BLASTX nr result

ID: Lithospermum22_contig00045153 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00045153
         (246 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004162331.1| PREDICTED: transcription initiation factor I...    80   1e-13
ref|XP_004143581.1| PREDICTED: transcription initiation factor I...    80   1e-13
ref|XP_003611972.1| Transcription initiation factor IIB [Medicag...    80   2e-13
ref|XP_003636246.1| Transcription initiation factor like protein...    80   2e-13
ref|XP_003636245.1| Transcription initiation factor like protein...    80   2e-13

>ref|XP_004162331.1| PREDICTED: transcription initiation factor IIB-like [Cucumis
           sativus]
          Length = 443

 Score = 80.5 bits (197), Expect = 1e-13
 Identities = 36/62 (58%), Positives = 40/62 (64%)
 Frame = +2

Query: 59  MQCPYCSGXXXXXXXXXXNRHISECATCLRVVSEYHTHPHHLFHLRAHDTPLCLVTSDLP 238
           M+CPYCS            + I+EC +C RVV E    PHHLFHLRA D PLCLVTSDLP
Sbjct: 1   MKCPYCSAAQGRCVTSSTGKSITECISCGRVVEERQFQPHHLFHLRAQDNPLCLVTSDLP 60

Query: 239 TP 244
           TP
Sbjct: 61  TP 62


>ref|XP_004143581.1| PREDICTED: transcription initiation factor IIB-like [Cucumis
           sativus]
          Length = 443

 Score = 80.5 bits (197), Expect = 1e-13
 Identities = 36/62 (58%), Positives = 40/62 (64%)
 Frame = +2

Query: 59  MQCPYCSGXXXXXXXXXXNRHISECATCLRVVSEYHTHPHHLFHLRAHDTPLCLVTSDLP 238
           M+CPYCS            + I+EC +C RVV E    PHHLFHLRA D PLCLVTSDLP
Sbjct: 1   MKCPYCSAAQGRCVTSSTGKSITECISCGRVVEERQFQPHHLFHLRAQDNPLCLVTSDLP 60

Query: 239 TP 244
           TP
Sbjct: 61  TP 62


>ref|XP_003611972.1| Transcription initiation factor IIB [Medicago truncatula]
           gi|358344389|ref|XP_003636272.1| Transcription
           initiation factor IIB [Medicago truncatula]
           gi|355502207|gb|AES83410.1| Transcription initiation
           factor IIB [Medicago truncatula]
           gi|355513307|gb|AES94930.1| Transcription initiation
           factor IIB [Medicago truncatula]
           gi|388496684|gb|AFK36408.1| unknown [Medicago
           truncatula]
          Length = 487

 Score = 80.1 bits (196), Expect = 2e-13
 Identities = 34/62 (54%), Positives = 40/62 (64%)
 Frame = +2

Query: 59  MQCPYCSGXXXXXXXXXXNRHISECATCLRVVSEYHTHPHHLFHLRAHDTPLCLVTSDLP 238
           M+CPYCS            + I+EC +C RVV E  +HPHH+FHLRA D PLCLVT DLP
Sbjct: 1   MKCPYCSAAQGRCTTTTTGKSITECTSCGRVVEERQSHPHHIFHLRAQDNPLCLVTPDLP 60

Query: 239 TP 244
            P
Sbjct: 61  PP 62


>ref|XP_003636246.1| Transcription initiation factor like protein [Medicago truncatula]
           gi|355502181|gb|AES83384.1| Transcription initiation
           factor like protein [Medicago truncatula]
          Length = 226

 Score = 80.1 bits (196), Expect = 2e-13
 Identities = 34/62 (54%), Positives = 40/62 (64%)
 Frame = +2

Query: 59  MQCPYCSGXXXXXXXXXXNRHISECATCLRVVSEYHTHPHHLFHLRAHDTPLCLVTSDLP 238
           M+CPYCS            + I+EC +C RVV E  +HPHH+FHLRA D PLCLVT DLP
Sbjct: 1   MKCPYCSAAQGRCTTTTTGKSITECTSCGRVVEERQSHPHHIFHLRAQDNPLCLVTPDLP 60

Query: 239 TP 244
            P
Sbjct: 61  PP 62


>ref|XP_003636245.1| Transcription initiation factor like protein [Medicago truncatula]
           gi|355502180|gb|AES83383.1| Transcription initiation
           factor like protein [Medicago truncatula]
          Length = 124

 Score = 80.1 bits (196), Expect = 2e-13
 Identities = 34/62 (54%), Positives = 40/62 (64%)
 Frame = +2

Query: 59  MQCPYCSGXXXXXXXXXXNRHISECATCLRVVSEYHTHPHHLFHLRAHDTPLCLVTSDLP 238
           M+CPYCS            + I+EC +C RVV E  +HPHH+FHLRA D PLCLVT DLP
Sbjct: 1   MKCPYCSAAQGRCTTTTTGKSITECTSCGRVVEERQSHPHHIFHLRAQDNPLCLVTPDLP 60

Query: 239 TP 244
            P
Sbjct: 61  PP 62


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