKWDEFAQVRKKMKENNVR 357
           L ACRLHGDV +AN +G+KL ELEP  SG Y+LLAN+YA  G+WDEFA+VRK+M+E NV+
Sbjct: 553 LGACRLHGDVAIANSIGEKLLELEPSSSGGYVLLANTYAAEGQWDEFAKVRKRMRERNVK 612

Query: 358 KIPGYSQIEINGKSHKFVVGDKSHTDIKEIDSFLKRSLWPLMR 486
           +IPGYSQI+I GK+H FVVG++SH  I+EI   L+++L PLMR
Sbjct: 613 RIPGYSQIQITGKNHVFVVGERSHPQIEEIYRLLQQNLQPLMR 655


>ref|XP_002520828.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223539959|gb|EEF41537.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 656

 Score =  201 bits (511), Expect = 5e-50
 Identities = 101/163 (61%), Positives = 125/163 (76%), Gaps = 1/163 (0%)
 Frame = +1

Query: 1   VKKGRKLFNSMR-AFNLVPNAGHYSSLVDILGRSGLVNEAVKVVLEMPAEQRDGAVLGAV 177
           VKKG+ LF+SM  A+ + P A HYS LVDILGR+G +N+A+KVV EMP  + DGAVLGA+
Sbjct: 479 VKKGQMLFDSMSCAYGVEPRAEHYSCLVDILGRAGEMNKAMKVVSEMPPHECDGAVLGAL 538

Query: 178 LSACRLHGDVEVANQVGDKLFELEPDKSGPYILLANSYATSGKWDEFAQVRKKMKENNVR 357
           L ACRLH DV +AN +G+KL E EP  SG Y+LLAN+YA  GKW+EFA+VRK+MKE NV+
Sbjct: 539 LGACRLHKDVGLANHIGEKLIEKEPTSSGSYVLLANAYAACGKWNEFAEVRKEMKERNVK 598

Query: 358 KIPGYSQIEINGKSHKFVVGDKSHTDIKEIDSFLKRSLWPLMR 486
           K PG+SQIE+ GKSH F V D+SH  ++EI  FL   L PLMR
Sbjct: 599 KEPGFSQIEVKGKSHVFFVRDRSHPQLEEIYLFLDEKLLPLMR 641


>emb|CAN79322.1| hypothetical protein VITISV_018985 [Vitis vinifera]
          Length = 932

 Score =  175 bits (443), Expect = 4e-42
 Identities = 86/129 (66%), Positives = 107/129 (82%), Gaps = 1/129 (0%)
 Frame = +1

Query: 1   VKKGRKLFNSM-RAFNLVPNAGHYSSLVDILGRSGLVNEAVKVVLEMPAEQRDGAVLGAV 177
           VKKG+KLF+SM RA+ L P A HYS LVDILGR+G V+EA+ VV +MP  +RDGAVLGA+
Sbjct: 403 VKKGQKLFDSMSRAYGLEPRAEHYSCLVDILGRAGQVHEAMDVVWKMPECERDGAVLGAL 462

Query: 178 LSACRLHGDVEVANQVGDKLFELEPDKSGPYILLANSYATSGKWDEFAQVRKKMKENNVR 357
           L ACRLHG+VE+A+ +G KL EL+P+ SG Y+LLAN +A  G WDEFA+VRKKMK+ NVR
Sbjct: 463 LGACRLHGNVEMADYIGQKLIELQPNSSGGYVLLANVFAARGNWDEFAEVRKKMKDRNVR 522

Query: 358 KIPGYSQIE 384
           K+PG+SQIE
Sbjct: 523 KVPGFSQIE 531


>ref|XP_004160443.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g02750-like [Cucumis sativus]
          Length = 776

 Score =  149 bits (376), Expect = 2e-34
 Identities = 70/155 (45%), Positives = 107/155 (69%), Gaps = 1/155 (0%)
 Frame = +1

Query: 1   VKKGRKLFNSM-RAFNLVPNAGHYSSLVDILGRSGLVNEAVKVVLEMPAEQRDGAVLGAV 177
           V KG + FNSM + + +  NA HY+ ++D+LGR+G ++EA+ ++  MP    D A  GA+
Sbjct: 521 VDKGMEYFNSMYQNYGITANAKHYTCMIDLLGRAGRLDEALNLMKSMPFYP-DAATWGAL 579

Query: 178 LSACRLHGDVEVANQVGDKLFELEPDKSGPYILLANSYATSGKWDEFAQVRKKMKENNVR 357
           L A R+HGD E+  +  +K+FE+EPD SG Y+LL+N YA SG+W E  ++R KM++  V+
Sbjct: 580 LGASRIHGDTELGEKAAEKVFEMEPDNSGMYVLLSNLYAASGRWREVREMRSKMRDKGVK 639

Query: 358 KIPGYSQIEINGKSHKFVVGDKSHTDIKEIDSFLK 462
           K+PGYS +EI  K+H F VGD SH + + I ++L+
Sbjct: 640 KVPGYSWVEIQNKTHIFTVGDCSHPEAERIYAYLE 674


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