BLASTX nr result

ID: Lithospermum22_contig00045282 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00045282
         (264 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002325229.1| sodium transporter hkt1-like protein [Populu...    69   5e-10
gb|AAC62807.1| similar to potassium transport proteins [Arabidop...    59   3e-07
gb|AAF68393.1| sodium transporter [Arabidopsis thaliana]               58   9e-07
ref|NP_567354.1| sodium transporter HKT1 [Arabidopsis thaliana] ...    58   9e-07
gb|AFK46164.1| unknown [Lotus japonicus]                               58   9e-07

>ref|XP_002325229.1| sodium transporter hkt1-like protein [Populus trichocarpa]
           gi|222866663|gb|EEF03794.1| sodium transporter hkt1-like
           protein [Populus trichocarpa]
          Length = 506

 Score = 68.6 bits (166), Expect = 5e-10
 Identities = 43/94 (45%), Positives = 57/94 (60%), Gaps = 7/94 (7%)
 Frame = +3

Query: 3   TLEMEVFSNTQLIFMTILMLLGGEVFVSMLGLFLASF-----TTKEE--SQTMIDAFEMD 161
           T+EMEVFSNTQLI MTILMLLGGEVF S+LGL+L+ F      TKE   S    +  +  
Sbjct: 68  TVEMEVFSNTQLIIMTILMLLGGEVFTSILGLYLSRFKFSKHETKESRVSSVYHNPPKRT 127

Query: 162 YISSNELTQKSKNMVEIRTTSIEHDKKLKLKSIK 263
                E+ + +   +E    S+++D  LKL S+K
Sbjct: 128 NFPGLEIEKPTNVDLECNLNSLDNDHSLKLNSLK 161


>gb|AAC62807.1| similar to potassium transport proteins [Arabidopsis thaliana]
          Length = 458

 Score = 59.3 bits (142), Expect = 3e-07
 Identities = 27/48 (56%), Positives = 37/48 (77%)
 Frame = +3

Query: 3   TLEMEVFSNTQLIFMTILMLLGGEVFVSMLGLFLASFTTKEESQTMID 146
           T++MEVFSNTQLIF+TILM LGGE+F S L L+++ FT   E +  ++
Sbjct: 71  TVDMEVFSNTQLIFLTILMFLGGEIFTSFLNLYVSYFTNSIEDRCDVE 118


>gb|AAF68393.1| sodium transporter [Arabidopsis thaliana]
          Length = 506

 Score = 57.8 bits (138), Expect = 9e-07
 Identities = 26/38 (68%), Positives = 33/38 (86%)
 Frame = +3

Query: 3   TLEMEVFSNTQLIFMTILMLLGGEVFVSMLGLFLASFT 116
           T++MEVFSNTQLIF+TILM LGGE+F S L L+++ FT
Sbjct: 71  TVDMEVFSNTQLIFLTILMFLGGEIFTSFLNLYVSYFT 108


>ref|NP_567354.1| sodium transporter HKT1 [Arabidopsis thaliana]
           gi|75148222|sp|Q84TI7.1|HKT1_ARATH RecName: Full=Sodium
           transporter HKT1; Short=AtHKT1
           gi|28973679|gb|AAO64157.1| putative potassium uptake
           transporter [Arabidopsis thaliana]
           gi|110737059|dbj|BAF00483.1| sodium transporter
           [Arabidopsis thaliana] gi|332657466|gb|AEE82866.1|
           sodium transporter HKT1 [Arabidopsis thaliana]
          Length = 506

 Score = 57.8 bits (138), Expect = 9e-07
 Identities = 26/38 (68%), Positives = 33/38 (86%)
 Frame = +3

Query: 3   TLEMEVFSNTQLIFMTILMLLGGEVFVSMLGLFLASFT 116
           T++MEVFSNTQLIF+TILM LGGE+F S L L+++ FT
Sbjct: 71  TVDMEVFSNTQLIFLTILMFLGGEIFTSFLNLYVSYFT 108


>gb|AFK46164.1| unknown [Lotus japonicus]
          Length = 516

 Score = 57.8 bits (138), Expect = 9e-07
 Identities = 41/101 (40%), Positives = 56/101 (55%), Gaps = 15/101 (14%)
 Frame = +3

Query: 6   LEMEVFSNTQLIFMTILMLLGGEVFVSMLGLFLASFT-TKEESQTM---------IDAFE 155
           +EMEVFSN+QLI +T LMLLGGEVF SML L LA F  TK  S T+          +  E
Sbjct: 78  IEMEVFSNSQLILLTFLMLLGGEVFTSMLELVLARFNFTKNHSTTVQLKQDPPPKSNQIE 137

Query: 156 MDYIS-SNELTQKSKNMV----EIRTTSIEHDKKLKLKSIK 263
           +  +S SN  + K  + +         S  ++++LK  S+K
Sbjct: 138 IGLVSVSNSESHKQNHSILFVPNDMAESFNYNERLKYNSLK 178


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