BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00045054
         (378 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAC63678.1| putative non-LTR retroelement reverse transcripta...    96   6e-21
dbj|BAB09379.1| non-LTR retroelement reverse transcriptase-like ...    95   1e-20
gb|AAC33226.1| putative non-LTR retroelement reverse transcripta...    99   3e-20
dbj|BAF01687.1| hypothetical protein [Arabidopsis thaliana]            85   2e-19
dbj|BAA97290.1| non-LTR retroelement reverse transcriptase-like ...    85   2e-19

>gb|AAC63678.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
           thaliana]
          Length = 1216

 Score = 96.3 bits (238), Expect(2) = 6e-21
 Identities = 47/102 (46%), Positives = 69/102 (67%), Gaps = 1/102 (0%)
 Frame = +3

Query: 3   TAYVTGKNISDGILLVQELVCGYHKKTGRPRCALKVDIMKAYDTMCWSFLWSVMKALNYP 182
           +A+V  + + + +LL  ELV  YHK +   RCA+K+DI KA+D++ WSFL  V+ A+N+P
Sbjct: 284 SAFVKDRLLIENVLLATELVKDYHKDSISTRCAMKIDISKAFDSLQWSFLTHVLAAMNFP 343

Query: 183 IRFIELVKACVTTAWFSVSVNDSLQDHFKSSRGLRHGI-LSP 305
             FI  +  C++TA FS+ VN  L  +F+S+RGLR G  LSP
Sbjct: 344 GEFIHWISLCMSTASFSIQVNGELAGYFRSARGLRQGCSLSP 385



 Score = 29.3 bits (64), Expect(2) = 6e-21
 Identities = 13/29 (44%), Positives = 18/29 (62%), Gaps = 3/29 (10%)
 Frame = +2

Query: 299 LSPYIFILVMDCFTEMLQ---SQRDFEYH 376
           LSPY+F++ MD  + ML      R+F YH
Sbjct: 383 LSPYLFVISMDVLSRMLDKAAGAREFGYH 411


>dbj|BAB09379.1| non-LTR retroelement reverse transcriptase-like protein
           [Arabidopsis thaliana]
          Length = 1223

 Score = 95.1 bits (235), Expect(2) = 1e-20
 Identities = 49/102 (48%), Positives = 66/102 (64%), Gaps = 1/102 (0%)
 Frame = +3

Query: 3   TAYVTGKNISDGILLVQELVCGYHKKTGRPRCALKVDIMKAYDTMCWSFLWSVMKALNYP 182
           +A+V  + + + +LL  ELV  YHK T   RCA+K+DI KA+D++ W FL +V   L +P
Sbjct: 563 SAFVKDRLLIENLLLATELVKDYHKDTISTRCAIKIDISKAFDSVQWPFLINVFTILGFP 622

Query: 183 IRFIELVKACVTTAWFSVSVNDSLQDHFKSSRGLRHG-ILSP 305
             FI  +  C+TTA FSV VN  L  +F+SSRGLR G  LSP
Sbjct: 623 REFIHWINICITTASFSVQVNGELAGYFQSSRGLRQGCALSP 664



 Score = 29.3 bits (64), Expect(2) = 1e-20
 Identities = 13/29 (44%), Positives = 19/29 (65%), Gaps = 3/29 (10%)
 Frame = +2

Query: 299 LSPYIFILVMDCFTEMLQ---SQRDFEYH 376
           LSPY+F++ MD  ++ML    + R F YH
Sbjct: 662 LSPYLFVICMDVLSKMLDKAAAARHFGYH 690


>gb|AAC33226.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
            thaliana]
          Length = 1529

 Score = 98.6 bits (244), Expect(2) = 3e-20
 Identities = 49/102 (48%), Positives = 69/102 (67%), Gaps = 1/102 (0%)
 Frame = +3

