BLASTX nr result

ID: Lithospermum22_contig00044946 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00044946
         (217 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003633738.1| PREDICTED: pentatricopeptide repeat-containi...    80   1e-13
emb|CAN82481.1| hypothetical protein VITISV_012747 [Vitis vinifera]    80   1e-13
ref|XP_002531188.1| pentatricopeptide repeat-containing protein,...    77   2e-12
ref|XP_002305195.1| predicted protein [Populus trichocarpa] gi|2...    73   2e-11
ref|XP_002887023.1| pentatricopeptide repeat-containing protein ...    71   8e-11

>ref|XP_003633738.1| PREDICTED: pentatricopeptide repeat-containing protein At1g66345,
           mitochondrial-like [Vitis vinifera]
          Length = 547

 Score = 80.5 bits (197), Expect = 1e-13
 Identities = 36/56 (64%), Positives = 43/56 (76%)
 Frame = +2

Query: 41  KSDRCSLLWGVYEHMIENRKRPNESTVKILVDGLCKEGRLQKFLDMLDRILGKRCS 208
           KSD   L+W +YEHMI  RK PNE +V +++  LCKEG LQKF+DMLDRI GKRCS
Sbjct: 203 KSDNYPLVWKIYEHMIRVRKYPNEVSVSVMISALCKEGALQKFVDMLDRIHGKRCS 258


>emb|CAN82481.1| hypothetical protein VITISV_012747 [Vitis vinifera]
          Length = 642

 Score = 80.5 bits (197), Expect = 1e-13
 Identities = 36/56 (64%), Positives = 43/56 (76%)
 Frame = +2

Query: 41  KSDRCSLLWGVYEHMIENRKRPNESTVKILVDGLCKEGRLQKFLDMLDRILGKRCS 208
           KSD   L+W +YEHMI  RK PNE +V +++  LCKEG LQKF+DMLDRI GKRCS
Sbjct: 203 KSDNYPLVWKIYEHMIRVRKYPNEVSVSVMISALCKEGALQKFVDMLDRIHGKRCS 258


>ref|XP_002531188.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223529229|gb|EEF31203.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 619

 Score = 76.6 bits (187), Expect = 2e-12
 Identities = 32/55 (58%), Positives = 44/55 (80%)
 Frame = +2

Query: 41  KSDRCSLLWGVYEHMIENRKRPNESTVKILVDGLCKEGRLQKFLDMLDRILGKRC 205
           KSD+  L+W +YEHMI  R  PNE+T++ +++ LCKEG+LQ F+D+LDRI GKRC
Sbjct: 211 KSDQYPLVWKIYEHMIHKRIYPNEATIRTMINALCKEGKLQMFVDILDRIHGKRC 265


>ref|XP_002305195.1| predicted protein [Populus trichocarpa] gi|222848159|gb|EEE85706.1|
           predicted protein [Populus trichocarpa]
          Length = 556

 Score = 73.2 bits (178), Expect = 2e-11
 Identities = 30/56 (53%), Positives = 42/56 (75%)
 Frame = +2

Query: 41  KSDRCSLLWGVYEHMIENRKRPNESTVKILVDGLCKEGRLQKFLDMLDRILGKRCS 208
           KSD+  L W +YEHM+  R  PNE+T++ ++  LCKEG+LQ  ++MLD+I GKRCS
Sbjct: 210 KSDKSPLAWKIYEHMLHRRTYPNEATIESMISALCKEGKLQTIVNMLDKIHGKRCS 265


>ref|XP_002887023.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata] gi|297332864|gb|EFH63282.1|
           pentatricopeptide repeat-containing protein [Arabidopsis
           lyrata subsp. lyrata]
          Length = 539

 Score = 71.2 bits (173), Expect = 8e-11
 Identities = 30/55 (54%), Positives = 43/55 (78%)
 Frame = +2

Query: 41  KSDRCSLLWGVYEHMIENRKRPNESTVKILVDGLCKEGRLQKFLDMLDRILGKRC 205
           KS+R  L+W +YE  I+ R  PNE+T++I++  LCKEGRL++ +D+LDRI GKRC
Sbjct: 205 KSNRVDLVWRIYEFAIDKRIYPNETTIRIMISVLCKEGRLKEVVDLLDRIYGKRC 259


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