BLASTX nr result
ID: Lithospermum22_contig00045120
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lithospermum22_contig00045120
(475 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CBI39579.3| unnamed protein product [Vitis vinifera] 229 1e-58
ref|XP_002278152.1| PREDICTED: pentatricopeptide repeat-containi... 229 1e-58
ref|XP_003535324.1| PREDICTED: pentatricopeptide repeat-containi... 222 2e-56
ref|XP_003591206.1| Pentatricopeptide repeat-containing protein ... 216 2e-54
ref|XP_002330193.1| predicted protein [Populus trichocarpa] gi|2... 213 1e-53
>emb|CBI39579.3| unnamed protein product [Vitis vinifera]
Length = 459
Score = 229 bits (585), Expect = 1e-58
Identities = 104/157 (66%), Positives = 128/157 (81%)
Frame = +3
Query: 3 VVSWNTMISGLALSGRDKEALGLFNEMCDEGLEPDEASIVTILPVCARSGEVEIGRWIHS 182
VVSWN+MI+GL SGRD EAL LF EM D G EPD+A++VTILPVCAR G V++G WIHS
Sbjct: 178 VVSWNSMIAGLEQSGRDGEALELFREMWDHGFEPDDATVVTILPVCARLGAVDVGEWIHS 237
Query: 183 YVKSKELYRSFVSIGNALVDFYCKCGDLENAFAVFQDMPNKNVITWNAMISGLAFNGEGD 362
Y +S L R F+S+GN+LVDFYCKCG LE A+ VF +MP KNV++WNAMISGL FNG+G+
Sbjct: 238 YAESSRLLRDFISVGNSLVDFYCKCGILETAWRVFNEMPQKNVVSWNAMISGLTFNGKGE 297
Query: 363 HGVILFEDMVRGGMTPNKSTFVGVLACCAHAGLVQKG 473
G LFE+M+ G+ PN +TFVGVL+CCAHAGLV++G
Sbjct: 298 LGADLFEEMINKGVRPNDATFVGVLSCCAHAGLVERG 334
Score = 95.9 bits (237), Expect = 3e-18
Identities = 55/159 (34%), Positives = 88/159 (55%), Gaps = 5/159 (3%)
Frame = +3
Query: 12 WNTMISGLALSGRDKEALGLFNEMCDEGLEPDEASIVTILPVCARSGEVEIGRWIHSYVK 191
+N+MI G +L G + +L LF++M + G+ PDE + +L C+ + IG+ +H V
Sbjct: 75 FNSMIKGYSLCGPSENSLLLFSQMKNRGIWPDEFTFAPLLKSCSGICDNRIGKGVHGVVI 134
Query: 192 SKELYRSFVSIGNALVDFYCKCGDLENAFAVF-----QDMPNKNVITWNAMISGLAFNGE 356
R F SI ++D Y CG +E+A VF +DM +++V++WN+MI+GL +G
Sbjct: 135 VVGFER-FSSIRIGIIDLYTSCGRMEDAKKVFDEMLDRDMRDRSVVSWNSMIAGLEQSGR 193
Query: 357 GDHGVILFEDMVRGGMTPNKSTFVGVLACCAHAGLVQKG 473
+ LF +M G P+ +T V +L CA G V G
Sbjct: 194 DGEALELFREMWDHGFEPDDATVVTILPVCARLGAVDVG 232
Score = 72.4 bits (176), Expect = 4e-11
Identities = 39/131 (29%), Positives = 69/131 (52%), Gaps = 1/131 (0%)
Frame = +3
Query: 3 VVSWNTMISGLALSGRDKEALGLFNEMCDEGLEPDEASIVTILPVCARSGEVEIGRWIHS 182
