BLASTX nr result

ID: Lithospermum22_contig00045204 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00045204
         (288 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI37820.3| unnamed protein product [Vitis vinifera]              147   7e-34
ref|XP_002278375.1| PREDICTED: pentatricopeptide repeat-containi...   147   7e-34
ref|XP_002521241.1| pentatricopeptide repeat-containing protein,...   147   9e-34
emb|CAN67319.1| hypothetical protein VITISV_039344 [Vitis vinifera]   147   9e-34
ref|XP_003637117.1| Pentatricopeptide repeat-containing protein,...   144   6e-33

>emb|CBI37820.3| unnamed protein product [Vitis vinifera]
          Length = 504

 Score =  147 bits (372), Expect = 7e-34
 Identities = 70/95 (73%), Positives = 82/95 (86%), Gaps = 1/95 (1%)
 Frame = -2

Query: 287 FDEMKFQRDVISWNAMIGGYASHGFASKALNLFESMK-FKVRPTYITFISVLNACAHAGL 111
           FDE+K Q++VISWNAMIGGYA HGFA+ AL LFE MK  KVRPTYITFISVLNACAHAG 
Sbjct: 312 FDEVKLQKEVISWNAMIGGYAFHGFAADALELFELMKRLKVRPTYITFISVLNACAHAGF 371

Query: 110 VEKARSYFKSMTSDFGIEPRVEHFASFVDVLGRYG 6
           V++ R +FKSM  +FGIEPR+EHFAS VD++GR+G
Sbjct: 372 VKEGRMHFKSMACEFGIEPRIEHFASLVDIVGRHG 406


>ref|XP_002278375.1| PREDICTED: pentatricopeptide repeat-containing protein At1g62260,
           mitochondrial [Vitis vinifera]
          Length = 681

 Score =  147 bits (372), Expect = 7e-34
 Identities = 70/95 (73%), Positives = 82/95 (86%), Gaps = 1/95 (1%)
 Frame = -2

Query: 287 FDEMKFQRDVISWNAMIGGYASHGFASKALNLFESMK-FKVRPTYITFISVLNACAHAGL 111
           FDE+K Q++VISWNAMIGGYA HGFA+ AL LFE MK  KVRPTYITFISVLNACAHAG 
Sbjct: 489 FDEVKLQKEVISWNAMIGGYAFHGFAADALELFELMKRLKVRPTYITFISVLNACAHAGF 548

Query: 110 VEKARSYFKSMTSDFGIEPRVEHFASFVDVLGRYG 6
           V++ R +FKSM  +FGIEPR+EHFAS VD++GR+G
Sbjct: 549 VKEGRMHFKSMACEFGIEPRIEHFASLVDIVGRHG 583


>ref|XP_002521241.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223539509|gb|EEF41097.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 662

 Score =  147 bits (371), Expect = 9e-34
 Identities = 70/95 (73%), Positives = 84/95 (88%), Gaps = 1/95 (1%)
 Frame = -2

Query: 287 FDEMKFQRDVISWNAMIGGYASHGFASKALNLFESMK-FKVRPTYITFISVLNACAHAGL 111
           F EMK Q++VISWNAMIGGYASHG+A++AL LF+ M+ FKV+PTYITFISVLNACAHAGL
Sbjct: 471 FYEMKLQKEVISWNAMIGGYASHGYATEALELFKLMRSFKVQPTYITFISVLNACAHAGL 530

Query: 110 VEKARSYFKSMTSDFGIEPRVEHFASFVDVLGRYG 6
           VE+ R  F+SM SD+G+EPRVEHFAS VD++GR G
Sbjct: 531 VEEGRRIFESMVSDYGVEPRVEHFASLVDIVGRQG 565


>emb|CAN67319.1| hypothetical protein VITISV_039344 [Vitis vinifera]
          Length = 761

 Score =  147 bits (371), Expect = 9e-34
 Identities = 70/95 (73%), Positives = 82/95 (86%), Gaps = 1/95 (1%)
 Frame = -2

Query: 287 FDEMKFQRDVISWNAMIGGYASHGFASKALNLFESMK-FKVRPTYITFISVLNACAHAGL 111
           FDE+K Q++VISWNAMIGGYA HGFA+ AL LFE MK  KVRPTYITFISVLNACAHAG 
Sbjct: 489 FDEVKLQKEVISWNAMIGGYAFHGFAADALELFELMKRLKVRPTYITFISVLNACAHAGX 548

Query: 110 VEKARSYFKSMTSDFGIEPRVEHFASFVDVLGRYG 6
           V++ R +FKSM  +FGIEPR+EHFAS VD++GR+G
Sbjct: 549 VKEGRMHFKSMACEFGIEPRIEHFASLVDIVGRHG 583


>ref|XP_003637117.1| Pentatricopeptide repeat-containing protein, partial [Medicago
           truncatula] gi|355503052|gb|AES84255.1|
           Pentatricopeptide repeat-containing protein, partial
           [Medicago truncatula]
          Length = 592

 Score =  144 bits (364), Expect = 6e-33
 Identities = 69/95 (72%), Positives = 81/95 (85%), Gaps = 1/95 (1%)
 Frame = -2

Query: 287 FDEMKFQRDVISWNAMIGGYASHGFASKALNLFESMK-FKVRPTYITFISVLNACAHAGL 111
           F+EMK  +DVI+WNAMIGGYA HGFA++AL LFE MK  K++PTYITFISVLNACAHAGL
Sbjct: 462 FNEMKLYKDVITWNAMIGGYAFHGFAAQALELFERMKGLKIQPTYITFISVLNACAHAGL 521

Query: 110 VEKARSYFKSMTSDFGIEPRVEHFASFVDVLGRYG 6
           VE+ +  F SM +D+GIEPRVEHFAS VD+LGR G
Sbjct: 522 VEEGKRQFNSMINDYGIEPRVEHFASLVDILGRQG 556


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