BLASTX nr result

ID: Lithospermum22_contig00045132 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00045132
         (342 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAT39295.1| Probable origin recognition complex subunit 6, pu...   114   6e-24
gb|ABO93015.1| putative origin-recognition complex subunit 6 [So...   114   8e-24
gb|AAT38715.1| Probable origin recognition complex subunit 6, pu...   114   8e-24
gb|AAU93586.1| Probable origin recognition complex subunit 6, pu...   108   4e-22
ref|XP_003613742.1| Origin recognition complex subunit [Medicago...   100   1e-19

>gb|AAT39295.1| Probable origin recognition complex subunit 6, putative [Solanum
           demissum]
          Length = 284

 Score =  114 bits (286), Expect = 6e-24
 Identities = 66/122 (54%), Positives = 82/122 (67%), Gaps = 9/122 (7%)
 Frame = -3

Query: 340 HKLKVDKIKLIELCGTXXXXXXXXXXSMNDICFDVFGISREKKVTKAVKGNRGLTE---- 173
           HKLKVDK+KLIELCGT          SMND+CFDVFG ++EKK  KAVKGNR L +    
Sbjct: 154 HKLKVDKMKLIELCGTSEPEFANVSTSMNDLCFDVFGTAKEKKDPKAVKGNRELLDALPE 213

Query: 172 --KSLDEGYSSDDEKTSPSKKRKREEEDSYEDWKATVLDS-NKNNIKV--QDKQVRLDVF 8
             +  D GYSS+D+ +S  KKRKR +E +YE+WK+TVL S N+++ K   Q KQ RLD  
Sbjct: 214 KRRVEDGGYSSEDDNSSAYKKRKRMDEHAYEEWKSTVLASKNQSSQKAPKQTKQARLDFM 273

Query: 7   LK 2
            K
Sbjct: 274 KK 275


>gb|ABO93015.1| putative origin-recognition complex subunit 6 [Solanum tuberosum]
          Length = 284

 Score =  114 bits (285), Expect = 8e-24
 Identities = 66/122 (54%), Positives = 81/122 (66%), Gaps = 9/122 (7%)
 Frame = -3

Query: 340 HKLKVDKIKLIELCGTXXXXXXXXXXSMNDICFDVFGISREKKVTKAVKGNRGLTE---- 173
           HKLKVDK+KLIELCGT          SMND+CFDVFG S+EKK  K VKGNR L +    
Sbjct: 154 HKLKVDKMKLIELCGTSEPEFANVSTSMNDLCFDVFGTSKEKKDPKTVKGNRELLDALPE 213

Query: 172 --KSLDEGYSSDDEKTSPSKKRKREEEDSYEDWKATVLDS-NKNNIKV--QDKQVRLDVF 8
             +  D GYSS+D+ +S  KKRKR +E +YE+WK+TVL S N+++ K   Q KQ RLD  
Sbjct: 214 KRRVEDGGYSSEDDNSSAYKKRKRMDEHAYEEWKSTVLASKNQSSQKAPKQTKQARLDFM 273

Query: 7   LK 2
            K
Sbjct: 274 KK 275


>gb|AAT38715.1| Probable origin recognition complex subunit 6, putative [Solanum
           demissum] gi|47824989|gb|AAT38762.1| Probable origin
           recognition complex subunit 6, putative [Solanum
           demissum]
          Length = 301

 Score =  114 bits (285), Expect = 8e-24
 Identities = 66/122 (54%), Positives = 81/122 (66%), Gaps = 9/122 (7%)
 Frame = -3

Query: 340 HKLKVDKIKLIELCGTXXXXXXXXXXSMNDICFDVFGISREKKVTKAVKGNRGLTE---- 173
           HKLKVDK+KLIELCGT          SMND+CFDVFG S+EKK  K VKGNR L +    
Sbjct: 171 HKLKVDKMKLIELCGTSEPEFANVSTSMNDLCFDVFGTSKEKKDPKTVKGNRELLDALPE 230

Query: 172 --KSLDEGYSSDDEKTSPSKKRKREEEDSYEDWKATVLDS-NKNNIKV--QDKQVRLDVF 8
             +  D GYSS+D+ +S  KKRKR +E +YE+WK+TVL S N+++ K   Q KQ RLD  
Sbjct: 231 KRRVEDGGYSSEDDNSSAYKKRKRMDEHAYEEWKSTVLASKNQSSQKAPKQTKQARLDFM 290

Query: 7   LK 2
            K
Sbjct: 291 KK 292


>gb|AAU93586.1| Probable origin recognition complex subunit 6, putative [Solanum
           demissum] gi|142942423|gb|ABO92997.1| putative
           origin-recognition complex subunit 6 [Solanum tuberosum]
          Length = 284

 Score =  108 bits (270), Expect = 4e-22
 Identities = 64/122 (52%), Positives = 82/122 (67%), Gaps = 9/122 (7%)
 Frame = -3

Query: 340 HKLKVDKIKLIELCGTXXXXXXXXXXSMNDICFDVFGISREKKVTKAVKGNRGLTE---- 173
           HKLKVDK+KLIELCGT          SMND+CFDVFG S+EKK  K VKGNR L +    
Sbjct: 154 HKLKVDKMKLIELCGTSEPEFASVSTSMNDLCFDVFGTSKEKKDPKIVKGNRELLDALPE 213

Query: 172 -KSLDEG-YSSDDEKTSPSKKRKREEEDSYEDWKATVLDS-NKNNIKV--QDKQVRLDVF 8
            + +++G YSS+D+ +S  KK KR +E +YE+WK+TVL S N+++ K   Q KQ RLD  
Sbjct: 214 KRRVEDGDYSSEDDNSSAYKKCKRMDEHAYEEWKSTVLASKNQSSQKAPKQTKQARLDFM 273

Query: 7   LK 2
            K
Sbjct: 274 KK 275


>ref|XP_003613742.1| Origin recognition complex subunit [Medicago truncatula]
           gi|355515077|gb|AES96700.1| Origin recognition complex
           subunit [Medicago truncatula]
          Length = 287

 Score =  100 bits (249), Expect = 1e-19
 Identities = 60/120 (50%), Positives = 74/120 (61%), Gaps = 11/120 (9%)
 Frame = -3

Query: 340 HKLKVDKIKLIELCGTXXXXXXXXXXSMNDICFDVFGISREKKVTKAVKGNRGLTE---- 173
           HKLKVDKIKLIELCGT          +M D+C DVFG+++EKK  K VK NR L +    
Sbjct: 154 HKLKVDKIKLIELCGTSESEFSSVSTTMKDLCHDVFGVAKEKKDPKEVKTNRDLLDVLPS 213

Query: 172 --KSLDEGYSSDD-EKTSPSKKRKREEEDSYEDWKATVLDSNKNNIK----VQDKQVRLD 14
             K+ D GY SDD E+ S  KKRK+ E   YE WK++VL SNK + K     + KQ RL+
Sbjct: 214 KRKAEDGGYLSDDGEEVSSYKKRKQMETKDYEKWKSSVLTSNKQDKKEVPSKKPKQTRLN 273


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