BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00044879
         (233 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|BAF01687.1| hypothetical protein [Arabidopsis thaliana]            57   2e-06
dbj|BAA97290.1| non-LTR retroelement reverse transcriptase-like ...    57   2e-06
gb|AAC28221.1| similar to reverse transcriptases (PFam: rvt.hmm,...    56   3e-06
gb|AAG50806.1|AC079281_8 unknown protein [Arabidopsis thaliana]        55   5e-06
gb|AAF79658.1|AC025416_32 F5O11.4 [Arabidopsis thaliana]               55   5e-06

>dbj|BAF01687.1| hypothetical protein [Arabidopsis thaliana]
          Length = 1072

 Score = 57.0 bits (136), Expect = 2e-06
 Identities = 21/52 (40%), Positives = 35/52 (67%)
 Frame = +2

Query: 14  RLKRAEFWEIPEKNTDSWTWRGLLYLREMLKPYVKYHIGNGSSVNYFYDNWS 169
           RL  A FW++    TD WTW+ LL LR + + ++K  +GNG +V++++D W+
Sbjct: 763 RLGHASFWQVNALQTDPWTWKMLLNLRPLAEKFIKAKVGNGGTVSFWFDCWT 814


>dbj|BAA97290.1| non-LTR retroelement reverse transcriptase-like [Arabidopsis
           thaliana]
          Length = 1072

 Score = 57.0 bits (136), Expect = 2e-06
 Identities = 21/52 (40%), Positives = 35/52 (67%)
 Frame = +2

Query: 14  RLKRAEFWEIPEKNTDSWTWRGLLYLREMLKPYVKYHIGNGSSVNYFYDNWS 169
           RL  A FW++    TD WTW+ LL LR + + ++K  +GNG +V++++D W+
Sbjct: 763 RLGHASFWQVNALQTDPWTWKMLLNLRPLAEKFIKAKVGNGGTVSFWFDCWT 814


>gb|AAC28221.1| similar to reverse transcriptases (PFam: rvt.hmm, score: 60.13)
           [Arabidopsis thaliana]
          Length = 1164

 Score = 55.8 bits (133), Expect = 3e-06
 Identities = 20/50 (40%), Positives = 33/50 (66%)
 Frame = +2

Query: 20  KRAEFWEIPEKNTDSWTWRGLLYLREMLKPYVKYHIGNGSSVNYFYDNWS 169
           K   FW  PEK  DSW W+ LL LR + + +++ ++GNG   ++++DNW+
Sbjct: 803 KSTSFWNQPEKPHDSWNWKCLLRLRVVAERFIRCNVGNGRDASFWFDNWT 852


>gb|AAG50806.1|AC079281_8 unknown protein [Arabidopsis thaliana]
          Length = 1213

 Score = 55.5 bits (132), Expect = 5e-06
 Identities = 21/51 (41%), Positives = 31/51 (60%)
 Frame = +2

Query: 17   LKRAEFWEIPEKNTDSWTWRGLLYLREMLKPYVKYHIGNGSSVNYFYDNWS 169
            L R  FW +    +DSWTW+ LL LR +   ++   +GNG   +Y+YDNW+
Sbjct: 904  LSRGSFWAVEGGQSDSWTWKRLLSLRPLAHQFLVCKVGNGLKADYWYDNWT 954


>gb|AAF79658.1|AC025416_32 F5O11.4 [Arabidopsis thaliana]
          Length = 975

 Score = 55.5 bits (132), Expect = 5e-06
 Identities = 21/50 (42%), Positives = 34/50 (68%)
 Frame = +2

Query: 20  KRAEFWEIPEKNTDSWTWRGLLYLREMLKPYVKYHIGNGSSVNYFYDNWS 169
           K   FW  PEK +DSW W+ LL LR + + +V+  IG+G + ++++DNW+
Sbjct: 737 KSTSFWNQPEKPSDSWNWKCLLRLRCLAENFVRCKIGDGKTASFWFDNWT 786