Query: 3    TAYVTGKNISDGILLVQELVCGYHKKTGRPRCALKVDIMKAYDTMCWSFLWSVMKALNYP 182
            +A+V  + + + +LL  ELV  YHK++  PRCA+K+DI KA+D++ W FL + ++ALN+P
Sbjct: 860  SAFVKERLLMENVLLATELVKDYHKESVTPRCAMKIDISKAFDSVQWQFLLNTLEALNFP 919

Query: 183  IRFIELVKACVTTAWFSVSVNDSLQDHFKSSRGLRHG-ILSP 305
              F   +K C++TA FSV VN  L   F SSRGLR G  LSP
Sbjct: 920  ETFRHWIKLCISTATFSVQVNGELAGFFGSSRGLRQGCALSP 961



 Score = 24.6 bits (52), Expect(2) = 3e-20
 Identities = 10/29 (34%), Positives = 17/29 (58%), Gaps = 3/29 (10%)
 Frame = +2

Query: 299  LSPYIFILVMDCFTEMLQS---QRDFEYH 376
            LSPY+F++ M+  + M+      R+  YH
Sbjct: 959  LSPYLFVICMNVLSHMIDEAAVHRNIGYH 987


>dbj|BAF01687.1| hypothetical protein [Arabidopsis thaliana]
          Length = 1072

 Score = 84.7 bits (208), Expect(2) = 2e-19
 Identities = 37/97 (38%), Positives = 66/97 (68%)
 Frame = +3

Query: 3   TAYVTGKNISDGILLVQELVCGYHKKTGRPRCALKVDIMKAYDTMCWSFLWSVMKALNYP 182
           +A++ G+++++ +LL  E+V GY++    PR  LKVD+ KA+D++ W F+ + ++AL  P
Sbjct: 417 SAFLPGRSLAENVLLATEMVHGYNRLNISPRGMLKVDLKKAFDSVKWEFVTAALRALAIP 476

Query: 183 IRFIELVKACVTTAWFSVSVNDSLQDHFKSSRGLRHG 293
            R+I  +  C+TT  F++SVN +    F+S++GLR G
Sbjct: 477 ERYINWIHQCITTPSFTISVNGATGGFFRSTKGLRQG 513



 Score = 35.8 bits (81), Expect(2) = 2e-19
 Identities = 14/27 (51%), Positives = 21/27 (77%)
 Frame = +2

Query: 293 DPLSPYIFILVMDCFTEMLQSQRDFEY 373
           DPLSPY+F+L M+ F+++L S+ D  Y
Sbjct: 514 DPLSPYLFVLAMEVFSKLLYSRYDSGY 540


>dbj|BAA97290.1| non-LTR retroelement reverse transcriptase-like [Arabidopsis
           thaliana]
          Length = 1072

 Score = 84.7 bits (208), Expect(2) = 2e-19
 Identities = 37/97 (38%), Positives = 66/97 (68%)
 Frame = +3

Query: 3   TAYVTGKNISDGILLVQELVCGYHKKTGRPRCALKVDIMKAYDTMCWSFLWSVMKALNYP 182
           +A++ G+++++ +LL  E+V GY++    PR  LKVD+ KA+D++ W F+ + ++AL  P
Sbjct: 417 SAFLPGRSLAENVLLATEMVHGYNRLNISPRGMLKVDLKKAFDSVKWEFVTAALRALAIP 476

Query: 183 IRFIELVKACVTTAWFSVSVNDSLQDHFKSSRGLRHG 293
            R+I  +  C+TT  F++SVN +    F+S++GLR G
Sbjct: 477 ERYINWIHQCITTPSFTISVNGATGGFFRSTKGLRQG 513



 Score = 35.8 bits (81), Expect(2) = 2e-19
 Identities = 14/27 (51%), Positives = 21/27 (77%)
 Frame = +2

Query: 293 DPLSPYIFILVMDCFTEMLQSQRDFEY 373
           DPLSPY+F+L M+ F+++L S+ D  Y
Sbjct: 514 DPLSPYLFVLAMEVFSKLLYSRYDSGY 540