VVSWN MISGL +G+ + LF EM ++G+ P++A+ V +L CA +G VE GR + +
Sbjct: 280 VVSWNAMISGLTFNGKGELGADLFEEMINKGVRPNDATFVGVLSCCAHAGLVERGRNLFT 339
Query: 183 YVKSKELYRSFVSIGNALVDFYCKCGDLENAFAVFQDMPNK-NVITWNAMISGLAFNGEG 359
+ + +VD + G +E A + + MP + N + W +++S G+
Sbjct: 340 SMTVDHKMEPKLEHFGCMVDLLARNGCMEEARDLVRTMPMRPNAVLWGSLLSAYRTIGDV 399
Query: 360 DHGVILFEDMV 392
H ++++
Sbjct: 400 KHAECAVKELI 410
>ref|XP_002278152.1| PREDICTED: pentatricopeptide repeat-containing protein At1g09190
[Vitis vinifera]
Length = 485
Score = 229 bits (585), Expect = 1e-58
Identities = 104/157 (66%), Positives = 128/157 (81%)
Frame = +3
Query: 3 VVSWNTMISGLALSGRDKEALGLFNEMCDEGLEPDEASIVTILPVCARSGEVEIGRWIHS 182
VVSWN+MI+GL SGRD EAL LF EM D G EPD+A++VTILPVCAR G V++G WIHS
Sbjct: 204 VVSWNSMIAGLEQSGRDGEALELFREMWDHGFEPDDATVVTILPVCARLGAVDVGEWIHS 263
Query: 183 YVKSKELYRSFVSIGNALVDFYCKCGDLENAFAVFQDMPNKNVITWNAMISGLAFNGEGD 362
Y +S L R F+S+GN+LVDFYCKCG LE A+ VF +MP KNV++WNAMISGL FNG+G+
Sbjct: 264 YAESSRLLRDFISVGNSLVDFYCKCGILETAWRVFNEMPQKNVVSWNAMISGLTFNGKGE 323
Query: 363 HGVILFEDMVRGGMTPNKSTFVGVLACCAHAGLVQKG 473
G LFE+M+ G+ PN +TFVGVL+CCAHAGLV++G
Sbjct: 324 LGADLFEEMINKGVRPNDATFVGVLSCCAHAGLVERG 360
Score = 83.6 bits (205), Expect = 2e-14
Identities = 55/185 (29%), Positives = 86/185 (46%), Gaps = 31/185 (16%)
Frame = +3
Query: 12 WNTMISGLALSGRDKEALGLFNEMCDEGLEPDEASIVTILPVCARSGEVEIGRWIHSYVK 191
+N+MI G +L G + +L LF++M + G+ PDE + +L C+ + IG+ +H V
Sbjct: 75 FNSMIKGYSLCGPSENSLLLFSQMKNRGIWPDEFTFAPLLKSCSGICDNRIGKGVHGVVI 134
Query: 192 SKELYRSFVSIGNALVDFYCKCGDLENAFAVFQDMPNKNVITWN---------------- 323
R F SI ++D Y CG +E+A VF +M +++VI WN
Sbjct: 135 VVGFER-FSSIRIGIIDLYTSCGRMEDAKKVFDEMLDRDVIVWNMMIRGFCKVGDIEMGF 193
Query: 324 ---------------AMISGLAFNGEGDHGVILFEDMVRGGMTPNKSTFVGVLACCAHAG 458
+MI+GL +G + LF +M G P+ +T V +L CA G
Sbjct: 194 RLFRQMRDRSVVSWNSMIAGLEQSGRDGEALELFREMWDHGFEPDDATVVTILPVCARLG 253
Query: 459 LVQKG 473
V G
Sbjct: 254 AVDVG 258
Score = 72.4 bits (176), Expect = 4e-11
Identities = 39/131 (29%), Positives = 69/131 (52%), Gaps = 1/131 (0%)
Frame = +3
Query: 3 VVSWNTMISGLALSGRDKEALGLFNEMCDEGLEPDEASIVTILPVCARSGEVEIGRWIHS 182
VVSWN MISGL +G+ + LF EM ++G+ P++A+ V +L CA +G VE GR + +
