BLASTX nr result
ID: Lithospermum22_contig00044946
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Lithospermum22_contig00044946 (217 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_003633738.1| PREDICTED: pentatricopeptide repeat-containi... 80 1e-13 emb|CAN82481.1| hypothetical protein VITISV_012747 [Vitis vinifera] 80 1e-13 ref|XP_002531188.1| pentatricopeptide repeat-containing protein,... 77 2e-12 ref|XP_002305195.1| predicted protein [Populus trichocarpa] gi|2... 73 2e-11 ref|XP_002887023.1| pentatricopeptide repeat-containing protein ... 71 8e-11 >ref|XP_003633738.1| PREDICTED: pentatricopeptide repeat-containing protein At1g66345, mitochondrial-like [Vitis vinifera] Length = 547 Score = 80.5 bits (197), Expect = 1e-13 Identities = 36/56 (64%), Positives = 43/56 (76%) Frame = +2 Query: 41 KSDRCSLLWGVYEHMIENRKRPNESTVKILVDGLCKEGRLQKFLDMLDRILGKRCS 208 KSD L+W +YEHMI RK PNE +V +++ LCKEG LQKF+DMLDRI GKRCS Sbjct: 203 KSDNYPLVWKIYEHMIRVRKYPNEVSVSVMISALCKEGALQKFVDMLDRIHGKRCS 258 >emb|CAN82481.1| hypothetical protein VITISV_012747 [Vitis vinifera] Length = 642 Score = 80.5 bits (197), Expect = 1e-13 Identities = 36/56 (64%), Positives = 43/56 (76%) Frame = +2 Query: 41 KSDRCSLLWGVYEHMIENRKRPNESTVKILVDGLCKEGRLQKFLDMLDRILGKRCS 208 KSD L+W +YEHMI RK PNE +V +++ LCKEG LQKF+DMLDRI GKRCS Sbjct: 203 KSDNYPLVWKIYEHMIRVRKYPNEVSVSVMISALCKEGALQKFVDMLDRIHGKRCS 258 >ref|XP_002531188.1| pentatricopeptide repeat-containing protein, putative [Ricinus communis] gi|223529229|gb|EEF31203.1| pentatricopeptide repeat-containing protein, putative [Ricinus communis] Length = 619 Score = 76.6 bits (187), Expect = 2e-12 Identities = 32/55 (58%), Positives = 44/55 (80%) Frame = +2 Query: 41 KSDRCSLLWGVYEHMIENRKRPNESTVKILVDGLCKEGRLQKFLDMLDRILGKRC 205 KSD+ L+W +YEHMI R PNE+T++ +++ LCKEG+LQ F+D+LDRI GKRC Sbjct: 211 KSDQYPLVWKIYEHMIHKRIYPNEATIRTMINALCKEGKLQMFVDILDRIHGKRC 265 >ref|XP_002305195.1| predicted protein [Populus trichocarpa] gi|222848159|gb|EEE85706.1| predicted protein [Populus trichocarpa] Length = 556 Score = 73.2 bits (178), Expect = 2e-11 Identities = 30/56 (53%), Positives = 42/56 (75%) Frame = +2 Query: 41 KSDRCSLLWGVYEHMIENRKRPNESTVKILVDGLCKEGRLQKFLDMLDRILGKRCS 208 KSD+ L W +YEHM+ R PNE+T++ ++ LCKEG+LQ ++MLD+I GKRCS Sbjct: 210 KSDKSPLAWKIYEHMLHRRTYPNEATIESMISALCKEGKLQTIVNMLDKIHGKRCS 265 >ref|XP_002887023.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata subsp. lyrata] gi|297332864|gb|EFH63282.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata subsp. lyrata] Length = 539 Score = 71.2 bits (173), Expect = 8e-11 Identities = 30/55 (54%), Positives = 43/55 (78%) Frame = +2 Query: 41 KSDRCSLLWGVYEHMIENRKRPNESTVKILVDGLCKEGRLQKFLDMLDRILGKRC 205 KS+R L+W +YE I+ R PNE+T++I++ LCKEGRL++ +D+LDRI GKRC Sbjct: 205 KSNRVDLVWRIYEFAIDKRIYPNETTIRIMISVLCKEGRLKEVVDLLDRIYGKRC 259