BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00044838
         (327 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|BAB10743.1| retroelement pol polyprotein-like [Arabidopsis t...    79   5e-13
emb|CAA18107.1| LTR retrotransposon like protein [Arabidopsis th...    79   5e-13
gb|AAG50751.1|AC079733_19 polyprotein, putative [Arabidopsis tha...    78   7e-13
emb|CAN64502.1| hypothetical protein VITISV_020342 [Vitis vinifera]    78   9e-13
gb|ABM05483.1| LTR retrotransposon-like protein [Rhodiola fastig...    77   2e-12

>dbj|BAB10743.1| retroelement pol polyprotein-like [Arabidopsis thaliana]
          Length = 1109

 Score = 78.6 bits (192), Expect = 5e-13
 Identities = 33/75 (44%), Positives = 54/75 (72%)
 Frame = +1

Query: 103 LTDYGFNQSFNDHCMFVLDQDGVFMKLIVYVDDKLVAGSLQEKIIKVKQFLHNEFTIKDF 282
           L  YGF QS +D+ +F  + DGVF+ ++VYVDD +++GS  + + + K +L + F +KD 
Sbjct: 763 LKQYGFTQSLSDYSLFSYNNDGVFVHVLVYVDDLIISGSCPDAVAQFKSYLESCFHMKDL 822

Query: 283 GIAKYFLGIQIARSA 327
           G+ KYFLGI+++R+A
Sbjct: 823 GLLKYFLGIEVSRNA 837


>emb|CAA18107.1| LTR retrotransposon like protein [Arabidopsis thaliana]
           gi|7269049|emb|CAB79159.1| LTR retrotransposon like
           protein [Arabidopsis thaliana]
          Length = 1109

 Score = 78.6 bits (192), Expect = 5e-13
 Identities = 33/75 (44%), Positives = 54/75 (72%)
 Frame = +1

Query: 103 LTDYGFNQSFNDHCMFVLDQDGVFMKLIVYVDDKLVAGSLQEKIIKVKQFLHNEFTIKDF 282
           L  YGF QS +D+ +F  + DGVF+ ++VYVDD +++GS  + + + K +L + F +KD 
Sbjct: 763 LKQYGFTQSLSDYSLFSYNNDGVFVHVLVYVDDLIISGSCPDAVAQFKSYLESCFHMKDL 822

Query: 283 GIAKYFLGIQIARSA 327
           G+ KYFLGI+++R+A
Sbjct: 823 GLLKYFLGIEVSRNA 837


>gb|AAG50751.1|AC079733_19 polyprotein, putative [Arabidopsis thaliana]
          Length = 1468

 Score = 78.2 bits (191), Expect = 7e-13
 Identities = 32/75 (42%), Positives = 54/75 (72%)
 Frame = +1

Query: 103  LTDYGFNQSFNDHCMFVLDQDGVFMKLIVYVDDKLVAGSLQEKIIKVKQFLHNEFTIKDF 282
            L  YGF QS +D+ +F  + DG+F+ ++VYVDD +++GS  + + + K +L + F +KD 
Sbjct: 1122 LKQYGFTQSLSDYSLFSYNNDGIFVHVLVYVDDLIISGSCPDAVAQFKSYLESCFHMKDL 1181

Query: 283  GIAKYFLGIQIARSA 327
            G+ KYFLGI+++R+A
Sbjct: 1182 GLLKYFLGIEVSRNA 1196


>emb|CAN64502.1| hypothetical protein VITISV_020342 [Vitis vinifera]
          Length = 660

 Score = 77.8 bits (190), Expect = 9e-13
 Identities = 38/89 (42%), Positives = 57/89 (64%)
 Frame = +1

Query: 61  KMAGQRENINTCYRLTDYGFNQSFNDHCMFVLDQDGVFMKLIVYVDDKLVAGSLQEKIIK 240
           + A ++ N      L  +GFNQ+ +D  +F+      F+ L++YVDD ++A +  ++I  
Sbjct: 447 RQASRQWNSKLSSSLLKFGFNQAKSDSSLFIRQTSTSFIALLIYVDDVIIASNDLKEIDV 506

Query: 241 VKQFLHNEFTIKDFGIAKYFLGIQIARSA 327
           VK+FLH  FTIKD G  KYFLGI++ARSA
Sbjct: 507 VKRFLHESFTIKDLGELKYFLGIEVARSA 535


>gb|ABM05483.1| LTR retrotransposon-like protein [Rhodiola fastigiata]
          Length = 383

 Score = 76.6 bits (187), Expect = 2e-12
 Identities = 34/74 (45%), Positives = 49/74 (66%)
 Frame = +1

Query: 103 LTDYGFNQSFNDHCMFVLDQDGVFMKLIVYVDDKLVAGSLQEKIIKVKQFLHNEFTIKDF 282
           L  +GF  S ND+ +F  ++DGVF+ L+VYVDD ++ G+    I  VK ++H+ F IKD 
Sbjct: 51  LIKFGFTSSLNDYSLFTYNKDGVFLALLVYVDDVIITGTSHSLIQSVKSYIHDLFRIKDL 110

Query: 283 GIAKYFLGIQIARS 324
           G  +YFLG + ARS
Sbjct: 111 GQLRYFLGFEAARS 124