Sbjct: 306 VVSWNAMISGLTFNGKGELGADLFEEMINKGVRPNDATFVGVLSCCAHAGLVERGRNLFT 365
Query: 183 YVKSKELYRSFVSIGNALVDFYCKCGDLENAFAVFQDMPNK-NVITWNAMISGLAFNGEG 359
+ + +VD + G +E A + + MP + N + W +++S G+
Sbjct: 366 SMTVDHKMEPKLEHFGCMVDLLARNGCMEEARDLVRTMPMRPNAVLWGSLLSAYRTIGDV 425
Query: 360 DHGVILFEDMV 392
H ++++
Sbjct: 426 KHAECAVKELI 436
>ref|XP_003535324.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g09190-like [Glycine max]
Length = 483
Score = 222 bits (566), Expect = 2e-56
Identities = 100/157 (63%), Positives = 129/157 (82%)
Frame = +3
Query: 3 VVSWNTMISGLALSGRDKEALGLFNEMCDEGLEPDEASIVTILPVCARSGEVEIGRWIHS 182
VVSWN M+S LA + ++++AL LFNEM ++G EPD+AS+VT+LPVCAR G V+IG WIHS
Sbjct: 203 VVSWNLMMSCLAKNNKEEKALELFNEMLEQGFEPDDASLVTVLPVCARLGAVDIGEWIHS 262
Query: 183 YVKSKELYRSFVSIGNALVDFYCKCGDLENAFAVFQDMPNKNVITWNAMISGLAFNGEGD 362
Y SK + +++GN+LVDFYCKCG+L+ A+++F DM +KNV++WNAMISGLA+NGEG+
Sbjct: 263 YANSKGFLQDTINVGNSLVDFYCKCGNLQAAWSIFNDMASKNVVSWNAMISGLAYNGEGE 322
Query: 363 HGVILFEDMVRGGMTPNKSTFVGVLACCAHAGLVQKG 473
GV LFE+MV GG PN STFVGVLACCAH GLV +G
Sbjct: 323 VGVNLFEEMVHGGFEPNDSTFVGVLACCAHVGLVDRG 359
Score = 70.1 bits (170), Expect = 2e-10
Identities = 42/132 (31%), Positives = 66/132 (50%), Gaps = 1/132 (0%)
Frame = +3
Query: 3 VVSWNTMISGLALSGRDKEALGLFNEMCDEGLEPDEASIVTILPVCARSGEVEIGRWIHS 182
VVSWN MISGLA +G + + LF EM G EP++++ V +L CA G V+ GR + +
Sbjct: 305 VVSWNAMISGLAYNGEGEVGVNLFEEMVHGGFEPNDSTFVGVLACCAHVGLVDRGRDLFA 364
Query: 183 YVKSKELYRSFVSIGNALVDFYCKCGDLENAFAVFQDMPNK-NVITWNAMISGLAFNGEG 359
+ K + +VD +CG + A + MP K W A++S G+
Sbjct: 365 SMSVKFKVSPKLEHYGCVVDLLGRCGHVREARDLITSMPLKPTAALWGALLSACRTYGDR 424
Query: 360 DHGVILFEDMVR 395
+ +++VR
Sbjct: 425 EIAENAAKELVR 436
Score = 69.3 bits (168), Expect = 3e-10
Identities = 49/187 (26%), Positives = 83/187 (44%), Gaps = 30/187 (16%)
Frame = +3
Query: 3 VVSWNTMISGLALSGRDKEALGLFNEMCDEGLEPDEASIVT-----------ILPVCARS 149
++ +N +I +L + F+ M + PDE ++ +L C +
Sbjct: 71 ILLFNAIIKAHSLHPPFHASFSFFSLMKTRAISPDEYTLAPLFKSASNLRYYVLGGCVHA 130
Query: 150 GEVEIGRWIHSYVK--SKELYRSFVSIGNA-----------------LVDFYCKCGDLEN 272
V +G H+ V+ + E+Y S +G+A ++ +CK GDLE
Sbjct: 131 HVVRLGFTRHASVRVAALEVYASCERMGDASKVFDEMRDPDVVVWNLMIRGFCKMGDLET 190
