BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00045152
         (307 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABD32279.2| reverse transcriptase, putative [Medicago truncat...    79   4e-13
gb|ABD28670.2| RNA-directed DNA polymerase (Reverse transcriptas...    75   5e-12
gb|ABE87589.2| RNA-directed DNA polymerase (Reverse transcriptas...    73   2e-11
gb|AAT38805.1| hypothetical protein SDM1_47t00008 [Solanum demis...    69   5e-10
gb|AAC78274.1| putative reverse transcriptase [Arabidopsis thali...    67   1e-09

>gb|ABD32279.2| reverse transcriptase, putative [Medicago truncatula]
          Length = 480

 Score = 79.0 bits (193), Expect = 4e-13
 Identities = 36/101 (35%), Positives = 61/101 (60%)
 Frame = +2

Query: 2   LAFADDCLLFCNGLKSSLDQIMGFLDHYQSVSGQVINHQKSSCIVSDKLSVTRVSVVLRA 181
           + +ADD L+FC G K ++  ++ F + Y  VS Q+IN+ KS    +  ++ +   ++   
Sbjct: 154 ILYADDVLIFCAGTKQNIRCLLKFFNDYSEVSAQIINNNKSQ-FYAGAMTTSHSQMIAGT 212

Query: 182 TGFKTESLPFTYLGIPIFKGKKQCFLFQSLLDQIRNAVSSW 304
            GF  +++PF YLG PIFKGK +   FQS++D+I+   + W
Sbjct: 213 LGFSADNIPFFYLGCPIFKGKLKGIYFQSIVDRIKVKFAIW 253


>gb|ABD28670.2| RNA-directed DNA polymerase (Reverse transcriptase) [Medicago
           truncatula]
          Length = 642

 Score = 75.1 bits (183), Expect = 5e-12
 Identities = 37/99 (37%), Positives = 58/99 (58%)
 Frame = +2

Query: 8   FADDCLLFCNGLKSSLDQIMGFLDHYQSVSGQVINHQKSSCIVSDKLSVTRVSVVLRATG 187
           + DD ++FC    SSL  +      Y   SGQ++N +KS  I +  ++ TR++ ++   G
Sbjct: 428 YVDDLMVFCKAKMSSLIVLKSLFTRYADCSGQIMNIRKSF-IFAGGITDTRMNNIVNILG 486

Query: 188 FKTESLPFTYLGIPIFKGKKQCFLFQSLLDQIRNAVSSW 304
           F   SLPFTYLG PIFKGK +   FQ + D+++  ++ W
Sbjct: 487 FNVGSLPFTYLGAPIFKGKPKGIHFQPIADKVKAKLAKW 525


>gb|ABE87589.2| RNA-directed DNA polymerase (Reverse transcriptase); Ribonuclease
           H; Endonuclease/exonuclease/phosphatase [Medicago
           truncatula]
          Length = 1246

 Score = 73.2 bits (178), Expect = 2e-11
 Identities = 38/92 (41%), Positives = 56/92 (60%), Gaps = 1/92 (1%)
 Frame = +2

Query: 2   LAFADDCLLFCNGLKSSLDQIMGFLDHYQSVSGQVINHQKSSCIVSDKLSVTRVSVVLRA 181
           + +ADD L+FC G K ++ +++     Y  VSGQ+IN+ KS    S  ++ +RV ++   
Sbjct: 691 ILYADDVLIFCTGTKRNIRRLIKIFSQYSEVSGQLINNAKSRFFTS-AMTGSRVQMISSL 749

Query: 182 TGFKTESLPFTYLGIPIFKGK-KQCFLFQSLL 274
            GF   SLPFTYLG PIF+GK K C +   +L
Sbjct: 750 LGFNVGSLPFTYLGCPIFRGKPKVCTVSWKIL 781


>gb|AAT38805.1| hypothetical protein SDM1_47t00008 [Solanum demissum]
          Length = 1155

 Score = 68.6 bits (166), Expect = 5e-10
 Identities = 33/98 (33%), Positives = 51/98 (52%)
 Frame = +2

Query: 11  ADDCLLFCNGLKSSLDQIMGFLDHYQSVSGQVINHQKSSCIVSDKLSVTRVSVVLRATGF 190
           +DD +LFCNG K +L+  +  L  Y++ SGQ+IN  KS   V++      ++ +   T  
Sbjct: 603 SDDTILFCNGSKETLEMFLRTLHIYENTSGQLINKNKSCFSVANNAKQNFIAKIKLITCM 662

Query: 191 KTESLPFTYLGIPIFKGKKQCFLFQSLLDQIRNAVSSW 304
             +  P  YLG P+  GKK+   F  L+  I N +  W
Sbjct: 663 NHQEFPIKYLGCPLISGKKKTSHFNELVKNIINRIKGW 700


>gb|AAC78274.1| putative reverse transcriptase [Arabidopsis thaliana]
          Length = 543

 Score = 67.4 bits (163), Expect = 1e-09
 Identities = 38/101 (37%), Positives = 60/101 (59%)
 Frame = +2

Query: 2   LAFADDCLLFCNGLKSSLDQIMGFLDHYQSVSGQVINHQKSSCIVSDKLSVTRVSVVLRA 181
           L+FADD L+FC+G  SSL  I+  LD ++  SG  IN QK++ ++ D  +  R  ++  +
Sbjct: 242 LSFADDILVFCDGSLSSLVAILDILDVFKKGSGLGINLQKTALLL-DGGNFERNRIMAAS 300

Query: 182 TGFKTESLPFTYLGIPIFKGKKQCFLFQSLLDQIRNAVSSW 304
            G    SLP  YLG+P+   K +   +Q L+D+I +  +SW
Sbjct: 301 LGVSQGSLPVRYLGVPLMSQKMKKHDYQPLVDRINSRFTSW 341