BLASTX nr result

ID: Lithospermum22_contig00045175 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00045175
         (302 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003631786.1| PREDICTED: pentatricopeptide repeat-containi...    69   3e-10
emb|CAN63320.1| hypothetical protein VITISV_026425 [Vitis vinifera]    69   3e-10
ref|XP_002516609.1| pentatricopeptide repeat-containing protein,...    66   3e-09

>ref|XP_003631786.1| PREDICTED: pentatricopeptide repeat-containing protein At1g12300,
           mitochondrial-like [Vitis vinifera]
          Length = 629

 Score = 69.3 bits (168), Expect = 3e-10
 Identities = 38/97 (39%), Positives = 53/97 (54%)
 Frame = -2

Query: 301 VLLNGMISLGRLKDGIFLVEEMCRSGFMPSFSMLSRLFKSAWXXXXXXXXXXXXXXXXXL 122
           +LL+GM S G L+   F  EEM RSGF+PSF+ L ++ K                    L
Sbjct: 15  ILLDGMTSTGNLRAAFFFAEEMWRSGFLPSFTSLLKILKKWLGLGSLVDSMSVFEFMLRL 74

Query: 121 SYFPSEHSLRMMILALSKCKLVGESYFLFLVLLEKRC 11
            YFP+E +L ++I  LSK  +  E++F+F VLL K C
Sbjct: 75  EYFPTEPTLNLLISMLSKAGMAREAHFVFRVLLGKGC 111


>emb|CAN63320.1| hypothetical protein VITISV_026425 [Vitis vinifera]
          Length = 722

 Score = 69.3 bits (168), Expect = 3e-10
 Identities = 38/97 (39%), Positives = 53/97 (54%)
 Frame = -2

Query: 301 VLLNGMISLGRLKDGIFLVEEMCRSGFMPSFSMLSRLFKSAWXXXXXXXXXXXXXXXXXL 122
           +LL+GM S G L+   F  EEM RSGF+PSF+ L ++ K                    L
Sbjct: 123 ILLDGMTSTGNLRAAFFFAEEMWRSGFLPSFTSLLKILKKWLGLGSLVDSMSVFEFMLRL 182

Query: 121 SYFPSEHSLRMMILALSKCKLVGESYFLFLVLLEKRC 11
            YFP+E +L ++I  LSK  +  E++F+F VLL K C
Sbjct: 183 EYFPTEPTLNLLISMLSKAGMAREAHFVFRVLLGKGC 219


>ref|XP_002516609.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223544429|gb|EEF45950.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 463

 Score = 65.9 bits (159), Expect = 3e-09
 Identities = 38/99 (38%), Positives = 54/99 (54%)
 Frame = -2

Query: 298 LLNGMISLGRLKDGIFLVEEMCRSGFMPSFSMLSRLFKSAWXXXXXXXXXXXXXXXXXLS 119
           LLNG +S   L+D IF++EEM  SGF+PSFS+LS+L K+                   L 
Sbjct: 16  LLNGFLSFRCLEDAIFILEEMRGSGFVPSFSILSKLLKNLLELKCLMDSIFVFEVMLTLG 75

Query: 118 YFPSEHSLRMMILALSKCKLVGESYFLFLVLLEKRCYDG 2
           Y PS+ +  +MI +L K  +  E+YF+F  L  K  + G
Sbjct: 76  YVPSKSTSNLMICSLCKAGMAREAYFVFSFLFNKGHFFG 114


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