Query: 273 AFAVFQDMPNKNVITWNAMISGLAFNGEGDHGVILFEDMVRGGMTPNKSTFVGVLACCAH 452
VF M + V++WN M+S LA N + + + LF +M+ G P+ ++ V VL CA
Sbjct: 191 GMKVFGQMKERTVVSWNLMMSCLAKNNKEEKALELFNEMLEQGFEPDDASLVTVLPVCAR 250
Query: 453 AGLVQKG 473
G V G
Sbjct: 251 LGAVDIG 257
>ref|XP_003591206.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355480254|gb|AES61457.1| Pentatricopeptide
repeat-containing protein [Medicago truncatula]
Length = 490
Score = 216 bits (549), Expect = 2e-54
Identities = 100/157 (63%), Positives = 122/157 (77%)
Frame = +3
Query: 3 VVSWNTMISGLALSGRDKEALGLFNEMCDEGLEPDEASIVTILPVCARSGEVEIGRWIHS 182
VVSWN MIS LA +D EA G+F EM ++G EPD+A++VT+LPVCAR G+V+ G WIHS
Sbjct: 205 VVSWNLMISCLAQRKKDGEAFGIFREMLEQGFEPDDATLVTVLPVCARLGDVDAGEWIHS 264
Query: 183 YVKSKELYRSFVSIGNALVDFYCKCGDLENAFAVFQDMPNKNVITWNAMISGLAFNGEGD 362
Y K L R +S+GN+LVDFYCKCG+LE A+ VF +M KNV++WNAMISGL NG+G+
Sbjct: 265 YADGKGLLRKVISVGNSLVDFYCKCGNLEAAWKVFNEMTKKNVVSWNAMISGLGLNGKGE 324
Query: 363 HGVILFEDMVRGGMTPNKSTFVGVLACCAHAGLVQKG 473
GV LFE M R G+TP+ STFVGVLACCAHAG V KG
Sbjct: 325 LGVELFEKMARKGVTPSDSTFVGVLACCAHAGFVDKG 361
Score = 77.0 bits (188), Expect = 1e-12
Identities = 42/132 (31%), Positives = 73/132 (55%), Gaps = 1/132 (0%)
Frame = +3
Query: 3 VVSWNTMISGLALSGRDKEALGLFNEMCDEGLEPDEASIVTILPVCARSGEVEIGRWIHS 182
VVSWN MISGL L+G+ + + LF +M +G+ P +++ V +L CA +G V+ GR I
Sbjct: 307 VVSWNAMISGLGLNGKGELGVELFEKMARKGVTPSDSTFVGVLACCAHAGFVDKGREIFD 366
Query: 183 YVKSKELYRSFVSIGNALVDFYCKCGDLENAFAVFQDMP-NKNVITWNAMISGLAFNGEG 359
+ K + +VD +CG ++ A+ + ++MP N W A++S +G+
Sbjct: 367 SMTVKFKLSPKLEHYGCVVDLLGRCGHVKEAYDLIRNMPLMPNAALWGALLSACRTHGDR 426
Query: 360 DHGVILFEDMVR 395
+ I +++VR
Sbjct: 427 EVAEIAAKELVR 438
Score = 63.9 bits (154), Expect = 1e-08
Identities = 36/118 (30%), Positives = 61/118 (51%)
Frame = +3
Query: 120 VTILPVCARSGEVEIGRWIHSYVKSKELYRSFVSIGNALVDFYCKCGDLENAFAVFQDMP 299
+ +L V + G++E + + +E V + N +++ +CK GDLE +F+ M
Sbjct: 147 IGLLEVYSNCGKMEDANKVFDEMLHRE-----VVVWNIMINGFCKMGDLEIGLKLFKRMG 201
Query: 300 NKNVITWNAMISGLAFNGEGDHGVILFEDMVRGGMTPNKSTFVGVLACCAHAGLVQKG 473
++V++WN MIS LA + +F +M+ G P+ +T V VL CA G V G
Sbjct: 202 QRSVVSWNLMISCLAQRKKDGEAFGIFREMLEQGFEPDDATLVTVLPVCARLGDVDAG 259
