BLASTX nr result

ID: Lithospermum22_contig00044870 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00044870
         (292 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAG51496.1|AC069471_27 ATP-dependent RNA helicase, putative [...   107   1e-21
ref|NP_564296.1| helicase associated domain-containing protein [...   107   1e-21
ref|XP_002514958.1| ATP-dependent RNA helicase, putative [Ricinu...   101   7e-20
ref|XP_004143044.1| PREDICTED: ATP-dependent RNA helicase dhx8-l...   100   2e-19
ref|XP_002314547.1| predicted protein [Populus trichocarpa] gi|2...    98   6e-19

>gb|AAG51496.1|AC069471_27 ATP-dependent RNA helicase, putative [Arabidopsis thaliana]
          Length = 708

 Score =  107 bits (266), Expect = 1e-21
 Identities = 53/59 (89%), Positives = 57/59 (96%)
 Frame = +1

Query: 103 LPILQYEDQIVETVEKNPVVVIIGETGSGKSTQLSQILHRHGYTTSGVIAVTQPRRVAA 279
           LPILQ+E++IVETVEKN VVVIIGETGSGKSTQLSQILHRHGYT SGVIA+TQPRRVAA
Sbjct: 4   LPILQFEEKIVETVEKNSVVVIIGETGSGKSTQLSQILHRHGYTKSGVIAITQPRRVAA 62


>ref|NP_564296.1| helicase associated domain-containing protein [Arabidopsis
           thaliana] gi|15451224|gb|AAK96883.1| ATP-dependent RNA
           helicase, putative [Arabidopsis thaliana]
           gi|22136080|gb|AAM91118.1| ATP-dependent RNA helicase,
           putative [Arabidopsis thaliana]
           gi|332192768|gb|AEE30889.1| helicase associated
           domain-containing protein [Arabidopsis thaliana]
          Length = 700

 Score =  107 bits (266), Expect = 1e-21
 Identities = 53/59 (89%), Positives = 57/59 (96%)
 Frame = +1

Query: 103 LPILQYEDQIVETVEKNPVVVIIGETGSGKSTQLSQILHRHGYTTSGVIAVTQPRRVAA 279
           LPILQ+E++IVETVEKN VVVIIGETGSGKSTQLSQILHRHGYT SGVIA+TQPRRVAA
Sbjct: 4   LPILQFEEKIVETVEKNSVVVIIGETGSGKSTQLSQILHRHGYTKSGVIAITQPRRVAA 62


>ref|XP_002514958.1| ATP-dependent RNA helicase, putative [Ricinus communis]
           gi|223546009|gb|EEF47512.1| ATP-dependent RNA helicase,
           putative [Ricinus communis]
          Length = 702

 Score =  101 bits (251), Expect = 7e-20
 Identities = 47/59 (79%), Positives = 56/59 (94%)
 Frame = +1

Query: 103 LPILQYEDQIVETVEKNPVVVIIGETGSGKSTQLSQILHRHGYTTSGVIAVTQPRRVAA 279
           LPI+Q+ED+I++TVE+NPVVVIIGETGSGKSTQLSQ+LHR GYT SG+I +TQPRRVAA
Sbjct: 4   LPIIQFEDKIIKTVEENPVVVIIGETGSGKSTQLSQMLHRRGYTKSGIIGITQPRRVAA 62


>ref|XP_004143044.1| PREDICTED: ATP-dependent RNA helicase dhx8-like [Cucumis sativus]
           gi|449494554|ref|XP_004159579.1| PREDICTED:
           ATP-dependent RNA helicase dhx8-like [Cucumis sativus]
          Length = 702

 Score = 99.8 bits (247), Expect = 2e-19
 Identities = 48/60 (80%), Positives = 56/60 (93%)
 Frame = +1

Query: 100 KLPILQYEDQIVETVEKNPVVVIIGETGSGKSTQLSQILHRHGYTTSGVIAVTQPRRVAA 279
           +LPILQ+E++I+ETVE+N VVVIIGETGSGKSTQLSQ+LHR GYT SG+I VTQPRRVAA
Sbjct: 3   QLPILQFEEKIIETVEQNQVVVIIGETGSGKSTQLSQMLHRRGYTKSGIIGVTQPRRVAA 62


>ref|XP_002314547.1| predicted protein [Populus trichocarpa] gi|222863587|gb|EEF00718.1|
           predicted protein [Populus trichocarpa]
          Length = 699

 Score = 98.2 bits (243), Expect = 6e-19
 Identities = 48/59 (81%), Positives = 55/59 (93%)
 Frame = +1

Query: 103 LPILQYEDQIVETVEKNPVVVIIGETGSGKSTQLSQILHRHGYTTSGVIAVTQPRRVAA 279
           LPI+Q+ED+I++TVE N VVVIIGETGSGKSTQLSQ+LHR GYT SG+IAVTQPRRVAA
Sbjct: 5   LPIVQFEDKIMKTVEDNAVVVIIGETGSGKSTQLSQMLHRRGYTKSGIIAVTQPRRVAA 63


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