BLASTX nr result

ID: Lithospermum22_contig00045100 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00045100
         (374 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI21158.3| unnamed protein product [Vitis vinifera]              124   8e-27
ref|XP_002283376.1| PREDICTED: ubiquitin carboxyl-terminal hydro...   124   8e-27
ref|XP_002309685.1| predicted protein [Populus trichocarpa] gi|2...   118   4e-25
ref|XP_002515408.1| Ubiquitin carboxyl-terminal hydrolase, putat...   117   8e-25
ref|XP_004145492.1| PREDICTED: ubiquitin carboxyl-terminal hydro...   116   2e-24

>emb|CBI21158.3| unnamed protein product [Vitis vinifera]
          Length = 529

 Score =  124 bits (311), Expect = 8e-27
 Identities = 62/122 (50%), Positives = 78/122 (63%)
 Frame = -3

Query: 372 NPEPCKHLANYKVKYGLSGFNMIQKYVKTTPYGKTMIDKSKFENEISLVCCSVCKVSEGR 193
           NP+PCKHLA+YK+++GL+GF  +Q  +KTTPYG+T + K K E       CS+C   +GR
Sbjct: 10  NPKPCKHLADYKLRHGLNGFKTLQNCLKTTPYGRTSVSKHKSETPR----CSLCFGYQGR 65

Query: 192 FLIXXXXXXXXXXXXSGESNHALLHSKSESGHEIVVDMERAELYCCVCCDQVYDPDFDSV 13
                             S+HA  HS+S  GHEI VD+ERAELYCCVC DQVYDPDFD  
Sbjct: 66  LYFCLICSSITC------SSHANEHSQSHHGHEIAVDVERAELYCCVCRDQVYDPDFDRA 119

Query: 12  VM 7
           V+
Sbjct: 120 VV 121


>ref|XP_002283376.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 22-like [Vitis
           vinifera]
          Length = 553

 Score =  124 bits (311), Expect = 8e-27
 Identities = 62/122 (50%), Positives = 78/122 (63%)
 Frame = -3

Query: 372 NPEPCKHLANYKVKYGLSGFNMIQKYVKTTPYGKTMIDKSKFENEISLVCCSVCKVSEGR 193
           NP+PCKHLA+YK+++GL+GF  +Q  +KTTPYG+T + K K E       CS+C   +GR
Sbjct: 10  NPKPCKHLADYKLRHGLNGFKTLQNCLKTTPYGRTSVSKHKSETPR----CSLCFGYQGR 65

Query: 192 FLIXXXXXXXXXXXXSGESNHALLHSKSESGHEIVVDMERAELYCCVCCDQVYDPDFDSV 13
                             S+HA  HS+S  GHEI VD+ERAELYCCVC DQVYDPDFD  
Sbjct: 66  LYFCLICSSITC------SSHANEHSQSHHGHEIAVDVERAELYCCVCRDQVYDPDFDRA 119

Query: 12  VM 7
           V+
Sbjct: 120 VV 121


>ref|XP_002309685.1| predicted protein [Populus trichocarpa] gi|222855661|gb|EEE93208.1|
           predicted protein [Populus trichocarpa]
          Length = 519

 Score =  118 bits (296), Expect = 4e-25
 Identities = 59/123 (47%), Positives = 79/123 (64%), Gaps = 1/123 (0%)
 Frame = -3

Query: 372 NPEPCKHLANYKVKYGLSGFNMIQKYVKTTPYGKTMIDKSKFENEISLVCCSVCK-VSEG 196
           NP+PCKHL +YK+++GLSG+  +QK++KT P GKT I       E  +  CS C  + +G
Sbjct: 10  NPKPCKHLTDYKLRHGLSGYKFLQKWLKTFPNGKTSIKMC----ETKMPKCSFCSGIRQG 65

Query: 195 RFLIXXXXXXXXXXXXSGESNHALLHSKSESGHEIVVDMERAELYCCVCCDQVYDPDFDS 16
           R  +               S+H LLHS+SE+GH+I VD+ER+ELYCC C DQVYD DFD 
Sbjct: 66  RLFLCLICSSMSC------SDHTLLHSQSENGHDIAVDIERSELYCCSCSDQVYDLDFDK 119

Query: 15  VVM 7
           VV+
Sbjct: 120 VVV 122


>ref|XP_002515408.1| Ubiquitin carboxyl-terminal hydrolase, putative [Ricinus communis]
           gi|223545352|gb|EEF46857.1| Ubiquitin carboxyl-terminal
           hydrolase, putative [Ricinus communis]
          Length = 551

 Score =  117 bits (294), Expect = 8e-25
 Identities = 58/122 (47%), Positives = 80/122 (65%)
 Frame = -3

Query: 372 NPEPCKHLANYKVKYGLSGFNMIQKYVKTTPYGKTMIDKSKFENEISLVCCSVCKVSEGR 193
           NP+ CKHLA+YK+++GLSG+  +Q  +KTTP G T + KS    +  +  CS CK  +GR
Sbjct: 10  NPKLCKHLADYKLRHGLSGYKFLQNCLKTTPSGITSVYKS----DTKIPRCSFCKGYQGR 65

Query: 192 FLIXXXXXXXXXXXXSGESNHALLHSKSESGHEIVVDMERAELYCCVCCDQVYDPDFDSV 13
           F +               S+H LLH++SE+ H+I VD+ER+ELYC +C DQVYDPDFD V
Sbjct: 66  FFMCLICSSISC------SSHTLLHAQSENSHDIAVDIERSELYCSLCSDQVYDPDFDKV 119

Query: 12  VM 7
           V+
Sbjct: 120 VV 121


>ref|XP_004145492.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 22-like [Cucumis
           sativus] gi|449515075|ref|XP_004164575.1| PREDICTED:
           ubiquitin carboxyl-terminal hydrolase 22-like [Cucumis
           sativus]
          Length = 552

 Score =  116 bits (290), Expect = 2e-24
 Identities = 58/122 (47%), Positives = 74/122 (60%)
 Frame = -3

Query: 372 NPEPCKHLANYKVKYGLSGFNMIQKYVKTTPYGKTMIDKSKFENEISLVCCSVCKVSEGR 193
           NP PC HLA+YK++YGL+G+  IQ ++KT+P G+T I       +  L  C  C   +GR
Sbjct: 10  NPTPCNHLADYKLRYGLNGYKSIQNHLKTSPNGRTSIQNP----DSKLPRCGSCDGYKGR 65

Query: 192 FLIXXXXXXXXXXXXSGESNHALLHSKSESGHEIVVDMERAELYCCVCCDQVYDPDFDSV 13
             I               SNH LLH +SE+GH++ VD+ERAELYC  C DQVYDPDFD  
Sbjct: 66  LYICLICASISC------SNHTLLHYQSENGHDLAVDVERAELYCYACSDQVYDPDFDRT 119

Query: 12  VM 7
           VM
Sbjct: 120 VM 121


Top