>ref|XP_002330193.1| predicted protein [Populus trichocarpa] gi|222871649|gb|EEF08780.1|
predicted protein [Populus trichocarpa]
Length = 485
Score = 213 bits (543), Expect = 1e-53
Identities = 100/157 (63%), Positives = 123/157 (78%)
Frame = +3
Query: 3 VVSWNTMISGLALSGRDKEALGLFNEMCDEGLEPDEASIVTILPVCARSGEVEIGRWIHS 182
VVSWN MIS LA S RD EALGLF++M D G +PDEA++VT+LP+CAR G V++G+WIHS
Sbjct: 204 VVSWNIMISCLAQSRRDSEALGLFHDMLDWGFKPDEATVVTVLPICARLGSVDVGKWIHS 263
Query: 183 YVKSKELYRSFVSIGNALVDFYCKCGDLENAFAVFQDMPNKNVITWNAMISGLAFNGEGD 362
Y KS LYR FV++GNALVDFY K G E A VF +MP KNVI+WN +ISGLA NG G+
Sbjct: 264 YAKSSGLYRDFVAVGNALVDFYNKSGMFETARRVFDEMPRKNVISWNTLISGLALNGNGE 323
Query: 363 HGVILFEDMVRGGMTPNKSTFVGVLACCAHAGLVQKG 473
GV L E+M+ G+ PN +TFVGVL+CCAHAGL ++G
Sbjct: 324 LGVELLEEMMNEGVRPNDATFVGVLSCCAHAGLFERG 360
Score = 91.3 bits (225), Expect = 7e-17
Identities = 55/188 (29%), Positives = 90/188 (47%), Gaps = 31/188 (16%)
Frame = +3
Query: 3 VVSWNTMISGLALSGRDKEALGLFNEMCDEGLEPDEASIVTILPVCARSGEVEIGRWIHS 182
++ +N MI G +L+G +E+ LF+ M + G+ PDE ++ +L C+ G +++G+ +H
Sbjct: 72 IILFNAMIKGYSLNGPFEESFRLFSSMKNRGIWPDEYTLAPLLKACSSLGVLQLGKCMHK 131
Query: 183 YVKSKELYRSFVSIGNALVDFYCKCGDLENAFAVFQDMPNKNVITWNAMISGLAFNGEGD 362
V + F +I +++ Y CG +E+A VF +M ++VI WN MI G G+ D
Sbjct: 132 EVLVVG-FEGFSAIRIGVIELYSSCGVMEDAEKVFDEMYQRDVIVWNLMIHGFCKRGDVD 190
Query: 363 HGVI-------------------------------LFEDMVRGGMTPNKSTFVGVLACCA 449
G+ LF DM+ G P+++T V VL CA
Sbjct: 191 MGLCLFRQMRKRSVVSWNIMISCLAQSRRDSEALGLFHDMLDWGFKPDEATVVTVLPICA 250
Query: 450 HAGLVQKG 473
G V G
Sbjct: 251 RLGSVDVG 258
Score = 69.3 bits (168), Expect = 3e-10
Identities = 40/133 (30%), Positives = 73/133 (54%), Gaps = 3/133 (2%)
Frame = +3
Query: 3 VVSWNTMISGLALSGRDKEALGLFNEMCDEGLEPDEASIVTILPVCARSGEVEIGR-WIH 179
V+SWNT+ISGLAL+G + + L EM +EG+ P++A+ V +L CA +G E GR +
Sbjct: 306 VISWNTLISGLALNGNGELGVELLEEMMNEGVRPNDATFVGVLSCCAHAGLFERGRELLA 365
Query: 180 SYVKSKELYRSFVSIGNALVDFYCKCGDLENAFAVFQDMPN--KNVITWNAMISGLAFNG 353
S V+ ++ G +VD + G + A+ + + MP N W +++S +G
Sbjct: 366 SMVEHHQIEPKLEHYG-CMVDLLGRSGCVREAYDLIRIMPGGAPNAALWGSLLSACRTHG 424
Query: 354 EGDHGVILFEDMV 392
+ + + ++++
Sbjct: 425 DVELAHLAVKELI 437